RNA–Protein interactions for RNA: ENST00000566055.5

SIRPB1-212, Transcript of signal regulatory protein beta 1, humanhuman

TSL 3

Gene SIRPB1, Length 928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-212ENST00000566055 ACEP12821 1306 aa16.47■□□□□ 0.23
SIRPB1-212ENST00000566055 TOPAZ1Q8N9V7 1692 aa16.47■□□□□ 0.23
SIRPB1-212ENST00000566055 CAMTA1Q9Y6Y1 1673 aa16.47■□□□□ 0.23
SIRPB1-212ENST00000566055 ABTB2Q8N961 1025 aa16.47■□□□□ 0.23
SIRPB1-212ENST00000566055 RUNDC1Q96C34 613 aa16.47■□□□□ 0.23
SIRPB1-212ENST00000566055 PDGFDQ9GZP0 370 aaPredicted RBP16.47■□□□□ 0.23
SIRPB1-212ENST00000566055 PNNQ9H307 717 aaKnown RBP16.47■□□□□ 0.23
SIRPB1-212ENST00000566055 NUP188Q5SRE5 1749 aa16.47■□□□□ 0.23
SIRPB1-212ENST00000566055 RNF123Q5XPI4 1314 aa16.46■□□□□ 0.23
SIRPB1-212ENST00000566055 GOLGA2Q08379 1002 aa16.46■□□□□ 0.23
SIRPB1-212ENST00000566055 PTF1AQ7RTS3 328 aa16.46■□□□□ 0.23
SIRPB1-212ENST00000566055 RCAN3Q9UKA8 241 aa16.46■□□□□ 0.23
SIRPB1-212ENST00000566055 RREB1Q92766 1687 aa16.46■□□□□ 0.23
SIRPB1-212ENST00000566055 AKAP12Q02952 1782 aa16.46■□□□□ 0.22
SIRPB1-212ENST00000566055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.45■□□□□ 0.22
SIRPB1-212ENST00000566055 CCDC146Q8IYE0 955 aa16.45■□□□□ 0.22
SIRPB1-212ENST00000566055 ANO8Q9HCE9 1232 aaPredicted RBP16.45■□□□□ 0.22
SIRPB1-212ENST00000566055 PPP4R2Q9NY27 417 aa16.45■□□□□ 0.22
SIRPB1-212ENST00000566055 SENP3-EIF4A1A0A087X0R7 540 aa16.44■□□□□ 0.22
SIRPB1-212ENST00000566055 COG3Q96JB2 828 aa16.44■□□□□ 0.22
SIRPB1-212ENST00000566055 PHRF1Q9P1Y6 1649 aaKnown RBP16.44■□□□□ 0.22
SIRPB1-212ENST00000566055 PLEKHG3A1L390 1219 aa16.43■□□□□ 0.22
SIRPB1-212ENST00000566055 ZBTB7CA1YPR0 619 aa16.43■□□□□ 0.22
SIRPB1-212ENST00000566055 APAF1O14727 1248 aa16.43■□□□□ 0.22
SIRPB1-212ENST00000566055 GCP02774 474 aa16.43■□□□□ 0.22
SIRPB1-212ENST00000566055 THRAP3Q9Y2W1 955 aaKnown RBP16.43■□□□□ 0.22
SIRPB1-212ENST00000566055 ZNF521Q96K83 1311 aa16.43■□□□□ 0.22
SIRPB1-212ENST00000566055 IRX6P78412 446 aaPredicted RBP16.42■□□□□ 0.22
SIRPB1-212ENST00000566055 CPDO75976 1380 aa16.41■□□□□ 0.22
SIRPB1-212ENST00000566055 AATKQ6ZMQ8 1374 aa16.41■□□□□ 0.22
SIRPB1-212ENST00000566055 E9PSI1 815 aa16.41■□□□□ 0.22
SIRPB1-212ENST00000566055 PLSCR1O15162 318 aa16.41■□□□□ 0.22
SIRPB1-212ENST00000566055 ZBTB7AO95365 584 aa16.41■□□□□ 0.22
SIRPB1-212ENST00000566055 U2AF1L5P0DN76 240 aaPredicted RBP16.41■□□□□ 0.22
SIRPB1-212ENST00000566055 U2AF1Q01081 240 aaKnown RBP eCLIP16.41■□□□□ 0.22
SIRPB1-212ENST00000566055 COL3A1P02461 1466 aaPredicted RBP16.41■□□□□ 0.22
SIRPB1-212ENST00000566055 UTRNP46939 3433 aa16.41■□□□□ 0.22
SIRPB1-212ENST00000566055 DIAPH1O60610 1272 aaKnown RBP16.4■□□□□ 0.22
SIRPB1-212ENST00000566055 RRP1P56182 461 aaKnown RBP16.4■□□□□ 0.22
SIRPB1-212ENST00000566055 ZNF784Q8NCA9 323 aaPredicted RBP16.4■□□□□ 0.22
SIRPB1-212ENST00000566055 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
SIRPB1-212ENST00000566055 USP19O94966 1318 aa16.4■□□□□ 0.22
SIRPB1-212ENST00000566055 NRKQ7Z2Y5 1582 aa16.39■□□□□ 0.21
SIRPB1-212ENST00000566055 USP6P35125 1406 aa16.39■□□□□ 0.21
SIRPB1-212ENST00000566055 NEFMP07197 916 aa16.39■□□□□ 0.21
SIRPB1-212ENST00000566055 CDCA7LQ96GN5 454 aa16.39■□□□□ 0.21
SIRPB1-212ENST00000566055 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
SIRPB1-212ENST00000566055 TTC21AQ8NDW8 1320 aa16.39■□□□□ 0.21
SIRPB1-212ENST00000566055 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
SIRPB1-212ENST00000566055 U2SURPO15042 1029 aaKnown RBP16.38■□□□□ 0.21
SIRPB1-212ENST00000566055 PTGER2P43116 358 aa16.38■□□□□ 0.21
SIRPB1-212ENST00000566055 CCDC27Q2M243 656 aa16.38■□□□□ 0.21
SIRPB1-212ENST00000566055 LMO7Q8WWI1 1683 aa16.37■□□□□ 0.21
SIRPB1-212ENST00000566055 COL5A2P05997 1499 aaPredicted RBP16.37■□□□□ 0.21
SIRPB1-212ENST00000566055 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
SIRPB1-212ENST00000566055 DDB1Q16531 1140 aa16.37■□□□□ 0.21
SIRPB1-212ENST00000566055 NME9Q86XW9 330 aa16.37■□□□□ 0.21
SIRPB1-212ENST00000566055 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.37■□□□□ 0.21
SIRPB1-212ENST00000566055 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
SIRPB1-212ENST00000566055 TTC21BQ7Z4L5 1316 aa16.37■□□□□ 0.21
SIRPB1-212ENST00000566055 OVOS2A0A0G2JMS6 1433 aa16.36■□□□□ 0.21
SIRPB1-212ENST00000566055 OVOS2A0A0J9YW53 1432 aa16.36■□□□□ 0.21
SIRPB1-212ENST00000566055 OVOS2Q6IE36 1432 aa16.36■□□□□ 0.21
SIRPB1-212ENST00000566055 MARCH10Q8NA82 808 aaPredicted RBP16.36■□□□□ 0.21
SIRPB1-212ENST00000566055 CRB1P82279 1406 aa16.36■□□□□ 0.21
SIRPB1-212ENST00000566055 DUSP27Q5VZP5 1158 aa16.35■□□□□ 0.21
SIRPB1-212ENST00000566055 TOM1L2Q6ZVM7 507 aa16.35■□□□□ 0.21
SIRPB1-212ENST00000566055 WDR63Q8IWG1 891 aa16.35■□□□□ 0.21
SIRPB1-212ENST00000566055 NLRP6P59044 892 aa16.34■□□□□ 0.21
SIRPB1-212ENST00000566055 FHDC1Q9C0D6 1143 aaPredicted RBP16.34■□□□□ 0.21
SIRPB1-212ENST00000566055 POLKQ9UBT6 870 aa16.34■□□□□ 0.21
SIRPB1-212ENST00000566055 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
SIRPB1-212ENST00000566055 PARP4Q9UKK3 1724 aaKnown RBP16.33■□□□□ 0.21
SIRPB1-212ENST00000566055 WWC1Q8IX03 1113 aa16.33■□□□□ 0.2
SIRPB1-212ENST00000566055 AKT1S1Q96B36 256 aa16.33■□□□□ 0.2
SIRPB1-212ENST00000566055 SYT17Q9BSW7 474 aa16.33■□□□□ 0.2
SIRPB1-212ENST00000566055 PEAK1Q9H792 1746 aa16.33■□□□□ 0.2
SIRPB1-212ENST00000566055 PPM1GO15355 546 aaPredicted RBP16.32■□□□□ 0.2
SIRPB1-212ENST00000566055 ECM2O94769 699 aaPredicted RBP16.32■□□□□ 0.2
SIRPB1-212ENST00000566055 FCHSD2O94868 740 aa16.32■□□□□ 0.2
SIRPB1-212ENST00000566055 TRMT2AQ8IZ69 625 aaKnown RBP16.32■□□□□ 0.2
SIRPB1-212ENST00000566055 PLCB2Q00722 1185 aa16.31■□□□□ 0.2
SIRPB1-212ENST00000566055 TXNRD1Q16881 649 aa16.31■□□□□ 0.2
SIRPB1-212ENST00000566055 MYH16Q9H6N6 1097 aa16.31■□□□□ 0.2
SIRPB1-212ENST00000566055 STK32BQ9NY57 414 aa16.31■□□□□ 0.2
SIRPB1-212ENST00000566055 SLC15A2Q16348 729 aa16.3■□□□□ 0.2
SIRPB1-212ENST00000566055 SBF2Q86WG5 1849 aa16.3■□□□□ 0.2
SIRPB1-212ENST00000566055 CASZ1Q86V15 1759 aa16.3■□□□□ 0.2
SIRPB1-212ENST00000566055 USP31Q70CQ4 1352 aa16.29■□□□□ 0.2
SIRPB1-212ENST00000566055 NEUROD2Q15784 382 aa16.29■□□□□ 0.2
SIRPB1-212ENST00000566055 C1QTNF8P60827 252 aa16.28■□□□□ 0.2
SIRPB1-212ENST00000566055 CCDC136Q96JN2 1154 aa16.28■□□□□ 0.2
SIRPB1-212ENST00000566055 PLEKHF1Q96S99 279 aa16.28■□□□□ 0.2
SIRPB1-212ENST00000566055 LRRC37A3O60309 1634 aa16.27■□□□□ 0.2
SIRPB1-212ENST00000566055 WDR17Q8IZU2 1322 aa16.27■□□□□ 0.2
SIRPB1-212ENST00000566055 SOX12O15370 315 aa16.27■□□□□ 0.2
SIRPB1-212ENST00000566055 SPDYE1Q8NFV5 336 aaPredicted RBP16.27■□□□□ 0.2
SIRPB1-212ENST00000566055 SGIP1Q9BQI5 828 aa16.27■□□□□ 0.2
SIRPB1-212ENST00000566055 RRP7AQ9Y3A4 280 aaKnown RBP16.27■□□□□ 0.2
SIRPB1-212ENST00000566055 EMILIN1Q9Y6C2 1016 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms