RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SMG6Q86US8 1419 aaKnown RBP25.44■■□□□ 1.66
USB1-213ENST00000566292 KIF24Q5T7B8 1368 aa25.44■■□□□ 1.66
USB1-213ENST00000566292 SLC15A2Q16348 729 aa25.43■■□□□ 1.66
USB1-213ENST00000566292 ZCRB1Q8TBF4 217 aaKnown RBP25.43■■□□□ 1.66
USB1-213ENST00000566292 STK32BQ9NY57 414 aa25.43■■□□□ 1.66
USB1-213ENST00000566292 EMILIN1Q9Y6C2 1016 aa25.41■■□□□ 1.66
USB1-213ENST00000566292 HSPA5P11021 654 aaKnown RBP25.4■■□□□ 1.66
USB1-213ENST00000566292 POLR3GLQ9BT43 218 aa25.4■■□□□ 1.66
USB1-213ENST00000566292 EIF4G2P78344 907 aaKnown RBP eCLIP25.39■■□□□ 1.66
USB1-213ENST00000566292 LY75O60449 1722 aa25.38■■□□□ 1.65
USB1-213ENST00000566292 LRRC4BQ9NT99 713 aa25.38■■□□□ 1.65
USB1-213ENST00000566292 NSD2O96028 1365 aa25.38■■□□□ 1.65
USB1-213ENST00000566292 CGNL1Q0VF96 1302 aa25.37■■□□□ 1.65
USB1-213ENST00000566292 ZBTB7AO95365 584 aa25.37■■□□□ 1.65
USB1-213ENST00000566292 PRIM1P49642 420 aaKnown RBP25.37■■□□□ 1.65
USB1-213ENST00000566292 PPP1R1BQ9UD71 204 aaPredicted RBP25.37■■□□□ 1.65
USB1-213ENST00000566292 RAPGEF4Q8WZA2 1011 aa25.36■■□□□ 1.65
USB1-213ENST00000566292 SYTL4Q96C24 671 aaPredicted RBP25.35■■□□□ 1.65
USB1-213ENST00000566292 TATP17735 454 aaPredicted RBP25.34■■□□□ 1.65
USB1-213ENST00000566292 ZNF827Q17R98 1081 aa25.34■■□□□ 1.65
USB1-213ENST00000566292 QSER1Q2KHR3 1735 aa25.34■■□□□ 1.65
USB1-213ENST00000566292 PKD1L3Q7Z443 1732 aa25.34■■□□□ 1.65
USB1-213ENST00000566292 TUBGCP6Q96RT7 1819 aa25.33■■□□□ 1.65
USB1-213ENST00000566292 PTGER2P43116 358 aa25.33■■□□□ 1.65
USB1-213ENST00000566292 ATF5Q9Y2D1 282 aaPredicted RBP25.33■■□□□ 1.65
USB1-213ENST00000566292 NCAPD2Q15021 1401 aa25.32■■□□□ 1.64
USB1-213ENST00000566292 PPM1GO15355 546 aaPredicted RBP25.32■■□□□ 1.64
USB1-213ENST00000566292 SLC27A3Q5K4L6 730 aa25.31■■□□□ 1.64
USB1-213ENST00000566292 WASHC2AQ641Q2 1341 aa25.3■■□□□ 1.64
USB1-213ENST00000566292 TOGARAM1Q9Y4F4 1720 aa25.29■■□□□ 1.64
USB1-213ENST00000566292 KCNQ4P56696 695 aa25.29■■□□□ 1.64
USB1-213ENST00000566292 AKT1S1Q96B36 256 aa25.29■■□□□ 1.64
USB1-213ENST00000566292 POLKQ9UBT6 870 aa25.29■■□□□ 1.64
USB1-213ENST00000566292 PCDH11XQ9BZA7 1347 aa25.29■■□□□ 1.64
USB1-213ENST00000566292 PCDH11YQ9BZA8 1340 aa25.29■■□□□ 1.64
USB1-213ENST00000566292 ITGB4P16144 1822 aa25.28■■□□□ 1.64
USB1-213ENST00000566292 MTFR1LQ9H019 292 aa25.28■■□□□ 1.64
USB1-213ENST00000566292 PANK3Q9H999 370 aa25.28■■□□□ 1.64
USB1-213ENST00000566292 CYP27B1O15528 508 aa25.26■■□□□ 1.63
USB1-213ENST00000566292 SGIP1Q9BQI5 828 aa25.26■■□□□ 1.63
USB1-213ENST00000566292 TNNT2P45379 298 aaPredicted RBP25.25■■□□□ 1.63
USB1-213ENST00000566292 EYA1Q99502 592 aa25.25■■□□□ 1.63
USB1-213ENST00000566292 COL24A1Q17RW2 1714 aa25.23■■□□□ 1.63
USB1-213ENST00000566292 TAF1LQ8IZX4 1826 aa25.21■■□□□ 1.63
USB1-213ENST00000566292 PNPLA7Q6ZV29 1317 aa25.21■■□□□ 1.63
USB1-213ENST00000566292 C5P01031 1676 aa25.21■■□□□ 1.63
USB1-213ENST00000566292 CCNL1Q9UK58 526 aaPredicted RBP25.21■■□□□ 1.63
USB1-213ENST00000566292 EIF4A2Q14240 407 aaKnown RBP25.2■■□□□ 1.62
USB1-213ENST00000566292 MPRIPQ6WCQ1 1025 aa25.18■■□□□ 1.62
USB1-213ENST00000566292 FHDC1Q9C0D6 1143 aaPredicted RBP25.18■■□□□ 1.62
USB1-213ENST00000566292 TFCP2L1Q9NZI6 479 aa25.17■■□□□ 1.62
USB1-213ENST00000566292 SPG7Q9UQ90 795 aa25.17■■□□□ 1.62
USB1-213ENST00000566292 NKX1-1Q15270 411 aaPredicted RBP25.16■■□□□ 1.62
USB1-213ENST00000566292 SLC16A10Q8TF71 515 aa25.16■■□□□ 1.62
USB1-213ENST00000566292 SYT17Q9BSW7 474 aa25.16■■□□□ 1.62
USB1-213ENST00000566292 ARXQ96QS3 562 aa25.15■■□□□ 1.62
USB1-213ENST00000566292 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.15■■□□□ 1.62
USB1-213ENST00000566292 PALLDQ8WX93 1383 aa25.15■■□□□ 1.62
USB1-213ENST00000566292 IGSF1Q8N6C5 1336 aa25.13■■□□□ 1.61
USB1-213ENST00000566292 DCAF8L1A6NGE4 600 aa25.12■■□□□ 1.61
USB1-213ENST00000566292 MORC1Q86VD1 984 aa25.12■■□□□ 1.61
USB1-213ENST00000566292 PIGBQ92521 554 aa25.12■■□□□ 1.61
USB1-213ENST00000566292 KIF7Q2M1P5 1343 aa25.12■■□□□ 1.61
USB1-213ENST00000566292 C4BP0C0L5 1744 aa25.1■■□□□ 1.61
USB1-213ENST00000566292 PHKG2P15735 406 aa25.1■■□□□ 1.61
USB1-213ENST00000566292 KNSTRNQ9Y448 316 aa25.1■■□□□ 1.61
USB1-213ENST00000566292 MAP3K5Q99683 1374 aa25.09■■□□□ 1.61
USB1-213ENST00000566292 PLEKHG2Q9H7P9 1386 aa25.09■■□□□ 1.61
USB1-213ENST00000566292 YY1P25490 414 aa25.09■■□□□ 1.61
USB1-213ENST00000566292 COL23A1Q86Y22 540 aaPredicted RBP25.09■■□□□ 1.61
USB1-213ENST00000566292 IFNL2Q8IZJ0 200 aa25.09■■□□□ 1.61
USB1-213ENST00000566292 SMARCC1Q92922 1105 aaPredicted RBP25.08■■□□□ 1.61
USB1-213ENST00000566292 AMER1Q5JTC6 1135 aaPredicted RBP25.07■■□□□ 1.6
USB1-213ENST00000566292 UBR3Q6ZT12 1888 aa25.06■■□□□ 1.6
USB1-213ENST00000566292 POLD1P28340 1107 aa25.06■■□□□ 1.6
USB1-213ENST00000566292 TMOD3Q9NYL9 352 aa25.05■■□□□ 1.6
USB1-213ENST00000566292 MSH5O43196 834 aa25.04■■□□□ 1.6
USB1-213ENST00000566292 UTRNP46939 3433 aa25.02■■□□□ 1.6
USB1-213ENST00000566292 AEBP1Q8IUX7 1158 aa25.02■■□□□ 1.6
USB1-213ENST00000566292 ASAP1Q9ULH1 1129 aa25.02■■□□□ 1.6
USB1-213ENST00000566292 CHD4Q14839 1912 aa25.02■■□□□ 1.6
USB1-213ENST00000566292 LOC102724428A0A0B4J2F2 783 aa25.01■■□□□ 1.59
USB1-213ENST00000566292 HMGB2P26583 209 aaKnown RBP25.01■■□□□ 1.59
USB1-213ENST00000566292 SIK1P57059 783 aa25.01■■□□□ 1.59
USB1-213ENST00000566292 AMIGO3Q86WK7 504 aa25.01■■□□□ 1.59
USB1-213ENST00000566292 PER1O15534 1290 aaPredicted RBP25■■□□□ 1.59
USB1-213ENST00000566292 KLHL34Q8N239 644 aa25■■□□□ 1.59
USB1-213ENST00000566292 IL13P35225 146 aa24.99■■□□□ 1.59
USB1-213ENST00000566292 PLEKHO1Q53GL0 409 aaPredicted RBP24.99■■□□□ 1.59
USB1-213ENST00000566292 MSL1Q68DK7 614 aa24.99■■□□□ 1.59
USB1-213ENST00000566292 KDM6AO15550 1401 aaPredicted RBP24.98■■□□□ 1.59
USB1-213ENST00000566292 LINC00116Q8NCU8 138 aa24.98■■□□□ 1.59
USB1-213ENST00000566292 AK7Q96M32 723 aa24.98■■□□□ 1.59
USB1-213ENST00000566292 ATG3Q9NT62 314 aa24.98■■□□□ 1.59
USB1-213ENST00000566292 KDRP35968 1356 aa24.97■■□□□ 1.59
USB1-213ENST00000566292 ITPK1Q13572 414 aa24.97■■□□□ 1.59
USB1-213ENST00000566292 ZNF530Q6P9A1 599 aaPredicted RBP24.97■■□□□ 1.59
USB1-213ENST00000566292 SMIM5Q71RC9 77 aa24.97■■□□□ 1.59
USB1-213ENST00000566292 FLAD1Q8NFF5 587 aa24.97■■□□□ 1.59
USB1-213ENST00000566292 ERVV-2B6SEH9 535 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms