RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 KIAA0586Q9BVV6 1533 aa16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 PDE3AQ14432 1141 aa16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 CCDC85AQ96PX6 553 aaPredicted RBP16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 PLCD4Q9BRC7 762 aa16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 WDR33Q9C0J8 1336 aaKnown RBP16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 SRGAP3O43295 1099 aa16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 CEP126Q9P2H0 1117 aa16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 BLOC1S2Q6QNY1 142 aa16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 PRDM11Q9NQV5 511 aa16.06■□□□□ 0.16
CX3CL1-204ENST00000565912 NBPF1Q3BBV0 1214 aa16.05■□□□□ 0.16
CX3CL1-204ENST00000565912 LEKR1Q6ZMV7 388 aa16.05■□□□□ 0.16
CX3CL1-204ENST00000565912 CDK13Q14004 1512 aaKnown RBP16.05■□□□□ 0.16
CX3CL1-204ENST00000565912 ENOX2Q16206 610 aaKnown RBP16.05■□□□□ 0.16
CX3CL1-204ENST00000565912 ANKRD18AQ8IVF6 992 aa16.05■□□□□ 0.16
CX3CL1-204ENST00000565912 BTBD11A6QL63 1104 aa16.05■□□□□ 0.16
CX3CL1-204ENST00000565912 LRP2BPQ9P2M1 347 aa16.05■□□□□ 0.16
CX3CL1-204ENST00000565912 CDKL5O76039 1030 aa16.04■□□□□ 0.16
CX3CL1-204ENST00000565912 USP5P45974 858 aa16.04■□□□□ 0.16
CX3CL1-204ENST00000565912 CWC27Q6UX04 472 aaKnown RBP16.04■□□□□ 0.16
CX3CL1-204ENST00000565912 PDRG1Q9NUG6 133 aa16.04■□□□□ 0.16
CX3CL1-204ENST00000565912 PIP4K2BP78356 416 aa16.04■□□□□ 0.16
CX3CL1-204ENST00000565912 CENPHQ9H3R5 247 aa16.04■□□□□ 0.16
CX3CL1-204ENST00000565912 MTERF4Q7Z6M4 381 aaKnown RBP16.04■□□□□ 0.16
CX3CL1-204ENST00000565912 TAX1BP1Q86VP1 789 aa16.04■□□□□ 0.16
CX3CL1-204ENST00000565912 TXLNBQ8N3L3 684 aa16.04■□□□□ 0.16
CX3CL1-204ENST00000565912 JAKMIP1Q96N16 626 aaKnown RBP16.03■□□□□ 0.16
CX3CL1-204ENST00000565912 IL1RAPL2Q9NP60 686 aa16.03■□□□□ 0.16
CX3CL1-204ENST00000565912 SPATA32Q96LK8 384 aa16.03■□□□□ 0.16
CX3CL1-204ENST00000565912 CTNNA3Q9UI47 895 aa16.03■□□□□ 0.16
CX3CL1-204ENST00000565912 HFM1A2PYH4 1435 aa16.03■□□□□ 0.16
CX3CL1-204ENST00000565912 K7ELQ4 463 aaPredicted RBP16.03■□□□□ 0.16
CX3CL1-204ENST00000565912 DAPK1P53355 1430 aa16.03■□□□□ 0.16
CX3CL1-204ENST00000565912 KIAA1107Q9UPP5 1409 aa16.03■□□□□ 0.16
CX3CL1-204ENST00000565912 IDH1O75874 414 aaKnown RBP16.02■□□□□ 0.16
CX3CL1-204ENST00000565912 XPCQ01831 940 aaPredicted RBP16.02■□□□□ 0.16
CX3CL1-204ENST00000565912 CBFA2T2O43439 604 aa16.02■□□□□ 0.16
CX3CL1-204ENST00000565912 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.15
CX3CL1-204ENST00000565912 NEBLO76041 1014 aa16.02■□□□□ 0.15
CX3CL1-204ENST00000565912 RRS1Q15050 365 aaKnown RBP16.02■□□□□ 0.15
CX3CL1-204ENST00000565912 IGHMBP2P38935 993 aaKnown RBP16.02■□□□□ 0.15
CX3CL1-204ENST00000565912 ATF7IPQ6VMQ6 1270 aa16.02■□□□□ 0.15
CX3CL1-204ENST00000565912 IQGAP2Q13576 1575 aa16.01■□□□□ 0.15
CX3CL1-204ENST00000565912 HMGN5P82970 282 aaKnown RBP16.01■□□□□ 0.15
CX3CL1-204ENST00000565912 SLC26A8Q96RN1 970 aa16.01■□□□□ 0.15
CX3CL1-204ENST00000565912 EPRSP07814 1512 aaKnown RBP16.01■□□□□ 0.15
CX3CL1-204ENST00000565912 DHX8Q14562 1220 aaKnown RBP16.01■□□□□ 0.15
CX3CL1-204ENST00000565912 RBM10P98175 930 aaKnown RBP16■□□□□ 0.15
CX3CL1-204ENST00000565912 CHD1LQ86WJ1 897 aa16■□□□□ 0.15
CX3CL1-204ENST00000565912 ABCF2Q9UG63 623 aa16■□□□□ 0.15
CX3CL1-204ENST00000565912 SSR1P43307 286 aaKnown RBP16■□□□□ 0.15
CX3CL1-204ENST00000565912 CEP57L1Q8IYX8 460 aa16■□□□□ 0.15
CX3CL1-204ENST00000565912 CCDC112Q8NEF3 446 aa16■□□□□ 0.15
CX3CL1-204ENST00000565912 RTEL1-TNFRSF6BF6WH68 1400 aa15.99■□□□□ 0.15
CX3CL1-204ENST00000565912 CCDC66A2RUB6 948 aa15.99■□□□□ 0.15
CX3CL1-204ENST00000565912 FAM193AP78312 1265 aa15.99■□□□□ 0.15
CX3CL1-204ENST00000565912 AIDAQ96BJ3 306 aa15.99■□□□□ 0.15
CX3CL1-204ENST00000565912 MVPQ14764 893 aaKnown RBP15.99■□□□□ 0.15
CX3CL1-204ENST00000565912 TMOD2Q9NZR1 351 aa15.99■□□□□ 0.15
CX3CL1-204ENST00000565912 CFAP45Q9UL16 551 aa15.99■□□□□ 0.15
CX3CL1-204ENST00000565912 LRRFIP2Q9Y608 721 aaKnown RBP15.99■□□□□ 0.15
CX3CL1-204ENST00000565912 DESP17661 470 aa15.98■□□□□ 0.15
CX3CL1-204ENST00000565912 ZC3H6P61129 1189 aaKnown RBP15.98■□□□□ 0.15
CX3CL1-204ENST00000565912 WDR63Q8IWG1 891 aa15.98■□□□□ 0.15
CX3CL1-204ENST00000565912 ZSCAN31Q96LW9 406 aaPredicted RBP15.98■□□□□ 0.15
CX3CL1-204ENST00000565912 EIF5P55010 431 aaKnown RBP15.98■□□□□ 0.15
CX3CL1-204ENST00000565912 DDX11Q96FC9 970 aa15.98■□□□□ 0.15
CX3CL1-204ENST00000565912 ERLIN1O75477 346 aa15.98■□□□□ 0.15
CX3CL1-204ENST00000565912 DHX37Q8IY37 1157 aaKnown RBP15.98■□□□□ 0.15
CX3CL1-204ENST00000565912 KIAA0754O94854 1291 aa15.97■□□□□ 0.15
CX3CL1-204ENST00000565912 ANKLE2Q86XL3 938 aa15.97■□□□□ 0.15
CX3CL1-204ENST00000565912 NUTM1Q86Y26 1132 aa15.97■□□□□ 0.15
CX3CL1-204ENST00000565912 WASF1Q92558 559 aa15.97■□□□□ 0.15
CX3CL1-204ENST00000565912 KRT32Q14532 448 aa15.97■□□□□ 0.15
CX3CL1-204ENST00000565912 UPF3BQ9BZI7 483 aaKnown RBP15.97■□□□□ 0.15
CX3CL1-204ENST00000565912 IMMTQ16891 758 aaKnown RBP15.97■□□□□ 0.15
CX3CL1-204ENST00000565912 NBPF8Q3BBV2 869 aa15.97■□□□□ 0.15
CX3CL1-204ENST00000565912 NUP62CLQ9H1M0 184 aa15.97■□□□□ 0.15
CX3CL1-204ENST00000565912 EZRP15311 586 aaKnown RBP15.96■□□□□ 0.15
CX3CL1-204ENST00000565912 CHMP4BP1P59074 171 aa15.96■□□□□ 0.15
CX3CL1-204ENST00000565912 HSP90AB3PQ58FF7 597 aa15.96■□□□□ 0.15
CX3CL1-204ENST00000565912 METTL24Q5JXM2 366 aa15.96■□□□□ 0.15
CX3CL1-204ENST00000565912 FILIP1Q7Z7B0 1213 aa15.96■□□□□ 0.15
CX3CL1-204ENST00000565912 ARHGEF11O15085 1522 aa15.96■□□□□ 0.15
CX3CL1-204ENST00000565912 SLC52A1Q9NWF4 448 aa15.96■□□□□ 0.15
CX3CL1-204ENST00000565912 BRPF3Q9ULD4 1205 aa15.96■□□□□ 0.15
CX3CL1-204ENST00000565912 PPP6R1Q9UPN7 881 aa15.96■□□□□ 0.15
CX3CL1-204ENST00000565912 CCDC97Q96F63 343 aaPredicted RBP15.96■□□□□ 0.14
CX3CL1-204ENST00000565912 STARD3NLO95772 234 aa15.95■□□□□ 0.14
CX3CL1-204ENST00000565912 KIAA1328Q86T90 577 aa15.95■□□□□ 0.14
CX3CL1-204ENST00000565912 TAF4BQ92750 862 aa15.95■□□□□ 0.14
CX3CL1-204ENST00000565912 GOLGA6L7A0A1B0GV03 622 aa15.95■□□□□ 0.14
CX3CL1-204ENST00000565912 CUL7Q14999 1698 aa15.95■□□□□ 0.14
CX3CL1-204ENST00000565912 GBP2P32456 591 aaPredicted RBP15.94■□□□□ 0.14
CX3CL1-204ENST00000565912 MIS18AQ9NYP9 233 aa15.94■□□□□ 0.14
CX3CL1-204ENST00000565912 CASTP20810 708 aaKnown RBP15.94■□□□□ 0.14
CX3CL1-204ENST00000565912 POLR3DP05423 398 aaPredicted RBP15.94■□□□□ 0.14
CX3CL1-204ENST00000565912 EPB41L2O43491 1005 aaKnown RBP15.94■□□□□ 0.14
CX3CL1-204ENST00000565912 EIF3JO75822 258 aaKnown RBP15.94■□□□□ 0.14
CX3CL1-204ENST00000565912 IQCEQ6IPM2 695 aa15.94■□□□□ 0.14
CX3CL1-204ENST00000565912 PTCD1O75127 700 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms