RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 RAPGEF3O95398 923 aa9.52□□□□□ -0.89
ATXN3-250ENST00000568290 NUCB1Q02818 461 aa9.52□□□□□ -0.89
ATXN3-250ENST00000568290 SSH1Q8WYL5 1049 aa9.52□□□□□ -0.89
ATXN3-250ENST00000568290 OCEL1Q9H607 264 aa9.52□□□□□ -0.89
ATXN3-250ENST00000568290 ZBTB40Q9NUA8 1239 aa9.52□□□□□ -0.89
ATXN3-250ENST00000568290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.52□□□□□ -0.89
ATXN3-250ENST00000568290 METRNQ9UJH8 293 aa9.52□□□□□ -0.89
ATXN3-250ENST00000568290 NOB1Q9ULX3 412 aaKnown RBP9.52□□□□□ -0.89
ATXN3-250ENST00000568290 ALKQ9UM73 1620 aa9.52□□□□□ -0.89
ATXN3-250ENST00000568290 CDK12Q9NYV4 1490 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-250ENST00000568290 ARHGEF40Q8TER5 1519 aa9.51□□□□□ -0.89
ATXN3-250ENST00000568290 HSP90AA1P07900 732 aaKnown RBP9.51□□□□□ -0.89
ATXN3-250ENST00000568290 RBM25P49756 843 aaKnown RBP9.51□□□□□ -0.89
ATXN3-250ENST00000568290 CHD1LQ86WJ1 897 aa9.51□□□□□ -0.89
ATXN3-250ENST00000568290 FAM43AQ8N2R8 423 aa9.51□□□□□ -0.89
ATXN3-250ENST00000568290 ANP32BQ92688 251 aaKnown RBP9.51□□□□□ -0.89
ATXN3-250ENST00000568290 CABP1Q9NZU7 370 aa9.51□□□□□ -0.89
ATXN3-250ENST00000568290 SOS1Q07889 1333 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-250ENST00000568290 PIK3R4Q99570 1358 aa9.5□□□□□ -0.89
ATXN3-250ENST00000568290 RIMS2Q9UQ26 1411 aa9.5□□□□□ -0.89
ATXN3-250ENST00000568290 KIF20BQ96Q89 1820 aa9.5□□□□□ -0.89
ATXN3-250ENST00000568290 GOLGA6L3A6NEY3 463 aa9.5□□□□□ -0.89
ATXN3-250ENST00000568290 WASLO00401 505 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-250ENST00000568290 HMMRO75330 724 aa9.5□□□□□ -0.89
ATXN3-250ENST00000568290 PTCH1Q13635 1447 aa9.49□□□□□ -0.89
ATXN3-250ENST00000568290 FRAT2O75474 233 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-250ENST00000568290 RLBP1P12271 317 aa9.49□□□□□ -0.89
ATXN3-250ENST00000568290 PRKAR2BP31323 418 aa9.49□□□□□ -0.89
ATXN3-250ENST00000568290 SAFB2Q14151 953 aaKnown RBP eCLIP9.49□□□□□ -0.89
ATXN3-250ENST00000568290 DPY19L2Q6NUT2 758 aa9.49□□□□□ -0.89
ATXN3-250ENST00000568290 RPAP2Q8IXW5 612 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-250ENST00000568290 BCL2L13Q9BXK5 485 aa9.49□□□□□ -0.89
ATXN3-250ENST00000568290 RSPH6AQ9H0K4 717 aa9.49□□□□□ -0.89
ATXN3-250ENST00000568290 USP19O94966 1318 aa9.49□□□□□ -0.89
ATXN3-250ENST00000568290 PTPRCP08575 1304 aa9.49□□□□□ -0.89
ATXN3-250ENST00000568290 SPATA31D1Q6ZQQ2 1576 aa9.49□□□□□ -0.89
ATXN3-250ENST00000568290 CPSF1Q10570 1443 aaKnown RBP9.48□□□□□ -0.89
ATXN3-250ENST00000568290 HSP90AB1P08238 724 aaKnown RBP9.48□□□□□ -0.89
ATXN3-250ENST00000568290 SLC4A3P48751 1232 aa9.48□□□□□ -0.89
ATXN3-250ENST00000568290 MFAP1P55081 439 aaKnown RBP9.48□□□□□ -0.89
ATXN3-250ENST00000568290 TMEM57Q8N5G2 664 aa9.48□□□□□ -0.89
ATXN3-250ENST00000568290 TSR2Q969E8 191 aaKnown RBP9.48□□□□□ -0.89
ATXN3-250ENST00000568290 TBC1D2Q9BYX2 928 aa9.48□□□□□ -0.89
ATXN3-250ENST00000568290 TTC21BQ7Z4L5 1316 aa9.48□□□□□ -0.89
ATXN3-250ENST00000568290 SIGLEC1Q9BZZ2 1709 aa9.48□□□□□ -0.89
ATXN3-250ENST00000568290 NLRP1Q9C000 1473 aa9.47□□□□□ -0.89
ATXN3-250ENST00000568290 CDC45O75419 566 aa9.47□□□□□ -0.89
ATXN3-250ENST00000568290 MCM4P33991 863 aa9.47□□□□□ -0.89
ATXN3-250ENST00000568290 MRE11P49959 708 aa9.47□□□□□ -0.89
ATXN3-250ENST00000568290 TWISTNBQ3B726 338 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-250ENST00000568290 TMEM121BQ9BXQ6 578 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-250ENST00000568290 SLKQ9H2G2 1235 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-250ENST00000568290 POLKQ9UBT6 870 aa9.47□□□□□ -0.89
ATXN3-250ENST00000568290 KIAA0232Q92628 1395 aa9.47□□□□□ -0.89
ATXN3-250ENST00000568290 TECPR2O15040 1411 aa9.47□□□□□ -0.89
ATXN3-250ENST00000568290 A2ML1A8K2U0 1454 aa9.47□□□□□ -0.89
ATXN3-250ENST00000568290 CD163L1Q9NR16 1453 aa9.47□□□□□ -0.89
ATXN3-250ENST00000568290 NUCB2P80303 420 aa9.46□□□□□ -0.9
ATXN3-250ENST00000568290 ANTXR1Q9H6X2 564 aa9.46□□□□□ -0.9
ATXN3-250ENST00000568290 CWC22Q9HCG8 908 aaKnown RBP9.46□□□□□ -0.9
ATXN3-250ENST00000568290 CFAP65Q6ZU64 1925 aaKnown RBP9.46□□□□□ -0.9
ATXN3-250ENST00000568290 YEATS2Q9ULM3 1422 aa9.46□□□□□ -0.9
ATXN3-250ENST00000568290 ZBTB7BO15156 539 aaPredicted RBP9.45□□□□□ -0.9
ATXN3-250ENST00000568290 HTATSF1O43719 755 aaKnown RBP9.45□□□□□ -0.9
ATXN3-250ENST00000568290 VAMP4O75379 141 aa9.45□□□□□ -0.9
ATXN3-250ENST00000568290 REC8O95072 547 aa9.45□□□□□ -0.9
ATXN3-250ENST00000568290 ZNF853P0CG23 659 aa9.45□□□□□ -0.9
ATXN3-250ENST00000568290 PLCG2P16885 1265 aa9.45□□□□□ -0.9
ATXN3-250ENST00000568290 RABEP1Q15276 862 aa9.45□□□□□ -0.9
ATXN3-250ENST00000568290 ANKRD45Q5TZF3 282 aa9.45□□□□□ -0.9
ATXN3-250ENST00000568290 NUTM2DQ5VT03 806 aaPredicted RBP9.45□□□□□ -0.9
ATXN3-250ENST00000568290 INTS3Q68E01 1043 aaKnown RBP9.45□□□□□ -0.9
ATXN3-250ENST00000568290 MRPL50Q8N5N7 158 aaKnown RBP9.45□□□□□ -0.9
ATXN3-250ENST00000568290 ABCC4O15439 1325 aa9.45□□□□□ -0.9
ATXN3-250ENST00000568290 TTC21AQ8NDW8 1320 aa9.45□□□□□ -0.9
ATXN3-250ENST00000568290 POTEB2H3BUK9 544 aa9.44□□□□□ -0.9
ATXN3-250ENST00000568290 EPB41L2O43491 1005 aaKnown RBP9.44□□□□□ -0.9
ATXN3-250ENST00000568290 ST18O60284 1047 aa9.44□□□□□ -0.9
ATXN3-250ENST00000568290 MCCP23508 829 aa9.44□□□□□ -0.9
ATXN3-250ENST00000568290 IL13P35225 146 aa9.44□□□□□ -0.9
ATXN3-250ENST00000568290 MCM2P49736 904 aa9.44□□□□□ -0.9
ATXN3-250ENST00000568290 FAM69CQ0P6D2 419 aa9.44□□□□□ -0.9
ATXN3-250ENST00000568290 SKAP1Q86WV1 359 aa9.44□□□□□ -0.9
ATXN3-250ENST00000568290 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.44□□□□□ -0.9
ATXN3-250ENST00000568290 RTF1Q92541 710 aaKnown RBP9.44□□□□□ -0.9
ATXN3-250ENST00000568290 NUDT16Q96DE0 195 aaKnown RBP9.44□□□□□ -0.9
ATXN3-250ENST00000568290 BABAM1Q9NWV8 329 aa9.44□□□□□ -0.9
ATXN3-250ENST00000568290 HDAC5Q9UQL6 1122 aa9.44□□□□□ -0.9
ATXN3-250ENST00000568290 LRRC7Q96NW7 1537 aa9.44□□□□□ -0.9
ATXN3-250ENST00000568290 KNDC1Q76NI1 1749 aa9.44□□□□□ -0.9
ATXN3-250ENST00000568290 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
ATXN3-250ENST00000568290 EID1Q9Y6B2 187 aa9.43□□□□□ -0.9
ATXN3-250ENST00000568290 K7ELQ4 463 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-250ENST00000568290 TRAK2O60296 914 aa9.42□□□□□ -0.9
ATXN3-250ENST00000568290 SEC24BO95487 1268 aa9.42□□□□□ -0.9
ATXN3-250ENST00000568290 CCT4P50991 539 aaKnown RBP9.42□□□□□ -0.9
ATXN3-250ENST00000568290 GAS2L2Q8NHY3 880 aa9.42□□□□□ -0.9
ATXN3-250ENST00000568290 CPS1P31327 1500 aa9.41□□□□□ -0.9
ATXN3-250ENST00000568290 PLEKHG3A1L390 1219 aa9.41□□□□□ -0.9
ATXN3-250ENST00000568290 CADPS2Q86UW7 1296 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms