RNA–Protein interactions for RNA: ENST00000567681.1

NEIL1-216, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 605 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-216ENST00000567681 AMPHP49418 695 aa23.72■■□□□ 1.39
NEIL1-216ENST00000567681 RRS1Q15050 365 aaKnown RBP23.72■■□□□ 1.39
NEIL1-216ENST00000567681 GOLGB1Q14789 3259 aaKnown RBP23.71■■□□□ 1.39
NEIL1-216ENST00000567681 SLC27A3Q5K4L6 730 aa23.71■■□□□ 1.39
NEIL1-216ENST00000567681 GGNBP2Q9H3C7 697 aa23.71■■□□□ 1.39
NEIL1-216ENST00000567681 MAP3K5Q99683 1374 aa23.7■■□□□ 1.38
NEIL1-216ENST00000567681 DCAF8L1A6NGE4 600 aa23.7■■□□□ 1.38
NEIL1-216ENST00000567681 PRIM1P49642 420 aaKnown RBP23.7■■□□□ 1.38
NEIL1-216ENST00000567681 NBPF6Q5VWK0 638 aa23.7■■□□□ 1.38
NEIL1-216ENST00000567681 NBPF4Q96M43 638 aa23.7■■□□□ 1.38
NEIL1-216ENST00000567681 CHD4Q14839 1912 aa23.7■■□□□ 1.38
NEIL1-216ENST00000567681 ZCRB1Q8TBF4 217 aaKnown RBP23.69■■□□□ 1.38
NEIL1-216ENST00000567681 ANKRD26Q9UPS8 1709 aa23.68■■□□□ 1.38
NEIL1-216ENST00000567681 PNPLA7Q6ZV29 1317 aa23.68■■□□□ 1.38
NEIL1-216ENST00000567681 KCNQ4P56696 695 aa23.68■■□□□ 1.38
NEIL1-216ENST00000567681 TMF1P82094 1093 aa23.68■■□□□ 1.38
NEIL1-216ENST00000567681 ARXQ96QS3 562 aa23.68■■□□□ 1.38
NEIL1-216ENST00000567681 USHBP1Q8N6Y0 703 aa23.66■■□□□ 1.38
NEIL1-216ENST00000567681 TOGARAM1Q9Y4F4 1720 aa23.66■■□□□ 1.38
NEIL1-216ENST00000567681 INSRP06213 1382 aa23.65■■□□□ 1.38
NEIL1-216ENST00000567681 SYTL4Q96C24 671 aaPredicted RBP23.65■■□□□ 1.38
NEIL1-216ENST00000567681 PKD1L3Q7Z443 1732 aa23.64■■□□□ 1.38
NEIL1-216ENST00000567681 C5P01031 1676 aa23.64■■□□□ 1.38
NEIL1-216ENST00000567681 HSP90AB2PQ58FF8 381 aa23.64■■□□□ 1.37
NEIL1-216ENST00000567681 CARD14Q9BXL6 1004 aa23.64■■□□□ 1.37
NEIL1-216ENST00000567681 TAF1LQ8IZX4 1826 aa23.63■■□□□ 1.37
NEIL1-216ENST00000567681 TRIM26Q12899 539 aaPredicted RBP23.63■■□□□ 1.37
NEIL1-216ENST00000567681 ITGB4P16144 1822 aa23.63■■□□□ 1.37
NEIL1-216ENST00000567681 CGNL1Q0VF96 1302 aa23.62■■□□□ 1.37
NEIL1-216ENST00000567681 SMG6Q86US8 1419 aaKnown RBP23.62■■□□□ 1.37
NEIL1-216ENST00000567681 SLC16A10Q8TF71 515 aa23.62■■□□□ 1.37
NEIL1-216ENST00000567681 FLT4P35916 1363 aa23.62■■□□□ 1.37
NEIL1-216ENST00000567681 KIF24Q5T7B8 1368 aa23.62■■□□□ 1.37
NEIL1-216ENST00000567681 NCAPD2Q15021 1401 aa23.6■■□□□ 1.37
NEIL1-216ENST00000567681 NSD3Q9BZ95 1437 aa23.59■■□□□ 1.37
NEIL1-216ENST00000567681 ZNF784Q8NCA9 323 aaPredicted RBP23.58■■□□□ 1.37
NEIL1-216ENST00000567681 TFCP2L1Q9NZI6 479 aa23.58■■□□□ 1.37
NEIL1-216ENST00000567681 MAP2P11137 1827 aaKnown RBP23.58■■□□□ 1.37
NEIL1-216ENST00000567681 RAPGEF4Q8WZA2 1011 aa23.57■■□□□ 1.36
NEIL1-216ENST00000567681 CCNL1Q9UK58 526 aaPredicted RBP23.57■■□□□ 1.36
NEIL1-216ENST00000567681 CDCA8Q53HL2 280 aa23.56■■□□□ 1.36
NEIL1-216ENST00000567681 EMILIN1Q9Y6C2 1016 aa23.56■■□□□ 1.36
NEIL1-216ENST00000567681 CYP27B1O15528 508 aa23.55■■□□□ 1.36
NEIL1-216ENST00000567681 TATP17735 454 aaPredicted RBP23.55■■□□□ 1.36
NEIL1-216ENST00000567681 PCDH11XQ9BZA7 1347 aa23.55■■□□□ 1.36
NEIL1-216ENST00000567681 PCDH11YQ9BZA8 1340 aa23.55■■□□□ 1.36
NEIL1-216ENST00000567681 COL23A1Q86Y22 540 aaPredicted RBP23.53■■□□□ 1.36
NEIL1-216ENST00000567681 C4BP0C0L5 1744 aa23.51■■□□□ 1.35
NEIL1-216ENST00000567681 POLD1P28340 1107 aa23.51■■□□□ 1.35
NEIL1-216ENST00000567681 NLGN2Q8NFZ4 835 aa23.51■■□□□ 1.35
NEIL1-216ENST00000567681 UBR3Q6ZT12 1888 aa23.51■■□□□ 1.35
NEIL1-216ENST00000567681 PALLDQ8WX93 1383 aa23.5■■□□□ 1.35
NEIL1-216ENST00000567681 TIMELESSQ9UNS1 1208 aa23.48■■□□□ 1.35
NEIL1-216ENST00000567681 WASHC2AQ641Q2 1341 aa23.47■■□□□ 1.35
NEIL1-216ENST00000567681 NKX1-1Q15270 411 aaPredicted RBP23.46■■□□□ 1.35
NEIL1-216ENST00000567681 GPR162Q16538 588 aa23.46■■□□□ 1.35
NEIL1-216ENST00000567681 MPRIPQ6WCQ1 1025 aa23.46■■□□□ 1.35
NEIL1-216ENST00000567681 KLHL34Q8N239 644 aa23.46■■□□□ 1.35
NEIL1-216ENST00000567681 AMIGO3Q86WK7 504 aa23.45■■□□□ 1.34
NEIL1-216ENST00000567681 MSL1Q68DK7 614 aa23.43■■□□□ 1.34
NEIL1-216ENST00000567681 PIGBQ92521 554 aa23.43■■□□□ 1.34
NEIL1-216ENST00000567681 EYA1Q99502 592 aa23.43■■□□□ 1.34
NEIL1-216ENST00000567681 POLKQ9UBT6 870 aa23.43■■□□□ 1.34
NEIL1-216ENST00000567681 PPM1GO15355 546 aaPredicted RBP23.41■■□□□ 1.34
NEIL1-216ENST00000567681 MSH5O43196 834 aa23.41■■□□□ 1.34
NEIL1-216ENST00000567681 YBX3P16989 372 aaKnown RBP eCLIP23.41■■□□□ 1.34
NEIL1-216ENST00000567681 CLSPNQ9HAW4 1339 aa23.4■■□□□ 1.34
NEIL1-216ENST00000567681 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.39■■□□□ 1.33
NEIL1-216ENST00000567681 SMARCC1Q92922 1105 aaPredicted RBP23.38■■□□□ 1.33
NEIL1-216ENST00000567681 SPG7Q9UQ90 795 aa23.38■■□□□ 1.33
NEIL1-216ENST00000567681 SMIM5Q71RC9 77 aa23.37■■□□□ 1.33
NEIL1-216ENST00000567681 PELP1Q8IZL8 1130 aaKnown RBP23.37■■□□□ 1.33
NEIL1-216ENST00000567681 FLAD1Q8NFF5 587 aa23.37■■□□□ 1.33
NEIL1-216ENST00000567681 PHKG2P15735 406 aa23.36■■□□□ 1.33
NEIL1-216ENST00000567681 EIF4A2Q14240 407 aaKnown RBP23.36■■□□□ 1.33
NEIL1-216ENST00000567681 ZNF831Q5JPB2 1677 aa23.35■■□□□ 1.33
NEIL1-216ENST00000567681 LINC00116Q8NCU8 138 aa23.34■■□□□ 1.33
NEIL1-216ENST00000567681 PLEKHG2Q9H7P9 1386 aa23.34■■□□□ 1.33
NEIL1-216ENST00000567681 LOC102724428A0A0B4J2F2 783 aa23.33■■□□□ 1.33
NEIL1-216ENST00000567681 SIK1P57059 783 aa23.33■■□□□ 1.33
NEIL1-216ENST00000567681 ITPK1Q13572 414 aa23.33■■□□□ 1.33
NEIL1-216ENST00000567681 ASAP1Q9ULH1 1129 aa23.33■■□□□ 1.33
NEIL1-216ENST00000567681 CD2APQ9Y5K6 639 aa23.33■■□□□ 1.33
NEIL1-216ENST00000567681 COL5A3P25940 1745 aaPredicted RBP23.33■■□□□ 1.32
NEIL1-216ENST00000567681 IGSF1Q8N6C5 1336 aa23.33■■□□□ 1.32
NEIL1-216ENST00000567681 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.32■■□□□ 1.32
NEIL1-216ENST00000567681 HMGB2P26583 209 aaKnown RBP23.32■■□□□ 1.32
NEIL1-216ENST00000567681 TNNT2P45379 298 aaPredicted RBP23.32■■□□□ 1.32
NEIL1-216ENST00000567681 C1QTNF8P60827 252 aa23.32■■□□□ 1.32
NEIL1-216ENST00000567681 AK7Q96M32 723 aa23.32■■□□□ 1.32
NEIL1-216ENST00000567681 KDRP35968 1356 aa23.31■■□□□ 1.32
NEIL1-216ENST00000567681 IFNL2Q8IZJ0 200 aa23.31■■□□□ 1.32
NEIL1-216ENST00000567681 TMOD3Q9NYL9 352 aa23.31■■□□□ 1.32
NEIL1-216ENST00000567681 GRIN3BO60391 1043 aa23.3■■□□□ 1.32
NEIL1-216ENST00000567681 PHF14O94880 888 aa23.3■■□□□ 1.32
NEIL1-216ENST00000567681 PCGF6Q9BYE7 350 aa23.3■■□□□ 1.32
NEIL1-216ENST00000567681 KIAA1551Q9HCM1 1747 aa23.3■■□□□ 1.32
NEIL1-216ENST00000567681 KIF13BQ9NQT8 1826 aa23.29■■□□□ 1.32
NEIL1-216ENST00000567681 HSPA5P11021 654 aaKnown RBP23.29■■□□□ 1.32
NEIL1-216ENST00000567681 SSFA2P28290 1259 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms