RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 KIF7Q2M1P5 1343 aa24.86■■□□□ 1.57
COMMD4-218ENST00000567377 MAP2P11137 1827 aaKnown RBP24.86■■□□□ 1.57
COMMD4-218ENST00000567377 TXNRD1Q16881 649 aa24.86■■□□□ 1.57
COMMD4-218ENST00000567377 ANKRD26Q9UPS8 1709 aa24.86■■□□□ 1.57
COMMD4-218ENST00000567377 RGPD2P0DJD1 1756 aa24.85■■□□□ 1.57
COMMD4-218ENST00000567377 PROM2Q8N271 834 aa24.85■■□□□ 1.57
COMMD4-218ENST00000567377 USHBP1Q8N6Y0 703 aa24.85■■□□□ 1.57
COMMD4-218ENST00000567377 LRP5O75197 1615 aa24.85■■□□□ 1.57
COMMD4-218ENST00000567377 MEGF6O75095 1541 aa24.85■■□□□ 1.57
COMMD4-218ENST00000567377 MORC1Q86VD1 984 aa24.84■■□□□ 1.57
COMMD4-218ENST00000567377 TNNT2P45379 298 aaPredicted RBP24.82■■□□□ 1.56
COMMD4-218ENST00000567377 PCDH11XQ9BZA7 1347 aa24.82■■□□□ 1.56
COMMD4-218ENST00000567377 PCDH11YQ9BZA8 1340 aa24.82■■□□□ 1.56
COMMD4-218ENST00000567377 NCAPD2Q15021 1401 aa24.81■■□□□ 1.56
COMMD4-218ENST00000567377 EYA1Q99502 592 aa24.79■■□□□ 1.56
COMMD4-218ENST00000567377 STK32BQ9NY57 414 aa24.79■■□□□ 1.56
COMMD4-218ENST00000567377 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.79■■□□□ 1.56
COMMD4-218ENST00000567377 PLEKHG2Q9H7P9 1386 aa24.79■■□□□ 1.56
COMMD4-218ENST00000567377 PRIM1P49642 420 aaKnown RBP24.78■■□□□ 1.56
COMMD4-218ENST00000567377 SPG7Q9UQ90 795 aa24.78■■□□□ 1.56
COMMD4-218ENST00000567377 HMGB2P26583 209 aaKnown RBP24.77■■□□□ 1.56
COMMD4-218ENST00000567377 AMER1Q5JTC6 1135 aaPredicted RBP24.77■■□□□ 1.56
COMMD4-218ENST00000567377 SLC27A3Q5K4L6 730 aa24.77■■□□□ 1.56
COMMD4-218ENST00000567377 SYTL4Q96C24 671 aaPredicted RBP24.77■■□□□ 1.56
COMMD4-218ENST00000567377 EIF4A2Q14240 407 aaKnown RBP24.76■■□□□ 1.55
COMMD4-218ENST00000567377 BTAF1O14981 1849 aa24.76■■□□□ 1.55
COMMD4-218ENST00000567377 SLC15A2Q16348 729 aa24.75■■□□□ 1.55
COMMD4-218ENST00000567377 ANO8Q9HCE9 1232 aaPredicted RBP24.75■■□□□ 1.55
COMMD4-218ENST00000567377 SPON1Q9HCB6 807 aa24.74■■□□□ 1.55
COMMD4-218ENST00000567377 SHANK3Q9BYB0 1731 aa24.74■■□□□ 1.55
COMMD4-218ENST00000567377 PER1O15534 1290 aaPredicted RBP24.73■■□□□ 1.55
COMMD4-218ENST00000567377 CYP27B1O15528 508 aa24.71■■□□□ 1.55
COMMD4-218ENST00000567377 NKX1-1Q15270 411 aaPredicted RBP24.71■■□□□ 1.55
COMMD4-218ENST00000567377 IGSF1Q8N6C5 1336 aa24.7■■□□□ 1.54
COMMD4-218ENST00000567377 NPC1L1Q9UHC9 1359 aa24.69■■□□□ 1.54
COMMD4-218ENST00000567377 PKD1L3Q7Z443 1732 aa24.68■■□□□ 1.54
COMMD4-218ENST00000567377 DOT1LQ8TEK3 1739 aa24.68■■□□□ 1.54
COMMD4-218ENST00000567377 IFNL2Q8IZJ0 200 aa24.67■■□□□ 1.54
COMMD4-218ENST00000567377 LRRC4BQ9NT99 713 aa24.67■■□□□ 1.54
COMMD4-218ENST00000567377 SMARCC1Q92922 1105 aaPredicted RBP24.65■■□□□ 1.54
COMMD4-218ENST00000567377 AMOTQ4VCS5 1084 aa24.64■■□□□ 1.54
COMMD4-218ENST00000567377 PLEKHO1Q53GL0 409 aaPredicted RBP24.64■■□□□ 1.54
COMMD4-218ENST00000567377 MPRIPQ6WCQ1 1025 aa24.63■■□□□ 1.53
COMMD4-218ENST00000567377 PPP1R1BQ9UD71 204 aaPredicted RBP24.63■■□□□ 1.53
COMMD4-218ENST00000567377 PAPPAQ13219 1627 aa24.62■■□□□ 1.53
COMMD4-218ENST00000567377 HSP90AB1P08238 724 aaKnown RBP24.62■■□□□ 1.53
COMMD4-218ENST00000567377 PHKG2P15735 406 aa24.62■■□□□ 1.53
COMMD4-218ENST00000567377 CCNL1Q9UK58 526 aaPredicted RBP24.62■■□□□ 1.53
COMMD4-218ENST00000567377 IL13P35225 146 aa24.61■■□□□ 1.53
COMMD4-218ENST00000567377 MTHFSP49914 203 aa24.61■■□□□ 1.53
COMMD4-218ENST00000567377 CC2D1BQ5T0F9 858 aaKnown RBP24.61■■□□□ 1.53
COMMD4-218ENST00000567377 AKT1S1Q96B36 256 aa24.61■■□□□ 1.53
COMMD4-218ENST00000567377 MTFR1LQ9H019 292 aa24.61■■□□□ 1.53
COMMD4-218ENST00000567377 CASZ1Q86V15 1759 aa24.61■■□□□ 1.53
COMMD4-218ENST00000567377 SLC16A10Q8TF71 515 aa24.6■■□□□ 1.53
COMMD4-218ENST00000567377 LY75O60449 1722 aa24.6■■□□□ 1.53
COMMD4-218ENST00000567377 ZNF827Q17R98 1081 aa24.58■■□□□ 1.53
COMMD4-218ENST00000567377 TMOD3Q9NYL9 352 aa24.58■■□□□ 1.53
COMMD4-218ENST00000567377 TFCP2L1Q9NZI6 479 aa24.58■■□□□ 1.53
COMMD4-218ENST00000567377 KDRP35968 1356 aa24.57■■□□□ 1.52
COMMD4-218ENST00000567377 PALLDQ8WX93 1383 aa24.57■■□□□ 1.52
COMMD4-218ENST00000567377 ZBTB7AO95365 584 aa24.57■■□□□ 1.52
COMMD4-218ENST00000567377 SULT6B1Q6IMI4 303 aa24.57■■□□□ 1.52
COMMD4-218ENST00000567377 PIGBQ92521 554 aa24.57■■□□□ 1.52
COMMD4-218ENST00000567377 DCAF5Q96JK2 942 aa24.57■■□□□ 1.52
COMMD4-218ENST00000567377 PDGFDQ9GZP0 370 aaPredicted RBP24.57■■□□□ 1.52
COMMD4-218ENST00000567377 ERVV-2B6SEH9 535 aa24.56■■□□□ 1.52
COMMD4-218ENST00000567377 DIAPH1O60610 1272 aaKnown RBP24.54■■□□□ 1.52
COMMD4-218ENST00000567377 ZNF530Q6P9A1 599 aaPredicted RBP24.54■■□□□ 1.52
COMMD4-218ENST00000567377 ITGB4P16144 1822 aa24.54■■□□□ 1.52
COMMD4-218ENST00000567377 C1orf141Q5JVX7 400 aa24.53■■□□□ 1.52
COMMD4-218ENST00000567377 ATF5Q9Y2D1 282 aaPredicted RBP24.53■■□□□ 1.52
COMMD4-218ENST00000567377 PTGER2P43116 358 aa24.52■■□□□ 1.52
COMMD4-218ENST00000567377 KCNQ4P56696 695 aa24.52■■□□□ 1.52
COMMD4-218ENST00000567377 AEBP1Q8IUX7 1158 aa24.52■■□□□ 1.52
COMMD4-218ENST00000567377 QSER1Q2KHR3 1735 aa24.52■■□□□ 1.52
COMMD4-218ENST00000567377 FLAD1Q8NFF5 587 aa24.51■■□□□ 1.51
COMMD4-218ENST00000567377 TOGARAM1Q9Y4F4 1720 aa24.51■■□□□ 1.51
COMMD4-218ENST00000567377 PNPLA7Q6ZV29 1317 aa24.5■■□□□ 1.51
COMMD4-218ENST00000567377 DCAF8L1A6NGE4 600 aa24.48■■□□□ 1.51
COMMD4-218ENST00000567377 SGIP1Q9BQI5 828 aa24.48■■□□□ 1.51
COMMD4-218ENST00000567377 LOC102724428A0A0B4J2F2 783 aa24.47■■□□□ 1.51
COMMD4-218ENST00000567377 SIK1P57059 783 aa24.47■■□□□ 1.51
COMMD4-218ENST00000567377 POLD1P28340 1107 aa24.46■■□□□ 1.51
COMMD4-218ENST00000567377 CABP4P57796 275 aa24.46■■□□□ 1.51
COMMD4-218ENST00000567377 CFAP53Q96M91 514 aa24.46■■□□□ 1.51
COMMD4-218ENST00000567377 ASAP1Q9ULH1 1129 aa24.46■■□□□ 1.51
COMMD4-218ENST00000567377 AKAP4Q5JQC9 854 aa24.45■■□□□ 1.5
COMMD4-218ENST00000567377 ARXQ96QS3 562 aa24.45■■□□□ 1.5
COMMD4-218ENST00000567377 ATG3Q9NT62 314 aa24.44■■□□□ 1.5
COMMD4-218ENST00000567377 CNGB1Q14028 1251 aaPredicted RBP24.43■■□□□ 1.5
COMMD4-218ENST00000567377 AK7Q96M32 723 aa24.43■■□□□ 1.5
COMMD4-218ENST00000567377 C5P01031 1676 aa24.43■■□□□ 1.5
COMMD4-218ENST00000567377 HMOX1P09601 288 aa24.42■■□□□ 1.5
COMMD4-218ENST00000567377 TAF1LQ8IZX4 1826 aa24.41■■□□□ 1.5
COMMD4-218ENST00000567377 MSH5O43196 834 aa24.41■■□□□ 1.5
COMMD4-218ENST00000567377 ATP6V1AP38606 617 aa24.41■■□□□ 1.5
COMMD4-218ENST00000567377 COL23A1Q86Y22 540 aaPredicted RBP24.41■■□□□ 1.5
COMMD4-218ENST00000567377 KDM6AO15550 1401 aaPredicted RBP24.41■■□□□ 1.5
COMMD4-218ENST00000567377 NUDCQ9Y266 331 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms