RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 MAP3K5Q99683 1374 aa20.53■□□□□ 0.88
VAC14-208ENST00000566655 GNAT3A8MTJ3 354 aa20.53■□□□□ 0.88
VAC14-208ENST00000566655 UBAP1LF5GYI3 381 aa20.53■□□□□ 0.88
VAC14-208ENST00000566655 CHL1O00533 1208 aa20.53■□□□□ 0.88
VAC14-208ENST00000566655 BCAR3O75815 825 aa20.53■□□□□ 0.88
VAC14-208ENST00000566655 IL17REQ8NFR9 667 aa20.53■□□□□ 0.88
VAC14-208ENST00000566655 PLIN1O60240 522 aa20.52■□□□□ 0.88
VAC14-208ENST00000566655 PIP4K2BP78356 416 aa20.52■□□□□ 0.88
VAC14-208ENST00000566655 NLRP2Q9NX02 1062 aa20.52■□□□□ 0.88
VAC14-208ENST00000566655 WDR17Q8IZU2 1322 aa20.51■□□□□ 0.87
VAC14-208ENST00000566655 AMOTQ4VCS5 1084 aa20.51■□□□□ 0.87
VAC14-208ENST00000566655 PLEKHO1Q53GL0 409 aaPredicted RBP20.51■□□□□ 0.87
VAC14-208ENST00000566655 CERKQ8TCT0 537 aa20.51■□□□□ 0.87
VAC14-208ENST00000566655 PLEKHG2Q9H7P9 1386 aa20.51■□□□□ 0.87
VAC14-208ENST00000566655 LRRC37A3O60309 1634 aa20.5■□□□□ 0.87
VAC14-208ENST00000566655 HAP1P54257 671 aaPredicted RBP20.5■□□□□ 0.87
VAC14-208ENST00000566655 LAS1LQ9Y4W2 734 aaKnown RBP20.5■□□□□ 0.87
VAC14-208ENST00000566655 CEMIPQ8WUJ3 1361 aa20.5■□□□□ 0.87
VAC14-208ENST00000566655 CSB-PGBD3P0DP91 1061 aa20.49■□□□□ 0.87
VAC14-208ENST00000566655 RTF1Q92541 710 aaKnown RBP20.49■□□□□ 0.87
VAC14-208ENST00000566655 MEGF6O75095 1541 aa20.49■□□□□ 0.87
VAC14-208ENST00000566655 PHLPP1O60346 1717 aa20.49■□□□□ 0.87
VAC14-208ENST00000566655 AKAP4Q5JQC9 854 aa20.48■□□□□ 0.87
VAC14-208ENST00000566655 C20orf194Q5TEA3 1177 aa20.47■□□□□ 0.87
VAC14-208ENST00000566655 VAMP4O75379 141 aa20.46■□□□□ 0.87
VAC14-208ENST00000566655 ZNF530Q6P9A1 599 aaPredicted RBP20.46■□□□□ 0.87
VAC14-208ENST00000566655 TSPYL6Q8N831 410 aa20.46■□□□□ 0.87
VAC14-208ENST00000566655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.46■□□□□ 0.872e-7■■□□□ 13.3
VAC14-208ENST00000566655 LARP1Q6PKG0 1096 aaKnown RBP20.46■□□□□ 0.87
VAC14-208ENST00000566655 C8orf58Q8NAV2 365 aa20.46■□□□□ 0.87
VAC14-208ENST00000566655 CARD10Q9BWT7 1032 aa20.46■□□□□ 0.87
VAC14-208ENST00000566655 TATP17735 454 aaPredicted RBP20.45■□□□□ 0.86
VAC14-208ENST00000566655 RAPGEF4Q8WZA2 1011 aa20.45■□□□□ 0.86
VAC14-208ENST00000566655 LGR6Q9HBX8 967 aa20.45■□□□□ 0.86
VAC14-208ENST00000566655 SSH1Q8WYL5 1049 aa20.44■□□□□ 0.86
VAC14-208ENST00000566655 BABAM1Q9NWV8 329 aa20.44■□□□□ 0.86
VAC14-208ENST00000566655 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.43■□□□□ 0.86
VAC14-208ENST00000566655 EXOC6Q8TAG9 804 aa20.43■□□□□ 0.86
VAC14-208ENST00000566655 ZNF428Q96B54 188 aa20.43■□□□□ 0.86
VAC14-208ENST00000566655 PPP4R2Q9NY27 417 aa20.43■□□□□ 0.86
VAC14-208ENST00000566655 MIS18AQ9NYP9 233 aa20.43■□□□□ 0.86
VAC14-208ENST00000566655 ALDH1L2Q3SY69 923 aa20.42■□□□□ 0.86
VAC14-208ENST00000566655 TOM1L2Q6ZVM7 507 aa20.42■□□□□ 0.86
VAC14-208ENST00000566655 BTG4Q9NY30 223 aa20.42■□□□□ 0.86
VAC14-208ENST00000566655 OVOS2A0A0G2JMS6 1433 aa20.42■□□□□ 0.86
VAC14-208ENST00000566655 COL14A1Q05707 1796 aaKnown RBP20.42■□□□□ 0.86
VAC14-208ENST00000566655 RNMTO43148 476 aaKnown RBP20.41■□□□□ 0.86
VAC14-208ENST00000566655 BRPF1P55201 1214 aaPredicted RBP20.41■□□□□ 0.86
VAC14-208ENST00000566655 TAF7Q15545 349 aaPredicted RBP20.41■□□□□ 0.86
VAC14-208ENST00000566655 BCL2L13Q9BXK5 485 aa20.41■□□□□ 0.86
VAC14-208ENST00000566655 ADAMTS7Q9UKP4 1686 aa20.41■□□□□ 0.86
VAC14-208ENST00000566655 PHKG2P15735 406 aa20.4■□□□□ 0.86
VAC14-208ENST00000566655 KRT24Q2M2I5 525 aa20.4■□□□□ 0.86
VAC14-208ENST00000566655 MPRIPQ6WCQ1 1025 aa20.4■□□□□ 0.86
VAC14-208ENST00000566655 CRBNQ96SW2 442 aa20.4■□□□□ 0.86
VAC14-208ENST00000566655 TSPYL4Q9UJ04 414 aa20.4■□□□□ 0.86
VAC14-208ENST00000566655 EVA1CP58658 441 aa20.39■□□□□ 0.85
VAC14-208ENST00000566655 TWISTNBQ3B726 338 aaPredicted RBP20.39■□□□□ 0.85
VAC14-208ENST00000566655 C1orf141Q5JVX7 400 aa20.39■□□□□ 0.85
VAC14-208ENST00000566655 STRN4Q9NRL3 753 aa20.39■□□□□ 0.85
VAC14-208ENST00000566655 SPG7Q9UQ90 795 aa20.39■□□□□ 0.85
VAC14-208ENST00000566655 CYP27B1O15528 508 aa20.38■□□□□ 0.85
VAC14-208ENST00000566655 PDE3AQ14432 1141 aa20.38■□□□□ 0.85
VAC14-208ENST00000566655 KDM6AO15550 1401 aaPredicted RBP20.38■□□□□ 0.85
VAC14-208ENST00000566655 MRPL50Q8N5N7 158 aaKnown RBP20.37■□□□□ 0.85
VAC14-208ENST00000566655 SMC4Q9NTJ3 1288 aa20.37■□□□□ 0.85
VAC14-208ENST00000566655 TNNQ9UQP3 1299 aa20.37■□□□□ 0.85
VAC14-208ENST00000566655 PKD1L3Q7Z443 1732 aa20.37■□□□□ 0.85
VAC14-208ENST00000566655 ELL2O00472 640 aaPredicted RBP20.36■□□□□ 0.85
VAC14-208ENST00000566655 JCADQ9P266 1359 aa20.36■□□□□ 0.85
VAC14-208ENST00000566655 ADAMTS2O95450 1211 aa20.35■□□□□ 0.85
VAC14-208ENST00000566655 IFNL2Q8IZJ0 200 aa20.35■□□□□ 0.85
VAC14-208ENST00000566655 DISP2A7MBM2 1401 aa20.35■□□□□ 0.85
VAC14-208ENST00000566655 IL2RBP14784 551 aa20.34■□□□□ 0.85
VAC14-208ENST00000566655 RLBP1P12271 317 aa20.34■□□□□ 0.85
VAC14-208ENST00000566655 FRAT1Q92837 279 aaPredicted RBP20.34■□□□□ 0.85
VAC14-208ENST00000566655 NOB1Q9ULX3 412 aaKnown RBP20.34■□□□□ 0.85
VAC14-208ENST00000566655 SLIT2O94813 1529 aa20.33■□□□□ 0.84
VAC14-208ENST00000566655 NUTM2BA6NNL0 878 aaPredicted RBP20.33■□□□□ 0.84
VAC14-208ENST00000566655 NUTM2EB1AL46 878 aaPredicted RBP20.33■□□□□ 0.84
VAC14-208ENST00000566655 ZKSCAN2Q63HK3 967 aa20.33■□□□□ 0.84
VAC14-208ENST00000566655 NUTM2AQ8IVF1 878 aaPredicted RBP20.33■□□□□ 0.84
VAC14-208ENST00000566655 ZCRB1Q8TBF4 217 aaKnown RBP20.33■□□□□ 0.84
VAC14-208ENST00000566655 NKX1-1Q15270 411 aaPredicted RBP20.32■□□□□ 0.84
VAC14-208ENST00000566655 B4GALNT3Q6L9W6 998 aa20.32■□□□□ 0.84
VAC14-208ENST00000566655 PANK1Q8TE04 598 aa20.32■□□□□ 0.84
VAC14-208ENST00000566655 KCNQ3O43525 872 aa20.31■□□□□ 0.84
VAC14-208ENST00000566655 EIF4A1P60842 406 aaKnown RBP20.31■□□□□ 0.84
VAC14-208ENST00000566655 TEFQ10587 303 aa20.31■□□□□ 0.84
VAC14-208ENST00000566655 DCAF5Q96JK2 942 aa20.31■□□□□ 0.84
VAC14-208ENST00000566655 MRC1P22897 1456 aa20.3■□□□□ 0.84
VAC14-208ENST00000566655 PARP4Q9UKK3 1724 aaKnown RBP20.3■□□□□ 0.84
VAC14-208ENST00000566655 SOS1Q07889 1333 aaPredicted RBP20.3■□□□□ 0.84
VAC14-208ENST00000566655 KIF16BQ96L93 1317 aa20.3■□□□□ 0.84
VAC14-208ENST00000566655 TRIM27P14373 513 aa20.3■□□□□ 0.84
VAC14-208ENST00000566655 ATF7IPQ6VMQ6 1270 aa20.3■□□□□ 0.84
VAC14-208ENST00000566655 NRAPQ86VF7 1730 aa20.29■□□□□ 0.84
VAC14-208ENST00000566655 PCDH11XQ9BZA7 1347 aa20.29■□□□□ 0.84
VAC14-208ENST00000566655 PCDH11YQ9BZA8 1340 aa20.29■□□□□ 0.84
VAC14-208ENST00000566655 BTBD11A6QL63 1104 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms