RNA–Protein interactions for RNA: ENST00000568428.5

SCAPER-220, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-220ENST00000568428 POM121Q96HA1 1249 aa9.48□□□□□ -0.89
SCAPER-220ENST00000568428 CDCA7Q9BWT1 371 aaPredicted RBP9.48□□□□□ -0.89
SCAPER-220ENST00000568428 CHIC2Q9UKJ5 165 aa9.48□□□□□ -0.89
SCAPER-220ENST00000568428 ATP5J2-PTCD1G3V325 749 aa9.47□□□□□ -0.89
SCAPER-220ENST00000568428 PPFIA3O75145 1194 aa9.47□□□□□ -0.89
SCAPER-220ENST00000568428 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
SCAPER-220ENST00000568428 OSBPL3Q9H4L5 887 aa9.47□□□□□ -0.89
SCAPER-220ENST00000568428 POLMQ9NP87 494 aaPredicted RBP9.47□□□□□ -0.89
SCAPER-220ENST00000568428 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
SCAPER-220ENST00000568428 PTSQ03393 145 aa9.46□□□□□ -0.9
SCAPER-220ENST00000568428 IRF7Q92985 503 aa9.46□□□□□ -0.9
SCAPER-220ENST00000568428 A0A1W2PRU2 124 aa9.45□□□□□ -0.9
SCAPER-220ENST00000568428 FAM181BA6NEQ2 426 aa9.45□□□□□ -0.9
SCAPER-220ENST00000568428 RNF144AP50876 292 aaPredicted RBP9.45□□□□□ -0.9
SCAPER-220ENST00000568428 VSIG8P0DPA2 414 aa9.44□□□□□ -0.9
SCAPER-220ENST00000568428 SLC35F4A4IF30 521 aa9.43□□□□□ -0.9
SCAPER-220ENST00000568428 SOX11P35716 441 aa9.43□□□□□ -0.9
SCAPER-220ENST00000568428 GMPRP36959 345 aa9.43□□□□□ -0.9
SCAPER-220ENST00000568428 SLFNL1Q499Z3 407 aa9.43□□□□□ -0.9
SCAPER-220ENST00000568428 SEMA3FQ13275 785 aa9.42□□□□□ -0.9
SCAPER-220ENST00000568428 CYP2U1Q7Z449 544 aa9.42□□□□□ -0.9
SCAPER-220ENST00000568428 RNF135Q8IUD6 432 aa9.42□□□□□ -0.9
SCAPER-220ENST00000568428 ALG2Q9H553 416 aa9.42□□□□□ -0.9
SCAPER-220ENST00000568428 SENP3-EIF4A1A0A087X0R7 540 aa9.41□□□□□ -0.9
SCAPER-220ENST00000568428 GPC1P35052 558 aa9.41□□□□□ -0.9
SCAPER-220ENST00000568428 CLN3Q13286 438 aa9.41□□□□□ -0.9
SCAPER-220ENST00000568428 CCDC155Q8N6L0 562 aa9.41□□□□□ -0.9
SCAPER-220ENST00000568428 MEN1O00255 615 aa9.4□□□□□ -0.9
SCAPER-220ENST00000568428 RAD21O60216 631 aa9.4□□□□□ -0.9
SCAPER-220ENST00000568428 GNRH1P01148 92 aa9.4□□□□□ -0.9
SCAPER-220ENST00000568428 UBTFP17480 764 aaKnown RBP9.4□□□□□ -0.9
SCAPER-220ENST00000568428 USP4Q13107 963 aa9.4□□□□□ -0.9
SCAPER-220ENST00000568428 LYSMD3Q7Z3D4 306 aa9.4□□□□□ -0.9
SCAPER-220ENST00000568428 DOLKQ9UPQ8 538 aa9.4□□□□□ -0.9
SCAPER-220ENST00000568428 PRICKLE2Q7Z3G6 844 aa9.39□□□□□ -0.91
SCAPER-220ENST00000568428 GRIP2Q9C0E4 1043 aa9.39□□□□□ -0.91
SCAPER-220ENST00000568428 ESF1Q9H501 851 aaKnown RBP9.39□□□□□ -0.91
SCAPER-220ENST00000568428 ARHGEF10LQ9HCE6 1279 aa9.39□□□□□ -0.91
SCAPER-220ENST00000568428 MYCP01106 439 aaPredicted RBP9.38□□□□□ -0.91
SCAPER-220ENST00000568428 NANOS1Q8WY41 292 aaKnown RBP9.38□□□□□ -0.91
SCAPER-220ENST00000568428 HRH3Q9Y5N1 445 aa9.38□□□□□ -0.91
SCAPER-220ENST00000568428 MAP7D1Q3KQU3 841 aa9.37□□□□□ -0.91
SCAPER-220ENST00000568428 PLPP7Q8NBV4 271 aa9.37□□□□□ -0.91
SCAPER-220ENST00000568428 NLRP3Q96P20 1036 aa9.37□□□□□ -0.91
SCAPER-220ENST00000568428 PIK3CDO00329 1044 aa9.36□□□□□ -0.91
SCAPER-220ENST00000568428 IL2RAP01589 272 aa9.36□□□□□ -0.91
SCAPER-220ENST00000568428 LORP23490 312 aaPredicted RBP9.36□□□□□ -0.91
SCAPER-220ENST00000568428 WWC1Q8IX03 1113 aa9.36□□□□□ -0.91
SCAPER-220ENST00000568428 GPR161Q8N6U8 529 aaKnown RBP9.36□□□□□ -0.91
SCAPER-220ENST00000568428 CNKSR1Q969H4 720 aa9.36□□□□□ -0.91
SCAPER-220ENST00000568428 XAGE2Q96GT9 111 aa9.36□□□□□ -0.91
SCAPER-220ENST00000568428 ESYT1Q9BSJ8 1104 aa9.36□□□□□ -0.91
SCAPER-220ENST00000568428 RAB6BQ9NRW1 208 aa9.36□□□□□ -0.91
SCAPER-220ENST00000568428 POM121CA8CG34 1229 aa9.35□□□□□ -0.91
SCAPER-220ENST00000568428 ITGA6P23229 1130 aa9.35□□□□□ -0.91
SCAPER-220ENST00000568428 OXLD1Q5BKU9 147 aa9.35□□□□□ -0.91
SCAPER-220ENST00000568428 ZSCAN1Q8NBB4 408 aa9.35□□□□□ -0.91
SCAPER-220ENST00000568428 RHOQP17081 205 aa9.34□□□□□ -0.91
SCAPER-220ENST00000568428 CENPCQ03188 943 aa9.34□□□□□ -0.91
SCAPER-220ENST00000568428 FNBP4Q8N3X1 1017 aaPredicted RBP9.34□□□□□ -0.91
SCAPER-220ENST00000568428 ADAMTS19Q8TE59 1207 aa9.34□□□□□ -0.91
SCAPER-220ENST00000568428 CLUAP1Q96AJ1 413 aa9.34□□□□□ -0.91
SCAPER-220ENST00000568428 SIRT1Q96EB6 747 aa9.34□□□□□ -0.91
SCAPER-220ENST00000568428 SPATA31C2B4DYI2 1134 aa9.33□□□□□ -0.92
SCAPER-220ENST00000568428 POU4F2Q12837 409 aa9.33□□□□□ -0.92
SCAPER-220ENST00000568428 SLC27A3Q5K4L6 730 aa9.33□□□□□ -0.92
SCAPER-220ENST00000568428 STAU1O95793 577 aaKnown RBP9.32□□□□□ -0.92
SCAPER-220ENST00000568428 ETNK1Q9HBU6 452 aa9.32□□□□□ -0.92
SCAPER-220ENST00000568428 WDR44Q5JSH3 913 aa9.31□□□□□ -0.92
SCAPER-220ENST00000568428 NBPF10Q6P3W6 841 aaKnown RBP9.31□□□□□ -0.92
SCAPER-220ENST00000568428 VWA5B2Q8N398 1253 aa9.31□□□□□ -0.92
SCAPER-220ENST00000568428 NBPF15Q8N660 670 aa9.31□□□□□ -0.92
SCAPER-220ENST00000568428 NFATC2IPQ8NCF5 419 aa9.31□□□□□ -0.92
SCAPER-220ENST00000568428 FHDC1Q9C0D6 1143 aaPredicted RBP9.31□□□□□ -0.92
SCAPER-220ENST00000568428 CUEDC1Q9NWM3 386 aaPredicted RBP9.31□□□□□ -0.92
SCAPER-220ENST00000568428 SCNN1DP51172 638 aa9.3□□□□□ -0.92
SCAPER-220ENST00000568428 KRT76Q01546 638 aa9.3□□□□□ -0.92
SCAPER-220ENST00000568428 ESCO1Q5FWF5 840 aa9.3□□□□□ -0.92
SCAPER-220ENST00000568428 HDGFL1Q5TGJ6 251 aa9.3□□□□□ -0.92
SCAPER-220ENST00000568428 SKIP12755 728 aa9.29□□□□□ -0.92
SCAPER-220ENST00000568428 DYRK1BQ9Y463 629 aa9.29□□□□□ -0.92
SCAPER-220ENST00000568428 PCDHGA11Q9Y5H2 935 aa9.29□□□□□ -0.92
SCAPER-220ENST00000568428 LZTS3O60299 673 aaPredicted RBP9.28□□□□□ -0.92
SCAPER-220ENST00000568428 SV2AQ7L0J3 742 aa9.28□□□□□ -0.92
SCAPER-220ENST00000568428 TAS1R3Q7RTX0 852 aa9.28□□□□□ -0.92
SCAPER-220ENST00000568428 ZSCAN10Q96SZ4 725 aaPredicted RBP9.28□□□□□ -0.92
SCAPER-220ENST00000568428 CDC14CA4D256 554 aa9.27□□□□□ -0.93
SCAPER-220ENST00000568428 WASLO00401 505 aaPredicted RBP9.27□□□□□ -0.93
SCAPER-220ENST00000568428 INHAP05111 366 aa9.27□□□□□ -0.93
SCAPER-220ENST00000568428 PROSER2Q86WR7 435 aaPredicted RBP9.27□□□□□ -0.93
SCAPER-220ENST00000568428 UCN2Q96RP3 112 aa9.27□□□□□ -0.93
SCAPER-220ENST00000568428 COL25A1Q9BXS0 654 aaPredicted RBP9.27□□□□□ -0.93
SCAPER-220ENST00000568428 A6NJR5 290 aa9.26□□□□□ -0.93
SCAPER-220ENST00000568428 GDF10P55107 478 aa9.26□□□□□ -0.93
SCAPER-220ENST00000568428 DBN1Q16643 649 aa9.26□□□□□ -0.93
SCAPER-220ENST00000568428 EML3Q32P44 896 aa9.26□□□□□ -0.93
SCAPER-220ENST00000568428 RNFT1Q5M7Z0 435 aa9.26□□□□□ -0.93
SCAPER-220ENST00000568428 TMEM229AB2RXF0 380 aa9.25□□□□□ -0.93
SCAPER-220ENST00000568428 NCOA4Q13772 614 aa9.25□□□□□ -0.93
SCAPER-220ENST00000568428 PPARGC1BQ86YN6 1023 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms