RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 PER1O15534 1290 aaPredicted RBP26.33■■□□□ 1.81
CCDC113-204ENST00000566498 CNGB1Q14028 1251 aaPredicted RBP26.33■■□□□ 1.81
CCDC113-204ENST00000566498 R3HDM1Q15032 1099 aaKnown RBP26.33■■□□□ 1.81
CCDC113-204ENST00000566498 NBPF14Q5TI25 921 aa26.33■■□□□ 1.81
CCDC113-204ENST00000566498 CC2D1BQ5T0F9 858 aaKnown RBP26.32■■□□□ 1.8
CCDC113-204ENST00000566498 EYA1Q99502 592 aa26.32■■□□□ 1.8
CCDC113-204ENST00000566498 MEGF6O75095 1541 aa26.32■■□□□ 1.8
CCDC113-204ENST00000566498 EIF4A2Q14240 407 aaKnown RBP26.31■■□□□ 1.8
CCDC113-204ENST00000566498 SYTL4Q96C24 671 aaPredicted RBP26.29■■□□□ 1.8
CCDC113-204ENST00000566498 PRIM1P49642 420 aaKnown RBP26.26■■□□□ 1.79
CCDC113-204ENST00000566498 TXNRD1Q16881 649 aa26.25■■□□□ 1.79
CCDC113-204ENST00000566498 PROM2Q8N271 834 aa26.25■■□□□ 1.79
CCDC113-204ENST00000566498 SPG7Q9UQ90 795 aa26.24■■□□□ 1.79
CCDC113-204ENST00000566498 PCDH11XQ9BZA7 1347 aa26.23■■□□□ 1.79
CCDC113-204ENST00000566498 PCDH11YQ9BZA8 1340 aa26.23■■□□□ 1.79
CCDC113-204ENST00000566498 NHSQ6T4R5 1651 aa26.22■■□□□ 1.79
CCDC113-204ENST00000566498 MTHFSP49914 203 aa26.22■■□□□ 1.79
CCDC113-204ENST00000566498 RREB1Q92766 1687 aa26.22■■□□□ 1.79
CCDC113-204ENST00000566498 NUP188Q5SRE5 1749 aa26.19■■□□□ 1.78
CCDC113-204ENST00000566498 CYP27B1O15528 508 aa26.19■■□□□ 1.78
CCDC113-204ENST00000566498 SHANK3Q9BYB0 1731 aa26.19■■□□□ 1.78
CCDC113-204ENST00000566498 RGPD3A6NKT7 1758 aaPredicted RBP26.18■■□□□ 1.78
CCDC113-204ENST00000566498 RGPD4Q7Z3J3 1758 aa26.18■■□□□ 1.78
CCDC113-204ENST00000566498 NCAPD2Q15021 1401 aa26.17■■□□□ 1.78
CCDC113-204ENST00000566498 BTAF1O14981 1849 aa26.17■■□□□ 1.78
CCDC113-204ENST00000566498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.17■■□□□ 1.78
CCDC113-204ENST00000566498 IGSF1Q8N6C5 1336 aa26.16■■□□□ 1.78
CCDC113-204ENST00000566498 NPC1L1Q9UHC9 1359 aa26.15■■□□□ 1.78
CCDC113-204ENST00000566498 SRCAPQ6ZRS2 3230 aa26.14■■□□□ 1.78
CCDC113-204ENST00000566498 IL13P35225 146 aa26.14■■□□□ 1.78
CCDC113-204ENST00000566498 STK32BQ9NY57 414 aa26.14■■□□□ 1.78
CCDC113-204ENST00000566498 SULT6B1Q6IMI4 303 aa26.13■■□□□ 1.77
CCDC113-204ENST00000566498 MPRIPQ6WCQ1 1025 aa26.13■■□□□ 1.77
CCDC113-204ENST00000566498 IFNL2Q8IZJ0 200 aa26.13■■□□□ 1.77
CCDC113-204ENST00000566498 DOT1LQ8TEK3 1739 aa26.13■■□□□ 1.77
CCDC113-204ENST00000566498 PLEKHO1Q53GL0 409 aaPredicted RBP26.12■■□□□ 1.77
CCDC113-204ENST00000566498 ANO8Q9HCE9 1232 aaPredicted RBP26.12■■□□□ 1.77
CCDC113-204ENST00000566498 AEBP1Q8IUX7 1158 aa26.11■■□□□ 1.77
CCDC113-204ENST00000566498 DIAPH1O60610 1272 aaKnown RBP26.1■■□□□ 1.77
CCDC113-204ENST00000566498 NKX1-1Q15270 411 aaPredicted RBP26.1■■□□□ 1.77
CCDC113-204ENST00000566498 PHKG2P15735 406 aa26.09■■□□□ 1.77
CCDC113-204ENST00000566498 SLC15A2Q16348 729 aa26.09■■□□□ 1.77
CCDC113-204ENST00000566498 LRRC4BQ9NT99 713 aa26.09■■□□□ 1.77
CCDC113-204ENST00000566498 PKD1L3Q7Z443 1732 aa26.08■■□□□ 1.77
CCDC113-204ENST00000566498 SLC27A3Q5K4L6 730 aa26.08■■□□□ 1.77
CCDC113-204ENST00000566498 KCNQ4P56696 695 aa26.07■■□□□ 1.76
CCDC113-204ENST00000566498 AMOTQ4VCS5 1084 aa26.07■■□□□ 1.76
CCDC113-204ENST00000566498 ZNF530Q6P9A1 599 aaPredicted RBP26.05■■□□□ 1.76
CCDC113-204ENST00000566498 HMOX1P09601 288 aa26.04■■□□□ 1.76
CCDC113-204ENST00000566498 CCNL1Q9UK58 526 aaPredicted RBP26.04■■□□□ 1.76
CCDC113-204ENST00000566498 HSP90AB1P08238 724 aaKnown RBP26.03■■□□□ 1.76
CCDC113-204ENST00000566498 C1orf141Q5JVX7 400 aa26.03■■□□□ 1.76
CCDC113-204ENST00000566498 PIGBQ92521 554 aa26.03■■□□□ 1.76
CCDC113-204ENST00000566498 TMOD3Q9NYL9 352 aa26.03■■□□□ 1.76
CCDC113-204ENST00000566498 PDGFDQ9GZP0 370 aaPredicted RBP26.02■■□□□ 1.76
CCDC113-204ENST00000566498 SPON1Q9HCB6 807 aa26.02■■□□□ 1.76
CCDC113-204ENST00000566498 U2SURPO15042 1029 aaKnown RBP26.01■■□□□ 1.75
CCDC113-204ENST00000566498 SMARCC1Q92922 1105 aaPredicted RBP26.01■■□□□ 1.75
CCDC113-204ENST00000566498 CFAP53Q96M91 514 aa26.01■■□□□ 1.75
CCDC113-204ENST00000566498 PLEKHG2Q9H7P9 1386 aa26.01■■□□□ 1.75
CCDC113-204ENST00000566498 ITGB4P16144 1822 aa26■■□□□ 1.75
CCDC113-204ENST00000566498 KDRP35968 1356 aa25.99■■□□□ 1.75
CCDC113-204ENST00000566498 DCAF5Q96JK2 942 aa25.99■■□□□ 1.75
CCDC113-204ENST00000566498 ZBTB7AO95365 584 aa25.98■■□□□ 1.75
CCDC113-204ENST00000566498 PPP2R1AP30153 589 aa25.98■■□□□ 1.75
CCDC113-204ENST00000566498 ZNF827Q17R98 1081 aa25.98■■□□□ 1.75
CCDC113-204ENST00000566498 TFCP2L1Q9NZI6 479 aa25.98■■□□□ 1.75
CCDC113-204ENST00000566498 LRP5O75197 1615 aa25.98■■□□□ 1.75
CCDC113-204ENST00000566498 PALLDQ8WX93 1383 aa25.97■■□□□ 1.75
CCDC113-204ENST00000566498 ERVV-2B6SEH9 535 aa25.97■■□□□ 1.75
CCDC113-204ENST00000566498 ZEB1P37275 1124 aaPredicted RBP25.97■■□□□ 1.75
CCDC113-204ENST00000566498 TOGARAM1Q9Y4F4 1720 aa25.97■■□□□ 1.75
CCDC113-204ENST00000566498 HMGB2P26583 209 aaKnown RBP25.96■■□□□ 1.75
CCDC113-204ENST00000566498 CABP4P57796 275 aa25.96■■□□□ 1.75
CCDC113-204ENST00000566498 DDX10Q13206 875 aaKnown RBP25.96■■□□□ 1.75
CCDC113-204ENST00000566498 AKT1S1Q96B36 256 aa25.96■■□□□ 1.75
CCDC113-204ENST00000566498 PPP1R1BQ9UD71 204 aaPredicted RBP25.96■■□□□ 1.75
CCDC113-204ENST00000566498 ATF5Q9Y2D1 282 aaPredicted RBP25.96■■□□□ 1.75
CCDC113-204ENST00000566498 LY75O60449 1722 aa25.96■■□□□ 1.75
CCDC113-204ENST00000566498 ASAP1Q9ULH1 1129 aa25.95■■□□□ 1.74
CCDC113-204ENST00000566498 NUDCQ9Y266 331 aa25.93■■□□□ 1.74
CCDC113-204ENST00000566498 AKAP4Q5JQC9 854 aa25.92■■□□□ 1.74
CCDC113-204ENST00000566498 ATG3Q9NT62 314 aa25.91■■□□□ 1.74
CCDC113-204ENST00000566498 PAPPAQ13219 1627 aa25.91■■□□□ 1.74
CCDC113-204ENST00000566498 LOC102724428A0A0B4J2F2 783 aa25.89■■□□□ 1.74
CCDC113-204ENST00000566498 MSH5O43196 834 aa25.89■■□□□ 1.74
CCDC113-204ENST00000566498 SIK1P57059 783 aa25.89■■□□□ 1.74
CCDC113-204ENST00000566498 MTHFSDQ2M296 383 aaKnown RBP25.89■■□□□ 1.74
CCDC113-204ENST00000566498 NFATC2IPQ8NCF5 419 aa25.89■■□□□ 1.74
CCDC113-204ENST00000566498 MTFR1LQ9H019 292 aa25.89■■□□□ 1.74
CCDC113-204ENST00000566498 COL3A1P02461 1466 aaPredicted RBP25.89■■□□□ 1.73
CCDC113-204ENST00000566498 CASZ1Q86V15 1759 aa25.89■■□□□ 1.73
CCDC113-204ENST00000566498 ATP6V1AP38606 617 aa25.87■■□□□ 1.73
CCDC113-204ENST00000566498 RBM42Q9BTD8 480 aaKnown RBP25.87■■□□□ 1.73
CCDC113-204ENST00000566498 KDM6AO15550 1401 aaPredicted RBP25.87■■□□□ 1.73
CCDC113-204ENST00000566498 U2AF1L5P0DN76 240 aaPredicted RBP25.86■■□□□ 1.73
CCDC113-204ENST00000566498 U2AF1Q01081 240 aaKnown RBP eCLIP25.86■■□□□ 1.73
CCDC113-204ENST00000566498 LGR6Q9HBX8 967 aa25.86■■□□□ 1.73
CCDC113-204ENST00000566498 PNPLA7Q6ZV29 1317 aa25.86■■□□□ 1.73
CCDC113-204ENST00000566498 SLC16A10Q8TF71 515 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms