RNA–Protein interactions for RNA: ENST00000565908.6

TCF4-230, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-230ENST00000565908 R3HDM1Q15032 1099 aaKnown RBP32.87■■■□□ 2.85
TCF4-230ENST00000565908 MAP2P11137 1827 aaKnown RBP32.86■■■□□ 2.85
TCF4-230ENST00000565908 RGPD3A6NKT7 1758 aaPredicted RBP32.86■■■□□ 2.85
TCF4-230ENST00000565908 RGPD4Q7Z3J3 1758 aa32.86■■■□□ 2.85
TCF4-230ENST00000565908 AMER1Q5JTC6 1135 aaPredicted RBP32.85■■■□□ 2.85
TCF4-230ENST00000565908 NHSQ6T4R5 1651 aa32.85■■■□□ 2.85
TCF4-230ENST00000565908 NUP188Q5SRE5 1749 aa32.82■■■□□ 2.85
TCF4-230ENST00000565908 NCAPD2Q15021 1401 aa32.82■■■□□ 2.84
TCF4-230ENST00000565908 SRCAPQ6ZRS2 3230 aa32.81■■■□□ 2.84
TCF4-230ENST00000565908 EYA1Q99502 592 aa32.81■■■□□ 2.84
TCF4-230ENST00000565908 PER1O15534 1290 aaPredicted RBP32.8■■■□□ 2.84
TCF4-230ENST00000565908 EIF4A2Q14240 407 aaKnown RBP32.8■■■□□ 2.84
TCF4-230ENST00000565908 PROM2Q8N271 834 aa32.79■■■□□ 2.84
TCF4-230ENST00000565908 PCDH11XQ9BZA7 1347 aa32.77■■■□□ 2.84
TCF4-230ENST00000565908 PCDH11YQ9BZA8 1340 aa32.77■■■□□ 2.84
TCF4-230ENST00000565908 TXNRD1Q16881 649 aa32.77■■■□□ 2.84
TCF4-230ENST00000565908 SHANK3Q9BYB0 1731 aa32.75■■■□□ 2.83
TCF4-230ENST00000565908 PRIM1P49642 420 aaKnown RBP32.73■■■□□ 2.83
TCF4-230ENST00000565908 SYTL4Q96C24 671 aaPredicted RBP32.73■■■□□ 2.83
TCF4-230ENST00000565908 SPG7Q9UQ90 795 aa32.71■■■□□ 2.83
TCF4-230ENST00000565908 BTAF1O14981 1849 aa32.7■■■□□ 2.82
TCF4-230ENST00000565908 CC2D1BQ5T0F9 858 aaKnown RBP32.69■■■□□ 2.82
TCF4-230ENST00000565908 ANO8Q9HCE9 1232 aaPredicted RBP32.69■■■□□ 2.82
TCF4-230ENST00000565908 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.69■■■□□ 2.82
TCF4-230ENST00000565908 IGSF1Q8N6C5 1336 aa32.69■■■□□ 2.82
TCF4-230ENST00000565908 NPC1L1Q9UHC9 1359 aa32.69■■■□□ 2.82
TCF4-230ENST00000565908 CYP27B1O15528 508 aa32.68■■■□□ 2.82
TCF4-230ENST00000565908 LRP5O75197 1615 aa32.67■■■□□ 2.82
TCF4-230ENST00000565908 PLEKHG2Q9H7P9 1386 aa32.67■■■□□ 2.82
TCF4-230ENST00000565908 KAT6BQ8WYB5 2073 aa32.66■■■□□ 2.82
TCF4-230ENST00000565908 DOT1LQ8TEK3 1739 aa32.66■■■□□ 2.82
TCF4-230ENST00000565908 STK32BQ9NY57 414 aa32.65■■■□□ 2.82
TCF4-230ENST00000565908 PKD1L3Q7Z443 1732 aa32.65■■■□□ 2.82
TCF4-230ENST00000565908 MTHFSP49914 203 aa32.62■■■□□ 2.81
TCF4-230ENST00000565908 SLC27A3Q5K4L6 730 aa32.62■■■□□ 2.81
TCF4-230ENST00000565908 NKX1-1Q15270 411 aaPredicted RBP32.61■■■□□ 2.81
TCF4-230ENST00000565908 SLC15A2Q16348 729 aa32.6■■■□□ 2.81
TCF4-230ENST00000565908 IL13P35225 146 aa32.59■■■□□ 2.81
TCF4-230ENST00000565908 IFNL2Q8IZJ0 200 aa32.58■■■□□ 2.81
TCF4-230ENST00000565908 LRRC4BQ9NT99 713 aa32.58■■■□□ 2.81
TCF4-230ENST00000565908 PHKG2P15735 406 aa32.56■■■□□ 2.8
TCF4-230ENST00000565908 CNGB1Q14028 1251 aaPredicted RBP32.56■■■□□ 2.8
TCF4-230ENST00000565908 PLEKHO1Q53GL0 409 aaPredicted RBP32.55■■■□□ 2.8
TCF4-230ENST00000565908 SULT6B1Q6IMI4 303 aa32.54■■■□□ 2.8
TCF4-230ENST00000565908 MPRIPQ6WCQ1 1025 aa32.54■■■□□ 2.8
TCF4-230ENST00000565908 AMOTQ4VCS5 1084 aa32.53■■■□□ 2.8
TCF4-230ENST00000565908 AEBP1Q8IUX7 1158 aa32.53■■■□□ 2.8
TCF4-230ENST00000565908 PAPPAQ13219 1627 aa32.52■■■□□ 2.8
TCF4-230ENST00000565908 SPON1Q9HCB6 807 aa32.52■■■□□ 2.8
TCF4-230ENST00000565908 KDRP35968 1356 aa32.51■■■□□ 2.79
TCF4-230ENST00000565908 CCNL1Q9UK58 526 aaPredicted RBP32.5■■■□□ 2.79
TCF4-230ENST00000565908 DIAPH1O60610 1272 aaKnown RBP32.49■■■□□ 2.79
TCF4-230ENST00000565908 HSP90AB1P08238 724 aaKnown RBP32.48■■■□□ 2.79
TCF4-230ENST00000565908 ZNF827Q17R98 1081 aa32.48■■■□□ 2.79
TCF4-230ENST00000565908 SMARCC1Q92922 1105 aaPredicted RBP32.48■■■□□ 2.79
TCF4-230ENST00000565908 TOGARAM1Q9Y4F4 1720 aa32.48■■■□□ 2.79
TCF4-230ENST00000565908 LY75O60449 1722 aa32.47■■■□□ 2.79
TCF4-230ENST00000565908 PIGBQ92521 554 aa32.47■■■□□ 2.79
TCF4-230ENST00000565908 AKT1S1Q96B36 256 aa32.47■■■□□ 2.79
TCF4-230ENST00000565908 PDGFDQ9GZP0 370 aaPredicted RBP32.47■■■□□ 2.79
TCF4-230ENST00000565908 PALLDQ8WX93 1383 aa32.46■■■□□ 2.79
TCF4-230ENST00000565908 CASZ1Q86V15 1759 aa32.46■■■□□ 2.79
TCF4-230ENST00000565908 KCNQ4P56696 695 aa32.46■■■□□ 2.79
TCF4-230ENST00000565908 ZNF530Q6P9A1 599 aaPredicted RBP32.46■■■□□ 2.79
TCF4-230ENST00000565908 TMOD3Q9NYL9 352 aa32.46■■■□□ 2.79
TCF4-230ENST00000565908 HMGB2P26583 209 aaKnown RBP32.45■■■□□ 2.79
TCF4-230ENST00000565908 DCAF5Q96JK2 942 aa32.43■■■□□ 2.78
TCF4-230ENST00000565908 ZBTB7AO95365 584 aa32.42■■■□□ 2.78
TCF4-230ENST00000565908 C1orf141Q5JVX7 400 aa32.42■■■□□ 2.78
TCF4-230ENST00000565908 ITGB4P16144 1822 aa32.4■■■□□ 2.78
TCF4-230ENST00000565908 ERVV-2B6SEH9 535 aa32.4■■■□□ 2.78
TCF4-230ENST00000565908 HMOX1P09601 288 aa32.39■■■□□ 2.78
TCF4-230ENST00000565908 TFCP2L1Q9NZI6 479 aa32.39■■■□□ 2.78
TCF4-230ENST00000565908 PPP1R1BQ9UD71 204 aaPredicted RBP32.39■■■□□ 2.78
TCF4-230ENST00000565908 COL3A1P02461 1466 aaPredicted RBP32.39■■■□□ 2.78
TCF4-230ENST00000565908 CFAP53Q96M91 514 aa32.38■■■□□ 2.77
TCF4-230ENST00000565908 MTFR1LQ9H019 292 aa32.38■■■□□ 2.77
TCF4-230ENST00000565908 ATF5Q9Y2D1 282 aaPredicted RBP32.35■■■□□ 2.77
TCF4-230ENST00000565908 KDM6AO15550 1401 aaPredicted RBP32.34■■■□□ 2.77
TCF4-230ENST00000565908 U2SURPO15042 1029 aaKnown RBP32.34■■■□□ 2.77
TCF4-230ENST00000565908 PPP2R1AP30153 589 aa32.34■■■□□ 2.77
TCF4-230ENST00000565908 ASAP1Q9ULH1 1129 aa32.34■■■□□ 2.77
TCF4-230ENST00000565908 PNPLA7Q6ZV29 1317 aa32.33■■■□□ 2.77
TCF4-230ENST00000565908 LOC102724428A0A0B4J2F2 783 aa32.32■■■□□ 2.76
TCF4-230ENST00000565908 PTGER2P43116 358 aa32.32■■■□□ 2.76
TCF4-230ENST00000565908 SIK1P57059 783 aa32.32■■■□□ 2.76
TCF4-230ENST00000565908 CABP4P57796 275 aa32.32■■■□□ 2.76
TCF4-230ENST00000565908 AKAP4Q5JQC9 854 aa32.32■■■□□ 2.76
TCF4-230ENST00000565908 SLC16A10Q8TF71 515 aa32.32■■■□□ 2.76
TCF4-230ENST00000565908 ATG3Q9NT62 314 aa32.32■■■□□ 2.76
TCF4-230ENST00000565908 QSER1Q2KHR3 1735 aa32.29■■■□□ 2.76
TCF4-230ENST00000565908 C5P01031 1676 aa32.27■■■□□ 2.76
TCF4-230ENST00000565908 NUDCQ9Y266 331 aa32.27■■■□□ 2.76
TCF4-230ENST00000565908 MTHFSDQ2M296 383 aaKnown RBP32.26■■■□□ 2.75
TCF4-230ENST00000565908 SGIP1Q9BQI5 828 aa32.25■■■□□ 2.75
TCF4-230ENST00000565908 ATP6V1AP38606 617 aa32.24■■■□□ 2.75
TCF4-230ENST00000565908 FLAD1Q8NFF5 587 aa32.24■■■□□ 2.75
TCF4-230ENST00000565908 AK7Q96M32 723 aa32.24■■■□□ 2.75
TCF4-230ENST00000565908 NFATC2IPQ8NCF5 419 aa32.23■■■□□ 2.75
TCF4-230ENST00000565908 COL23A1Q86Y22 540 aaPredicted RBP32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms