RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 KAT6BQ8WYB5 2073 aa19.72■□□□□ 0.75
COMMD4-216ENST00000567023 HSPA5P11021 654 aaKnown RBP19.71■□□□□ 0.75
COMMD4-216ENST00000567023 RAPGEF4Q8WZA2 1011 aa19.71■□□□□ 0.75
COMMD4-216ENST00000567023 SHANK3Q9BYB0 1731 aa19.71■□□□□ 0.75
COMMD4-216ENST00000567023 LRRC4BQ9NT99 713 aa19.7■□□□□ 0.74
COMMD4-216ENST00000567023 EMILIN1Q9Y6C2 1016 aa19.7■□□□□ 0.74
COMMD4-216ENST00000567023 PRIM1P49642 420 aaKnown RBP19.69■□□□□ 0.74
COMMD4-216ENST00000567023 SLC27A3Q5K4L6 730 aa19.69■□□□□ 0.74
COMMD4-216ENST00000567023 USHBP1Q8N6Y0 703 aa19.69■□□□□ 0.74
COMMD4-216ENST00000567023 WASHC2AQ641Q2 1341 aa19.69■□□□□ 0.74
COMMD4-216ENST00000567023 PAPPAQ13219 1627 aa19.69■□□□□ 0.74
COMMD4-216ENST00000567023 TATP17735 454 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-216ENST00000567023 ANKRD26Q9UPS8 1709 aa19.68■□□□□ 0.74
COMMD4-216ENST00000567023 PPP1R1BQ9UD71 204 aaPredicted RBP19.67■□□□□ 0.74
COMMD4-216ENST00000567023 NSD2O96028 1365 aa19.67■□□□□ 0.74
COMMD4-216ENST00000567023 NCAPD2Q15021 1401 aa19.67■□□□□ 0.74
COMMD4-216ENST00000567023 PTGER2P43116 358 aa19.66■□□□□ 0.74
COMMD4-216ENST00000567023 SYTL4Q96C24 671 aaPredicted RBP19.66■□□□□ 0.74
COMMD4-216ENST00000567023 POLR3GLQ9BT43 218 aa19.66■□□□□ 0.74
COMMD4-216ENST00000567023 POLKQ9UBT6 870 aa19.66■□□□□ 0.74
COMMD4-216ENST00000567023 ZBTB7AO95365 584 aa19.65■□□□□ 0.74
COMMD4-216ENST00000567023 DOT1LQ8TEK3 1739 aa19.65■□□□□ 0.74
COMMD4-216ENST00000567023 PPM1GO15355 546 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-216ENST00000567023 AKT1S1Q96B36 256 aa19.64■□□□□ 0.73
COMMD4-216ENST00000567023 MTFR1LQ9H019 292 aa19.64■□□□□ 0.73
COMMD4-216ENST00000567023 PANK3Q9H999 370 aa19.64■□□□□ 0.73
COMMD4-216ENST00000567023 PCDH11XQ9BZA7 1347 aa19.64■□□□□ 0.73
COMMD4-216ENST00000567023 PCDH11YQ9BZA8 1340 aa19.64■□□□□ 0.73
COMMD4-216ENST00000567023 MAP2P11137 1827 aaKnown RBP19.64■□□□□ 0.73
COMMD4-216ENST00000567023 ZNF827Q17R98 1081 aa19.63■□□□□ 0.73
COMMD4-216ENST00000567023 SGIP1Q9BQI5 828 aa19.62■□□□□ 0.73
COMMD4-216ENST00000567023 CYP27B1O15528 508 aa19.61■□□□□ 0.73
COMMD4-216ENST00000567023 ATF5Q9Y2D1 282 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-216ENST00000567023 LY75O60449 1722 aa19.61■□□□□ 0.73
COMMD4-216ENST00000567023 UTRNP46939 3433 aa19.61■□□□□ 0.73
COMMD4-216ENST00000567023 EYA1Q99502 592 aa19.6■□□□□ 0.73
COMMD4-216ENST00000567023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.6■□□□□ 0.73
COMMD4-216ENST00000567023 NKX1-1Q15270 411 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-216ENST00000567023 SLC16A10Q8TF71 515 aa19.58■□□□□ 0.72
COMMD4-216ENST00000567023 PKD1L3Q7Z443 1732 aa19.58■□□□□ 0.72
COMMD4-216ENST00000567023 QSER1Q2KHR3 1735 aa19.57■□□□□ 0.72
COMMD4-216ENST00000567023 TNNT2P45379 298 aaPredicted RBP19.57■□□□□ 0.72
COMMD4-216ENST00000567023 KCNQ4P56696 695 aa19.57■□□□□ 0.72
COMMD4-216ENST00000567023 EIF4A2Q14240 407 aaKnown RBP19.57■□□□□ 0.72
COMMD4-216ENST00000567023 SPG7Q9UQ90 795 aa19.57■□□□□ 0.72
COMMD4-216ENST00000567023 PLEKHG2Q9H7P9 1386 aa19.57■□□□□ 0.72
COMMD4-216ENST00000567023 HMGB2P26583 209 aaKnown RBP19.56■□□□□ 0.72
COMMD4-216ENST00000567023 CCNL1Q9UK58 526 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-216ENST00000567023 PNPLA7Q6ZV29 1317 aa19.55■□□□□ 0.72
COMMD4-216ENST00000567023 TFCP2L1Q9NZI6 479 aa19.55■□□□□ 0.72
COMMD4-216ENST00000567023 DCAF8L1A6NGE4 600 aa19.53■□□□□ 0.72
COMMD4-216ENST00000567023 MPRIPQ6WCQ1 1025 aa19.53■□□□□ 0.72
COMMD4-216ENST00000567023 SYT17Q9BSW7 474 aa19.53■□□□□ 0.72
COMMD4-216ENST00000567023 FHDC1Q9C0D6 1143 aaPredicted RBP19.53■□□□□ 0.72
COMMD4-216ENST00000567023 IGSF1Q8N6C5 1336 aa19.52■□□□□ 0.72
COMMD4-216ENST00000567023 ARXQ96QS3 562 aa19.52■□□□□ 0.72
COMMD4-216ENST00000567023 KNSTRNQ9Y448 316 aa19.52■□□□□ 0.72
COMMD4-216ENST00000567023 TOGARAM1Q9Y4F4 1720 aa19.51■□□□□ 0.71
COMMD4-216ENST00000567023 MORC1Q86VD1 984 aa19.51■□□□□ 0.71
COMMD4-216ENST00000567023 IFNL2Q8IZJ0 200 aa19.51■□□□□ 0.71
COMMD4-216ENST00000567023 SMARCC1Q92922 1105 aaPredicted RBP19.51■□□□□ 0.71
COMMD4-216ENST00000567023 PALLDQ8WX93 1383 aa19.51■□□□□ 0.71
COMMD4-216ENST00000567023 MAP3K5Q99683 1374 aa19.51■□□□□ 0.71
COMMD4-216ENST00000567023 ITGB4P16144 1822 aa19.51■□□□□ 0.71
COMMD4-216ENST00000567023 COL24A1Q17RW2 1714 aa19.51■□□□□ 0.71
COMMD4-216ENST00000567023 KIF7Q2M1P5 1343 aa19.51■□□□□ 0.71
COMMD4-216ENST00000567023 PHKG2P15735 406 aa19.5■□□□□ 0.71
COMMD4-216ENST00000567023 AMER1Q5JTC6 1135 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-216ENST00000567023 PIGBQ92521 554 aa19.5■□□□□ 0.71
COMMD4-216ENST00000567023 TUBGCP6Q96RT7 1819 aa19.49■□□□□ 0.71
COMMD4-216ENST00000567023 GOLGB1Q14789 3259 aaKnown RBP19.48■□□□□ 0.71
COMMD4-216ENST00000567023 C5P01031 1676 aa19.46■□□□□ 0.71
COMMD4-216ENST00000567023 PER1O15534 1290 aaPredicted RBP19.46■□□□□ 0.71
COMMD4-216ENST00000567023 POLD1P28340 1107 aa19.46■□□□□ 0.71
COMMD4-216ENST00000567023 COL23A1Q86Y22 540 aaPredicted RBP19.46■□□□□ 0.71
COMMD4-216ENST00000567023 FLAD1Q8NFF5 587 aa19.45■□□□□ 0.7
COMMD4-216ENST00000567023 TMOD3Q9NYL9 352 aa19.45■□□□□ 0.7
COMMD4-216ENST00000567023 TAF1LQ8IZX4 1826 aa19.45■□□□□ 0.7
COMMD4-216ENST00000567023 YY1P25490 414 aa19.44■□□□□ 0.7
COMMD4-216ENST00000567023 AMOTQ4VCS5 1084 aa19.44■□□□□ 0.7
COMMD4-216ENST00000567023 LOC102724428A0A0B4J2F2 783 aa19.43■□□□□ 0.7
COMMD4-216ENST00000567023 SIK1P57059 783 aa19.43■□□□□ 0.7
COMMD4-216ENST00000567023 PLEKHO1Q53GL0 409 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-216ENST00000567023 ERVV-2B6SEH9 535 aa19.42■□□□□ 0.7
COMMD4-216ENST00000567023 HSP90AB1P08238 724 aaKnown RBP19.42■□□□□ 0.7
COMMD4-216ENST00000567023 IL13P35225 146 aa19.42■□□□□ 0.7
COMMD4-216ENST00000567023 DCAF5Q96JK2 942 aa19.42■□□□□ 0.7
COMMD4-216ENST00000567023 ASAP1Q9ULH1 1129 aa19.42■□□□□ 0.7
COMMD4-216ENST00000567023 KDRP35968 1356 aa19.42■□□□□ 0.7
COMMD4-216ENST00000567023 ATG3Q9NT62 314 aa19.41■□□□□ 0.7
COMMD4-216ENST00000567023 C4BP0C0L5 1744 aa19.41■□□□□ 0.7
COMMD4-216ENST00000567023 MSH5O43196 834 aa19.4■□□□□ 0.7
COMMD4-216ENST00000567023 AEBP1Q8IUX7 1158 aa19.4■□□□□ 0.7
COMMD4-216ENST00000567023 SULT6B1Q6IMI4 303 aa19.39■□□□□ 0.69
COMMD4-216ENST00000567023 MTHFSP49914 203 aa19.38■□□□□ 0.69
COMMD4-216ENST00000567023 AK7Q96M32 723 aa19.38■□□□□ 0.69
COMMD4-216ENST00000567023 NPC1L1Q9UHC9 1359 aa19.37■□□□□ 0.69
COMMD4-216ENST00000567023 ZNF530Q6P9A1 599 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-216ENST00000567023 AMIGO3Q86WK7 504 aa19.37■□□□□ 0.69
COMMD4-216ENST00000567023 LINC00116Q8NCU8 138 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms