RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ARHGEF25Q86VW2 580 aa14.28□□□□□ -0.12
CAPN3-216ENST00000567071 SMC1BQ8NDV3 1235 aa14.28□□□□□ -0.12
CAPN3-216ENST00000567071 KDM2BQ8NHM5 1336 aa14.28□□□□□ -0.12
CAPN3-216ENST00000567071 PLEKHG2Q9H7P9 1386 aa14.28□□□□□ -0.12
CAPN3-216ENST00000567071 LY75O60449 1722 aa14.27□□□□□ -0.13
CAPN3-216ENST00000567071 NLRP2Q9NX02 1062 aa14.26□□□□□ -0.13
CAPN3-216ENST00000567071 SOX12O15370 315 aa14.25□□□□□ -0.13
CAPN3-216ENST00000567071 SRPK2P78362 688 aaKnown RBP14.24□□□□□ -0.13
CAPN3-216ENST00000567071 ARHGAP27Q6ZUM4 889 aa14.24□□□□□ -0.13
CAPN3-216ENST00000567071 C10orf71Q711Q0 1435 aa14.24□□□□□ -0.13
CAPN3-216ENST00000567071 DDX54Q8TDD1 881 aaKnown RBP14.23□□□□□ -0.13
CAPN3-216ENST00000567071 MPHOSPH9Q99550 1183 aa14.23□□□□□ -0.13
CAPN3-216ENST00000567071 MLLT1Q03111 559 aaPredicted RBP14.22□□□□□ -0.13
CAPN3-216ENST00000567071 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
CAPN3-216ENST00000567071 PRDM10Q9NQV6 1147 aa14.22□□□□□ -0.13
CAPN3-216ENST00000567071 BCS1LQ9Y276 419 aa14.22□□□□□ -0.13
CAPN3-216ENST00000567071 TNRC6CQ9HCJ0 1690 aaKnown RBP14.22□□□□□ -0.13
CAPN3-216ENST00000567071 USP47Q96K76 1375 aa14.22□□□□□ -0.13
CAPN3-216ENST00000567071 QRICH2Q9H0J4 1663 aa14.21□□□□□ -0.13
CAPN3-216ENST00000567071 PRIM1P49642 420 aaKnown RBP14.21□□□□□ -0.13
CAPN3-216ENST00000567071 ANKRD36BQ8N2N9 1353 aa14.21□□□□□ -0.14
CAPN3-216ENST00000567071 RRAGCQ9HB90 399 aa14.2□□□□□ -0.14
CAPN3-216ENST00000567071 C5P01031 1676 aa14.2□□□□□ -0.14
CAPN3-216ENST00000567071 DOT1LQ8TEK3 1739 aa14.19□□□□□ -0.14
CAPN3-216ENST00000567071 C9orf131Q5VYM1 1079 aa14.19□□□□□ -0.14
CAPN3-216ENST00000567071 AIDAQ96BJ3 306 aa14.19□□□□□ -0.14
CAPN3-216ENST00000567071 KDM2AQ9Y2K7 1162 aa14.19□□□□□ -0.14
CAPN3-216ENST00000567071 KCPQ6ZWJ8 1503 aa14.19□□□□□ -0.14
CAPN3-216ENST00000567071 ERBB3P21860 1342 aa14.18□□□□□ -0.14
CAPN3-216ENST00000567071 NSD3Q9BZ95 1437 aa14.18□□□□□ -0.14
CAPN3-216ENST00000567071 PKD1L3Q7Z443 1732 aa14.18□□□□□ -0.14
CAPN3-216ENST00000567071 AK7Q96M32 723 aa14.17□□□□□ -0.14
CAPN3-216ENST00000567071 FCHSD2O94868 740 aa14.16□□□□□ -0.14
CAPN3-216ENST00000567071 CTCFP49711 727 aaPredicted RBP14.16□□□□□ -0.14
CAPN3-216ENST00000567071 STAC3Q96MF2 364 aa14.16□□□□□ -0.14
CAPN3-216ENST00000567071 PXDNLA1KZ92 1463 aa14.16□□□□□ -0.14
CAPN3-216ENST00000567071 USP54Q70EL1 1684 aa14.16□□□□□ -0.14
CAPN3-216ENST00000567071 FOXN1O15353 648 aa14.15□□□□□ -0.14
CAPN3-216ENST00000567071 TGFB2P61812 414 aa14.15□□□□□ -0.14
CAPN3-216ENST00000567071 ABHD8Q96I13 439 aa14.15□□□□□ -0.14
CAPN3-216ENST00000567071 CABP1Q9NZU7 370 aa14.15□□□□□ -0.14
CAPN3-216ENST00000567071 KIAA1210Q9ULL0 1709 aa14.15□□□□□ -0.14
CAPN3-216ENST00000567071 DCAF11Q8TEB1 546 aa14.14□□□□□ -0.15
CAPN3-216ENST00000567071 CABP2Q9NPB3 220 aa14.14□□□□□ -0.15
CAPN3-216ENST00000567071 RNF181Q9P0P0 153 aa14.14□□□□□ -0.15
CAPN3-216ENST00000567071 NFAT5O94916 1531 aa14.14□□□□□ -0.15
CAPN3-216ENST00000567071 N4BP2Q86UW6 1770 aaPredicted RBP14.14□□□□□ -0.15
CAPN3-216ENST00000567071 NSD2O96028 1365 aa14.13□□□□□ -0.15
CAPN3-216ENST00000567071 PHF14O94880 888 aa14.13□□□□□ -0.15
CAPN3-216ENST00000567071 ANKRD24Q8TF21 1146 aa14.13□□□□□ -0.15
CAPN3-216ENST00000567071 TAF1LQ8IZX4 1826 aa14.13□□□□□ -0.15
CAPN3-216ENST00000567071 TTC21AQ8NDW8 1320 aa14.13□□□□□ -0.15
CAPN3-216ENST00000567071 HOXD11P31277 338 aaPredicted RBP14.12□□□□□ -0.15
CAPN3-216ENST00000567071 TTC21BQ7Z4L5 1316 aa14.12□□□□□ -0.15
CAPN3-216ENST00000567071 KIF13BQ9NQT8 1826 aa14.11□□□□□ -0.15
CAPN3-216ENST00000567071 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
CAPN3-216ENST00000567071 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.1□□□□□ -0.15
CAPN3-216ENST00000567071 A0A0G2JLW4 131 aa14.1□□□□□ -0.15
CAPN3-216ENST00000567071 VEGFAP15692 232 aaPredicted RBP14.1□□□□□ -0.15
CAPN3-216ENST00000567071 MKRN1Q9UHC7 482 aaKnown RBP14.1□□□□□ -0.15
CAPN3-216ENST00000567071 PDE4DIPQ5VU43 2346 aa14.1□□□□□ -0.15
CAPN3-216ENST00000567071 C4BP0C0L5 1744 aa14.1□□□□□ -0.15
CAPN3-216ENST00000567071 ARFGEF1Q9Y6D6 1849 aa14.09□□□□□ -0.15
CAPN3-216ENST00000567071 CCDC85CA6NKD9 419 aa14.09□□□□□ -0.15
CAPN3-216ENST00000567071 SSFA2P28290 1259 aa14.09□□□□□ -0.15
CAPN3-216ENST00000567071 PPARGC1BQ86YN6 1023 aaKnown RBP14.09□□□□□ -0.15
CAPN3-216ENST00000567071 LTN1O94822 1766 aa14.09□□□□□ -0.15
CAPN3-216ENST00000567071 UBR3Q6ZT12 1888 aa14.08□□□□□ -0.16
CAPN3-216ENST00000567071 MMP10P09238 476 aa14.08□□□□□ -0.16
CAPN3-216ENST00000567071 RGS19P49795 217 aa14.08□□□□□ -0.16
CAPN3-216ENST00000567071 CREBZFQ9NS37 354 aa14.08□□□□□ -0.16
CAPN3-216ENST00000567071 ZC3H4Q9UPT8 1303 aaKnown RBP14.08□□□□□ -0.16
CAPN3-216ENST00000567071 PALLDQ8WX93 1383 aa14.08□□□□□ -0.16
CAPN3-216ENST00000567071 FAM208AQ9UK61 1670 aaKnown RBP14.07□□□□□ -0.16
CAPN3-216ENST00000567071 KIAA1551Q9HCM1 1747 aa14.07□□□□□ -0.16
CAPN3-216ENST00000567071 ZCRB1Q8TBF4 217 aaKnown RBP14.07□□□□□ -0.16
CAPN3-216ENST00000567071 LBX1P52954 281 aa14.06□□□□□ -0.16
CAPN3-216ENST00000567071 CCDC87Q9NVE4 849 aa14.06□□□□□ -0.16
CAPN3-216ENST00000567071 CENPJQ9HC77 1338 aaPredicted RBP14.06□□□□□ -0.16
CAPN3-216ENST00000567071 BRCA1P38398 1863 aaKnown RBP14.06□□□□□ -0.16
CAPN3-216ENST00000567071 TOGARAM1Q9Y4F4 1720 aa14.05□□□□□ -0.16
CAPN3-216ENST00000567071 DPEP1P16444 411 aa14.05□□□□□ -0.16
CAPN3-216ENST00000567071 SMARCC1Q92922 1105 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-216ENST00000567071 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-216ENST00000567071 PIM2Q9P1W9 311 aa14.04□□□□□ -0.16
CAPN3-216ENST00000567071 SBF1O95248 1867 aa14.04□□□□□ -0.16
CAPN3-216ENST00000567071 DALRD3Q5D0E6 543 aaKnown RBP14.03□□□□□ -0.16
CAPN3-216ENST00000567071 SMIM5Q71RC9 77 aa14.03□□□□□ -0.16
CAPN3-216ENST00000567071 CFAP44Q96MT7 982 aa14.03□□□□□ -0.16
CAPN3-216ENST00000567071 CNTNAP1P78357 1384 aa14.03□□□□□ -0.16
CAPN3-216ENST00000567071 GLTPD2A6NH11 291 aa14.02□□□□□ -0.17
CAPN3-216ENST00000567071 KTN1Q86UP2 1357 aaKnown RBP14.01□□□□□ -0.17
CAPN3-216ENST00000567071 AMIGO3Q86WK7 504 aa14.01□□□□□ -0.17
CAPN3-216ENST00000567071 NLGN1Q8N2Q7 840 aa14.01□□□□□ -0.17
CAPN3-216ENST00000567071 LTV1Q96GA3 475 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-216ENST00000567071 DCAF5Q96JK2 942 aa14.01□□□□□ -0.17
CAPN3-216ENST00000567071 EVC2Q86UK5 1308 aa14□□□□□ -0.17
CAPN3-216ENST00000567071 GNPATO15228 680 aa14□□□□□ -0.17
CAPN3-216ENST00000567071 WBP1LQ9NX94 342 aa14□□□□□ -0.17
CAPN3-216ENST00000567071 TMF1P82094 1093 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms