RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 APBA3O96018 575 aa17.59■□□□□ 0.41
CNOT1-213ENST00000568158 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
CNOT1-213ENST00000568158 ACSBG1Q96GR2 724 aa17.59■□□□□ 0.41
CNOT1-213ENST00000568158 KAT6BQ8WYB5 2073 aa17.59■□□□□ 0.41
CNOT1-213ENST00000568158 OVOS2A0A0G2JMS6 1433 aa17.58■□□□□ 0.41
CNOT1-213ENST00000568158 TNS2Q63HR2 1409 aa17.58■□□□□ 0.41
CNOT1-213ENST00000568158 EN1Q05925 392 aaPredicted RBP17.58■□□□□ 0.4
CNOT1-213ENST00000568158 RNF39Q9H2S5 420 aa17.58■□□□□ 0.4
CNOT1-213ENST00000568158 IGSF1Q8N6C5 1336 aa17.57■□□□□ 0.4
CNOT1-213ENST00000568158 KCNQ2O43526 872 aa17.57■□□□□ 0.4
CNOT1-213ENST00000568158 DIAPH1O60610 1272 aaKnown RBP17.56■□□□□ 0.4
CNOT1-213ENST00000568158 BAG6P46379 1132 aa17.56■□□□□ 0.4
CNOT1-213ENST00000568158 SULT6B1Q6IMI4 303 aa17.56■□□□□ 0.4
CNOT1-213ENST00000568158 AEBP1Q8IUX7 1158 aa17.56■□□□□ 0.4
CNOT1-213ENST00000568158 NCAPD2Q15021 1401 aa17.55■□□□□ 0.4
CNOT1-213ENST00000568158 BCL11BQ9C0K0 894 aaPredicted RBP17.55■□□□□ 0.4
CNOT1-213ENST00000568158 SBF2Q86WG5 1849 aa17.55■□□□□ 0.4
CNOT1-213ENST00000568158 EZH2Q15910 746 aaKnown RBP17.54■□□□□ 0.4
CNOT1-213ENST00000568158 CYP27B1O15528 508 aa17.53■□□□□ 0.4
CNOT1-213ENST00000568158 HMOX1P09601 288 aa17.53■□□□□ 0.4
CNOT1-213ENST00000568158 BCL9O00512 1426 aa17.53■□□□□ 0.4
CNOT1-213ENST00000568158 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.4
CNOT1-213ENST00000568158 CAMKK2Q96RR4 588 aa17.52■□□□□ 0.4
CNOT1-213ENST00000568158 SPG7Q9UQ90 795 aa17.52■□□□□ 0.4
CNOT1-213ENST00000568158 U2SURPO15042 1029 aaKnown RBP17.51■□□□□ 0.39
CNOT1-213ENST00000568158 PRIM1P49642 420 aaKnown RBP17.51■□□□□ 0.39
CNOT1-213ENST00000568158 CFAP53Q96M91 514 aa17.51■□□□□ 0.39
CNOT1-213ENST00000568158 SHANK3Q9BYB0 1731 aa17.51■□□□□ 0.39
CNOT1-213ENST00000568158 TNS1Q9HBL0 1735 aaKnown RBP17.51■□□□□ 0.39
CNOT1-213ENST00000568158 PARD3Q8TEW0 1356 aa17.51■□□□□ 0.39
CNOT1-213ENST00000568158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.5■□□□□ 0.392e-13■■■■□ 20.6
CNOT1-213ENST00000568158 PCDH11XQ9BZA7 1347 aa17.49■□□□□ 0.39
CNOT1-213ENST00000568158 PCDH11YQ9BZA8 1340 aa17.49■□□□□ 0.39
CNOT1-213ENST00000568158 RALBP1Q15311 655 aa17.49■□□□□ 0.39
CNOT1-213ENST00000568158 PLEKHO1Q53GL0 409 aaPredicted RBP17.49■□□□□ 0.39
CNOT1-213ENST00000568158 SYTL4Q96C24 671 aaPredicted RBP17.49■□□□□ 0.39
CNOT1-213ENST00000568158 COL3A1P02461 1466 aaPredicted RBP17.48■□□□□ 0.39
CNOT1-213ENST00000568158 PLSCR1O15162 318 aa17.47■□□□□ 0.39
CNOT1-213ENST00000568158 PHKG2P15735 406 aa17.47■□□□□ 0.39
CNOT1-213ENST00000568158 IFNL2Q8IZJ0 200 aa17.47■□□□□ 0.39
CNOT1-213ENST00000568158 KDRP35968 1356 aa17.46■□□□□ 0.39
CNOT1-213ENST00000568158 NKX1-1Q15270 411 aaPredicted RBP17.46■□□□□ 0.39
CNOT1-213ENST00000568158 PROM2Q8N271 834 aa17.46■□□□□ 0.39
CNOT1-213ENST00000568158 PKD1L3Q7Z443 1732 aa17.45■□□□□ 0.38
CNOT1-213ENST00000568158 AMOTQ4VCS5 1084 aa17.45■□□□□ 0.38
CNOT1-213ENST00000568158 ZNF530Q6P9A1 599 aaPredicted RBP17.45■□□□□ 0.38
CNOT1-213ENST00000568158 NUDCQ9Y266 331 aa17.45■□□□□ 0.38
CNOT1-213ENST00000568158 DCAF8L1A6NGE4 600 aa17.43■□□□□ 0.38
CNOT1-213ENST00000568158 U2AF1L5P0DN76 240 aaPredicted RBP17.43■□□□□ 0.38
CNOT1-213ENST00000568158 U2AF1Q01081 240 aaKnown RBP eCLIP17.43■□□□□ 0.38
CNOT1-213ENST00000568158 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
CNOT1-213ENST00000568158 PRKRIP1Q9H875 184 aaPredicted RBP17.43■□□□□ 0.38
CNOT1-213ENST00000568158 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
CNOT1-213ENST00000568158 TXNRD1Q16881 649 aa17.42■□□□□ 0.38
CNOT1-213ENST00000568158 MTHFSDQ2M296 383 aaKnown RBP17.42■□□□□ 0.38
CNOT1-213ENST00000568158 DOT1LQ8TEK3 1739 aa17.41■□□□□ 0.38
CNOT1-213ENST00000568158 BTAF1O14981 1849 aa17.4■□□□□ 0.38
CNOT1-213ENST00000568158 C1orf141Q5JVX7 400 aa17.4■□□□□ 0.38
CNOT1-213ENST00000568158 PIGBQ92521 554 aa17.4■□□□□ 0.38
CNOT1-213ENST00000568158 PHACTR3Q96KR7 559 aa17.4■□□□□ 0.38
CNOT1-213ENST00000568158 RSPH6AQ9H0K4 717 aa17.4■□□□□ 0.38
CNOT1-213ENST00000568158 MYBBP1AQ9BQG0 1328 aaKnown RBP17.4■□□□□ 0.38
CNOT1-213ENST00000568158 PSDA5PKW4 1024 aaPredicted RBP17.39■□□□□ 0.37
CNOT1-213ENST00000568158 PRKAR2BP31323 418 aa17.39■□□□□ 0.37
CNOT1-213ENST00000568158 PLEKHG2Q9H7P9 1386 aa17.39■□□□□ 0.37
CNOT1-213ENST00000568158 HSP90AB1P08238 724 aaKnown RBP17.38■□□□□ 0.37
CNOT1-213ENST00000568158 KCNQ4P56696 695 aa17.38■□□□□ 0.37
CNOT1-213ENST00000568158 AKAP4Q5JQC9 854 aa17.38■□□□□ 0.37
CNOT1-213ENST00000568158 DCAF5Q96JK2 942 aa17.38■□□□□ 0.37
CNOT1-213ENST00000568158 LGR6Q9HBX8 967 aa17.38■□□□□ 0.37
CNOT1-213ENST00000568158 ITGB4P16144 1822 aa17.37■□□□□ 0.37
CNOT1-213ENST00000568158 FCHSD2O94868 740 aa17.37■□□□□ 0.37
CNOT1-213ENST00000568158 R3HDM1Q15032 1099 aaKnown RBP17.37■□□□□ 0.37
CNOT1-213ENST00000568158 NBPF14Q5TI25 921 aa17.37■□□□□ 0.37
CNOT1-213ENST00000568158 LRRC4BQ9NT99 713 aa17.37■□□□□ 0.37
CNOT1-213ENST00000568158 TOGARAM1Q9Y4F4 1720 aa17.36■□□□□ 0.37
CNOT1-213ENST00000568158 ERVV-2B6SEH9 535 aa17.36■□□□□ 0.37
CNOT1-213ENST00000568158 TMOD3Q9NYL9 352 aa17.36■□□□□ 0.37
CNOT1-213ENST00000568158 CABP4P57796 275 aa17.35■□□□□ 0.37
CNOT1-213ENST00000568158 ASAP1Q9ULH1 1129 aa17.35■□□□□ 0.37
CNOT1-213ENST00000568158 RREB1Q92766 1687 aa17.35■□□□□ 0.37
CNOT1-213ENST00000568158 KDM6AO15550 1401 aaPredicted RBP17.34■□□□□ 0.37
CNOT1-213ENST00000568158 RNMTO43148 476 aaKnown RBP17.34■□□□□ 0.37
CNOT1-213ENST00000568158 NFATC2IPQ8NCF5 419 aa17.34■□□□□ 0.37
CNOT1-213ENST00000568158 NUP188Q5SRE5 1749 aa17.33■□□□□ 0.37
CNOT1-213ENST00000568158 ANO8Q9HCE9 1232 aaPredicted RBP17.33■□□□□ 0.36
CNOT1-213ENST00000568158 ATG3Q9NT62 314 aa17.33■□□□□ 0.36
CNOT1-213ENST00000568158 HOXD11P31277 338 aaPredicted RBP17.32■□□□□ 0.36
CNOT1-213ENST00000568158 GAS2L2Q8NHY3 880 aa17.32■□□□□ 0.36
CNOT1-213ENST00000568158 RGPD3A6NKT7 1758 aaPredicted RBP17.32■□□□□ 0.36
CNOT1-213ENST00000568158 RGPD4Q7Z3J3 1758 aa17.32■□□□□ 0.36
CNOT1-213ENST00000568158 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
CNOT1-213ENST00000568158 ANP32CO43423 234 aa17.31■□□□□ 0.36
CNOT1-213ENST00000568158 CCDC184Q52MB2 194 aa17.31■□□□□ 0.36
CNOT1-213ENST00000568158 SLC27A3Q5K4L6 730 aa17.31■□□□□ 0.36
CNOT1-213ENST00000568158 IL17REQ8NFR9 667 aa17.31■□□□□ 0.36
CNOT1-213ENST00000568158 SMARCC1Q92922 1105 aaPredicted RBP17.31■□□□□ 0.36
CNOT1-213ENST00000568158 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
CNOT1-213ENST00000568158 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
CNOT1-213ENST00000568158 PALLDQ8WX93 1383 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms