RNA–Protein interactions for RNA: ENST00000566547.1

GGA2-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-206ENST00000566547 SYTL4Q96C24 671 aaPredicted RBP31.07■■■□□ 2.56
GGA2-206ENST00000566547 ZCRB1Q8TBF4 217 aaKnown RBP31.06■■■□□ 2.56
GGA2-206ENST00000566547 NSD3Q9BZ95 1437 aa31.06■■■□□ 2.56
GGA2-206ENST00000566547 ZNF827Q17R98 1081 aa31.05■■■□□ 2.56
GGA2-206ENST00000566547 HSP90AB2PQ58FF8 381 aa31.05■■■□□ 2.56
GGA2-206ENST00000566547 PRIM1P49642 420 aaKnown RBP31.04■■■□□ 2.56
GGA2-206ENST00000566547 KCNQ4P56696 695 aa31.02■■■□□ 2.56
GGA2-206ENST00000566547 SMG6Q86US8 1419 aaKnown RBP31.01■■■□□ 2.55
GGA2-206ENST00000566547 POLR3GLQ9BT43 218 aa30.99■■■□□ 2.55
GGA2-206ENST00000566547 MTFR1LQ9H019 292 aa30.99■■■□□ 2.55
GGA2-206ENST00000566547 EMILIN1Q9Y6C2 1016 aa30.99■■■□□ 2.55
GGA2-206ENST00000566547 NSD2O96028 1365 aa30.99■■■□□ 2.55
GGA2-206ENST00000566547 INSRP06213 1382 aa30.99■■■□□ 2.55
GGA2-206ENST00000566547 FLT4P35916 1363 aa30.99■■■□□ 2.55
GGA2-206ENST00000566547 RAPGEF4Q8WZA2 1011 aa30.97■■■□□ 2.55
GGA2-206ENST00000566547 UTRNP46939 3433 aa30.97■■■□□ 2.55
GGA2-206ENST00000566547 AKT1S1Q96B36 256 aa30.95■■■□□ 2.55
GGA2-206ENST00000566547 SGIP1Q9BQI5 828 aa30.95■■■□□ 2.55
GGA2-206ENST00000566547 LY75O60449 1722 aa30.94■■■□□ 2.54
GGA2-206ENST00000566547 TATP17735 454 aaPredicted RBP30.94■■■□□ 2.54
GGA2-206ENST00000566547 TUBGCP6Q96RT7 1819 aa30.94■■■□□ 2.54
GGA2-206ENST00000566547 PPM1GO15355 546 aaPredicted RBP30.93■■■□□ 2.54
GGA2-206ENST00000566547 SLC27A3Q5K4L6 730 aa30.93■■■□□ 2.54
GGA2-206ENST00000566547 FHDC1Q9C0D6 1143 aaPredicted RBP30.93■■■□□ 2.54
GGA2-206ENST00000566547 YY1P25490 414 aa30.92■■■□□ 2.54
GGA2-206ENST00000566547 DCAF8L1A6NGE4 600 aa30.91■■■□□ 2.54
GGA2-206ENST00000566547 CGNL1Q0VF96 1302 aa30.91■■■□□ 2.54
GGA2-206ENST00000566547 KIF24Q5T7B8 1368 aa30.91■■■□□ 2.54
GGA2-206ENST00000566547 MAP2P11137 1827 aaKnown RBP30.9■■■□□ 2.54
GGA2-206ENST00000566547 QSER1Q2KHR3 1735 aa30.88■■■□□ 2.53
GGA2-206ENST00000566547 SYT17Q9BSW7 474 aa30.88■■■□□ 2.53
GGA2-206ENST00000566547 ANKRD26Q9UPS8 1709 aa30.87■■■□□ 2.53
GGA2-206ENST00000566547 CCER1Q8TC90 406 aaPredicted RBP30.87■■■□□ 2.53
GGA2-206ENST00000566547 PNPLA7Q6ZV29 1317 aa30.87■■■□□ 2.53
GGA2-206ENST00000566547 ARXQ96QS3 562 aa30.86■■■□□ 2.53
GGA2-206ENST00000566547 TFCP2L1Q9NZI6 479 aa30.86■■■□□ 2.53
GGA2-206ENST00000566547 CCNL1Q9UK58 526 aaPredicted RBP30.86■■■□□ 2.53
GGA2-206ENST00000566547 PCDH11XQ9BZA7 1347 aa30.85■■■□□ 2.53
GGA2-206ENST00000566547 PCDH11YQ9BZA8 1340 aa30.85■■■□□ 2.53
GGA2-206ENST00000566547 CYP27B1O15528 508 aa30.85■■■□□ 2.53
GGA2-206ENST00000566547 HSPA5P11021 654 aaKnown RBP30.85■■■□□ 2.53
GGA2-206ENST00000566547 TOGARAM1Q9Y4F4 1720 aa30.84■■■□□ 2.53
GGA2-206ENST00000566547 TNNT2P45379 298 aaPredicted RBP30.83■■■□□ 2.53
GGA2-206ENST00000566547 PKD1L3Q7Z443 1732 aa30.82■■■□□ 2.52
GGA2-206ENST00000566547 EIF4G2P78344 907 aaKnown RBP eCLIP30.81■■■□□ 2.52
GGA2-206ENST00000566547 POLKQ9UBT6 870 aa30.81■■■□□ 2.52
GGA2-206ENST00000566547 ITGB4P16144 1822 aa30.8■■■□□ 2.52
GGA2-206ENST00000566547 WASHC2AQ641Q2 1341 aa30.8■■■□□ 2.52
GGA2-206ENST00000566547 MPRIPQ6WCQ1 1025 aa30.8■■■□□ 2.52
GGA2-206ENST00000566547 EYA1Q99502 592 aa30.79■■■□□ 2.52
GGA2-206ENST00000566547 NCAPD2Q15021 1401 aa30.79■■■□□ 2.52
GGA2-206ENST00000566547 KLHL34Q8N239 644 aa30.77■■■□□ 2.52
GGA2-206ENST00000566547 SLC16A10Q8TF71 515 aa30.77■■■□□ 2.52
GGA2-206ENST00000566547 GOLGB1Q14789 3259 aaKnown RBP30.77■■■□□ 2.52
GGA2-206ENST00000566547 COL24A1Q17RW2 1714 aa30.76■■■□□ 2.52
GGA2-206ENST00000566547 C5P01031 1676 aa30.76■■■□□ 2.51
GGA2-206ENST00000566547 PANK3Q9H999 370 aa30.75■■■□□ 2.51
GGA2-206ENST00000566547 MSH5O43196 834 aa30.74■■■□□ 2.51
GGA2-206ENST00000566547 PALLDQ8WX93 1383 aa30.74■■■□□ 2.51
GGA2-206ENST00000566547 TAF1LQ8IZX4 1826 aa30.73■■■□□ 2.51
GGA2-206ENST00000566547 POLD1P28340 1107 aa30.72■■■□□ 2.51
GGA2-206ENST00000566547 COL23A1Q86Y22 540 aaPredicted RBP30.72■■■□□ 2.51
GGA2-206ENST00000566547 EIF4A2Q14240 407 aaKnown RBP30.71■■■□□ 2.51
GGA2-206ENST00000566547 SPG7Q9UQ90 795 aa30.71■■■□□ 2.51
GGA2-206ENST00000566547 MAP3K5Q99683 1374 aa30.7■■■□□ 2.51
GGA2-206ENST00000566547 PIGBQ92521 554 aa30.7■■■□□ 2.51
GGA2-206ENST00000566547 MSL1Q68DK7 614 aa30.68■■■□□ 2.5
GGA2-206ENST00000566547 NKX1-1Q15270 411 aaPredicted RBP30.67■■■□□ 2.5
GGA2-206ENST00000566547 NLGN2Q8NFZ4 835 aa30.64■■■□□ 2.5
GGA2-206ENST00000566547 C4BP0C0L5 1744 aa30.64■■■□□ 2.5
GGA2-206ENST00000566547 PHKG2P15735 406 aa30.63■■■□□ 2.49
GGA2-206ENST00000566547 SMIM5Q71RC9 77 aa30.63■■■□□ 2.49
GGA2-206ENST00000566547 SMARCC1Q92922 1105 aaPredicted RBP30.63■■■□□ 2.49
GGA2-206ENST00000566547 CHD4Q14839 1912 aa30.63■■■□□ 2.49
GGA2-206ENST00000566547 AMIGO3Q86WK7 504 aa30.62■■■□□ 2.49
GGA2-206ENST00000566547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.62■■■□□ 2.49
GGA2-206ENST00000566547 GPR162Q16538 588 aa30.61■■■□□ 2.49
GGA2-206ENST00000566547 IFNL2Q8IZJ0 200 aa30.61■■■□□ 2.49
GGA2-206ENST00000566547 PELP1Q8IZL8 1130 aaKnown RBP30.61■■■□□ 2.49
GGA2-206ENST00000566547 TMOD3Q9NYL9 352 aa30.6■■■□□ 2.49
GGA2-206ENST00000566547 IGSF1Q8N6C5 1336 aa30.59■■■□□ 2.49
GGA2-206ENST00000566547 ASAP1Q9ULH1 1129 aa30.59■■■□□ 2.49
GGA2-206ENST00000566547 MORC1Q86VD1 984 aa30.58■■■□□ 2.49
GGA2-206ENST00000566547 AK7Q96M32 723 aa30.58■■■□□ 2.49
GGA2-206ENST00000566547 UBR3Q6ZT12 1888 aa30.57■■■□□ 2.48
GGA2-206ENST00000566547 PHF14O94880 888 aa30.57■■■□□ 2.48
GGA2-206ENST00000566547 LOC102724428A0A0B4J2F2 783 aa30.56■■■□□ 2.48
GGA2-206ENST00000566547 SIK1P57059 783 aa30.56■■■□□ 2.48
GGA2-206ENST00000566547 ZNF784Q8NCA9 323 aaPredicted RBP30.56■■■□□ 2.48
GGA2-206ENST00000566547 LINC00116Q8NCU8 138 aa30.55■■■□□ 2.48
GGA2-206ENST00000566547 AEBP1Q8IUX7 1158 aa30.53■■■□□ 2.48
GGA2-206ENST00000566547 FLAD1Q8NFF5 587 aa30.53■■■□□ 2.48
GGA2-206ENST00000566547 ITPK1Q13572 414 aa30.52■■■□□ 2.48
GGA2-206ENST00000566547 ATG3Q9NT62 314 aa30.52■■■□□ 2.48
GGA2-206ENST00000566547 KNSTRNQ9Y448 316 aa30.52■■■□□ 2.48
GGA2-206ENST00000566547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.5■■■□□ 2.47
GGA2-206ENST00000566547 ATP6V1AP38606 617 aa30.49■■■□□ 2.47
GGA2-206ENST00000566547 KIF7Q2M1P5 1343 aa30.48■■■□□ 2.47
GGA2-206ENST00000566547 HMGB2P26583 209 aaKnown RBP30.48■■■□□ 2.47
GGA2-206ENST00000566547 PLEKHO1Q53GL0 409 aaPredicted RBP30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms