RNA–Protein interactions for RNA: ENST00000567535.5

SCAMP5-213, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 593 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-213ENST00000567535 TIMELESSQ9UNS1 1208 aa27.56■■■□□ 2
SCAMP5-213ENST00000567535 SLC27A3Q5K4L6 730 aa27.55■■■□□ 2
SCAMP5-213ENST00000567535 SGIP1Q9BQI5 828 aa27.55■■■□□ 2
SCAMP5-213ENST00000567535 QSER1Q2KHR3 1735 aa27.55■■■□□ 2
SCAMP5-213ENST00000567535 NSD2O96028 1365 aa27.54■■■□□ 2
SCAMP5-213ENST00000567535 INSRP06213 1382 aa27.54■■■□□ 2
SCAMP5-213ENST00000567535 YY1P25490 414 aa27.54■■■□□ 2
SCAMP5-213ENST00000567535 KIF24Q5T7B8 1368 aa27.54■■■□□ 2
SCAMP5-213ENST00000567535 LY75O60449 1722 aa27.53■■■□□ 2
SCAMP5-213ENST00000567535 FLT4P35916 1363 aa27.53■■■□□ 2
SCAMP5-213ENST00000567535 CGNL1Q0VF96 1302 aa27.53■■■□□ 2
SCAMP5-213ENST00000567535 PRIM1P49642 420 aaKnown RBP27.53■■■□□ 2
SCAMP5-213ENST00000567535 SYTL4Q96C24 671 aaPredicted RBP27.53■■■□□ 2
SCAMP5-213ENST00000567535 NSD3Q9BZ95 1437 aa27.51■■□□□ 1.99
SCAMP5-213ENST00000567535 USHBP1Q8N6Y0 703 aa27.51■■□□□ 1.99
SCAMP5-213ENST00000567535 AKT1S1Q96B36 256 aa27.51■■□□□ 1.99
SCAMP5-213ENST00000567535 CLSPNQ9HAW4 1339 aa27.5■■□□□ 1.99
SCAMP5-213ENST00000567535 HSP90AB2PQ58FF8 381 aa27.5■■□□□ 1.99
SCAMP5-213ENST00000567535 CARD14Q9BXL6 1004 aa27.5■■□□□ 1.99
SCAMP5-213ENST00000567535 FHDC1Q9C0D6 1143 aaPredicted RBP27.5■■□□□ 1.99
SCAMP5-213ENST00000567535 RAPGEF4Q8WZA2 1011 aa27.49■■□□□ 1.99
SCAMP5-213ENST00000567535 SYT17Q9BSW7 474 aa27.48■■□□□ 1.99
SCAMP5-213ENST00000567535 TUBGCP6Q96RT7 1819 aa27.48■■□□□ 1.99
SCAMP5-213ENST00000567535 ANKRD26Q9UPS8 1709 aa27.47■■□□□ 1.99
SCAMP5-213ENST00000567535 COL24A1Q17RW2 1714 aa27.45■■□□□ 1.99
SCAMP5-213ENST00000567535 TATP17735 454 aaPredicted RBP27.45■■□□□ 1.98
SCAMP5-213ENST00000567535 ARXQ96QS3 562 aa27.45■■□□□ 1.98
SCAMP5-213ENST00000567535 MAP3K5Q99683 1374 aa27.45■■□□□ 1.98
SCAMP5-213ENST00000567535 PNPLA7Q6ZV29 1317 aa27.44■■□□□ 1.98
SCAMP5-213ENST00000567535 KCNQ4P56696 695 aa27.44■■□□□ 1.98
SCAMP5-213ENST00000567535 PCDH11XQ9BZA7 1347 aa27.43■■□□□ 1.98
SCAMP5-213ENST00000567535 PCDH11YQ9BZA8 1340 aa27.43■■□□□ 1.98
SCAMP5-213ENST00000567535 SLC16A10Q8TF71 515 aa27.43■■□□□ 1.98
SCAMP5-213ENST00000567535 EMILIN1Q9Y6C2 1016 aa27.43■■□□□ 1.98
SCAMP5-213ENST00000567535 PKD1L3Q7Z443 1732 aa27.41■■□□□ 1.98
SCAMP5-213ENST00000567535 TFCP2L1Q9NZI6 479 aa27.41■■□□□ 1.98
SCAMP5-213ENST00000567535 CCNL1Q9UK58 526 aaPredicted RBP27.41■■□□□ 1.98
SCAMP5-213ENST00000567535 NCAPD2Q15021 1401 aa27.41■■□□□ 1.98
SCAMP5-213ENST00000567535 UTRNP46939 3433 aa27.39■■□□□ 1.98
SCAMP5-213ENST00000567535 PCGF6Q9BYE7 350 aa27.38■■□□□ 1.97
SCAMP5-213ENST00000567535 TOGARAM1Q9Y4F4 1720 aa27.37■■□□□ 1.97
SCAMP5-213ENST00000567535 C5P01031 1676 aa27.36■■□□□ 1.97
SCAMP5-213ENST00000567535 CYP27B1O15528 508 aa27.36■■□□□ 1.97
SCAMP5-213ENST00000567535 POLD1P28340 1107 aa27.35■■□□□ 1.97
SCAMP5-213ENST00000567535 MAP2P11137 1827 aaKnown RBP27.34■■□□□ 1.97
SCAMP5-213ENST00000567535 PPM1GO15355 546 aaPredicted RBP27.34■■□□□ 1.97
SCAMP5-213ENST00000567535 WASHC2AQ641Q2 1341 aa27.34■■□□□ 1.97
SCAMP5-213ENST00000567535 ITGB4P16144 1822 aa27.32■■□□□ 1.96
SCAMP5-213ENST00000567535 PALLDQ8WX93 1383 aa27.32■■□□□ 1.96
SCAMP5-213ENST00000567535 TAF1LQ8IZX4 1826 aa27.31■■□□□ 1.96
SCAMP5-213ENST00000567535 MPRIPQ6WCQ1 1025 aa27.3■■□□□ 1.96
SCAMP5-213ENST00000567535 POLKQ9UBT6 870 aa27.29■■□□□ 1.96
SCAMP5-213ENST00000567535 CHD4Q14839 1912 aa27.29■■□□□ 1.96
SCAMP5-213ENST00000567535 POLR3GLQ9BT43 218 aa27.28■■□□□ 1.96
SCAMP5-213ENST00000567535 HMGB2P26583 209 aaKnown RBP27.27■■□□□ 1.96
SCAMP5-213ENST00000567535 NKX1-1Q15270 411 aaPredicted RBP27.27■■□□□ 1.96
SCAMP5-213ENST00000567535 COL23A1Q86Y22 540 aaPredicted RBP27.27■■□□□ 1.96
SCAMP5-213ENST00000567535 EYA1Q99502 592 aa27.27■■□□□ 1.96
SCAMP5-213ENST00000567535 SPG7Q9UQ90 795 aa27.27■■□□□ 1.96
SCAMP5-213ENST00000567535 EIF4G2P78344 907 aaKnown RBP eCLIP27.26■■□□□ 1.95
SCAMP5-213ENST00000567535 KLHL34Q8N239 644 aa27.26■■□□□ 1.95
SCAMP5-213ENST00000567535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.25■■□□□ 1.95
SCAMP5-213ENST00000567535 C4BP0C0L5 1744 aa27.24■■□□□ 1.95
SCAMP5-213ENST00000567535 MSH5O43196 834 aa27.24■■□□□ 1.95
SCAMP5-213ENST00000567535 SMARCC1Q92922 1105 aaPredicted RBP27.24■■□□□ 1.95
SCAMP5-213ENST00000567535 HSPA5P11021 654 aaKnown RBP27.23■■□□□ 1.95
SCAMP5-213ENST00000567535 ZNF784Q8NCA9 323 aaPredicted RBP27.22■■□□□ 1.95
SCAMP5-213ENST00000567535 PIGBQ92521 554 aa27.22■■□□□ 1.95
SCAMP5-213ENST00000567535 GOLGB1Q14789 3259 aaKnown RBP27.22■■□□□ 1.95
SCAMP5-213ENST00000567535 PLEKHG2Q9H7P9 1386 aa27.22■■□□□ 1.95
SCAMP5-213ENST00000567535 TNNT2P45379 298 aaPredicted RBP27.21■■□□□ 1.95
SCAMP5-213ENST00000567535 GPR162Q16538 588 aa27.21■■□□□ 1.95
SCAMP5-213ENST00000567535 EIF4A2Q14240 407 aaKnown RBP27.2■■□□□ 1.94
SCAMP5-213ENST00000567535 FLAD1Q8NFF5 587 aa27.2■■□□□ 1.94
SCAMP5-213ENST00000567535 NLGN2Q8NFZ4 835 aa27.19■■□□□ 1.94
SCAMP5-213ENST00000567535 MSL1Q68DK7 614 aa27.18■■□□□ 1.94
SCAMP5-213ENST00000567535 PANK3Q9H999 370 aa27.18■■□□□ 1.94
SCAMP5-213ENST00000567535 UBR3Q6ZT12 1888 aa27.18■■□□□ 1.94
SCAMP5-213ENST00000567535 PHKG2P15735 406 aa27.17■■□□□ 1.94
SCAMP5-213ENST00000567535 IFNL2Q8IZJ0 200 aa27.17■■□□□ 1.94
SCAMP5-213ENST00000567535 AK7Q96M32 723 aa27.16■■□□□ 1.94
SCAMP5-213ENST00000567535 TMOD3Q9NYL9 352 aa27.16■■□□□ 1.94
SCAMP5-213ENST00000567535 IGSF1Q8N6C5 1336 aa27.16■■□□□ 1.94
SCAMP5-213ENST00000567535 CCER1Q8TC90 406 aaPredicted RBP27.14■■□□□ 1.94
SCAMP5-213ENST00000567535 LOC102724428A0A0B4J2F2 783 aa27.13■■□□□ 1.93
SCAMP5-213ENST00000567535 SIK1P57059 783 aa27.13■■□□□ 1.93
SCAMP5-213ENST00000567535 AMIGO3Q86WK7 504 aa27.13■■□□□ 1.93
SCAMP5-213ENST00000567535 PELP1Q8IZL8 1130 aaKnown RBP27.13■■□□□ 1.93
SCAMP5-213ENST00000567535 ASAP1Q9ULH1 1129 aa27.11■■□□□ 1.93
SCAMP5-213ENST00000567535 LINC00116Q8NCU8 138 aa27.1■■□□□ 1.93
SCAMP5-213ENST00000567535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.09■■□□□ 1.93
SCAMP5-213ENST00000567535 PHF14O94880 888 aa27.08■■□□□ 1.93
SCAMP5-213ENST00000567535 SSFA2P28290 1259 aa27.08■■□□□ 1.93
SCAMP5-213ENST00000567535 CD2APQ9Y5K6 639 aa27.08■■□□□ 1.93
SCAMP5-213ENST00000567535 YBX3P16989 372 aaKnown RBP eCLIP27.07■■□□□ 1.92
SCAMP5-213ENST00000567535 ZNF831Q5JPB2 1677 aa27.06■■□□□ 1.92
SCAMP5-213ENST00000567535 ITPK1Q13572 414 aa27.06■■□□□ 1.92
SCAMP5-213ENST00000567535 MORC1Q86VD1 984 aa27.06■■□□□ 1.92
SCAMP5-213ENST00000567535 ATG3Q9NT62 314 aa27.06■■□□□ 1.92
SCAMP5-213ENST00000567535 KDRP35968 1356 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms