RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 NBPF20Q3BBV1 942 aa7.31□□□□□ -1.24
LINC00561-201ENST00000565815 PURBQ96QR8 312 aaKnown RBP7.31□□□□□ -1.24
LINC00561-201ENST00000565815 RAB6BQ9NRW1 208 aa7.31□□□□□ -1.24
LINC00561-201ENST00000565815 ZBTB7BO15156 539 aaPredicted RBP7.31□□□□□ -1.24
LINC00561-201ENST00000565815 TRMT44Q8IYL2 757 aaKnown RBP7.31□□□□□ -1.24
LINC00561-201ENST00000565815 GTF2IP78347 998 aa7.3□□□□□ -1.24
LINC00561-201ENST00000565815 SPRYD7Q5W111 196 aa7.3□□□□□ -1.24
LINC00561-201ENST00000565815 PLEKHM2Q8IWE5 1019 aa7.3□□□□□ -1.24
LINC00561-201ENST00000565815 TPCN2Q8NHX9 752 aa7.3□□□□□ -1.24
LINC00561-201ENST00000565815 PRKD2Q9BZL6 878 aa7.3□□□□□ -1.24
LINC00561-201ENST00000565815 WDR62O43379 1518 aa7.3□□□□□ -1.24
LINC00561-201ENST00000565815 J3QL48 77 aa7.3□□□□□ -1.24
LINC00561-201ENST00000565815 GGCXP38435 758 aa7.3□□□□□ -1.24
LINC00561-201ENST00000565815 WNT7BP56706 349 aa7.3□□□□□ -1.24
LINC00561-201ENST00000565815 NFATC2IPQ8NCF5 419 aa7.3□□□□□ -1.24
LINC00561-201ENST00000565815 PKD2L1Q9P0L9 805 aa7.3□□□□□ -1.24
LINC00561-201ENST00000565815 PCDHGA11Q9Y5H2 935 aa7.3□□□□□ -1.24
LINC00561-201ENST00000565815 EML3Q32P44 896 aa7.29□□□□□ -1.24
LINC00561-201ENST00000565815 ZNF697Q5TEC3 545 aa7.29□□□□□ -1.24
LINC00561-201ENST00000565815 TSEN2Q8NCE0 465 aaKnown RBP7.29□□□□□ -1.24
LINC00561-201ENST00000565815 TRAIPQ9BWF2 469 aa7.29□□□□□ -1.24
LINC00561-201ENST00000565815 PCDH10Q9P2E7 1040 aa7.29□□□□□ -1.24
LINC00561-201ENST00000565815 ALDH1A1P00352 501 aa7.29□□□□□ -1.24
LINC00561-201ENST00000565815 ADD1P35611 737 aaKnown RBP7.29□□□□□ -1.24
LINC00561-201ENST00000565815 TRIM67Q6ZTA4 783 aa7.29□□□□□ -1.24
LINC00561-201ENST00000565815 ACIN1Q9UKV3 1341 aaKnown RBP7.29□□□□□ -1.24
LINC00561-201ENST00000565815 PRMT3O60678 531 aa7.29□□□□□ -1.24
LINC00561-201ENST00000565815 CSB-PGBD3P0DP91 1061 aa7.29□□□□□ -1.24
LINC00561-201ENST00000565815 VARSP26640 1264 aaKnown RBP7.29□□□□□ -1.24
LINC00561-201ENST00000565815 PSME1Q06323 249 aa7.29□□□□□ -1.24
LINC00561-201ENST00000565815 FAM196BA6NMK8 535 aa7.28□□□□□ -1.24
LINC00561-201ENST00000565815 CBLBQ13191 982 aa7.28□□□□□ -1.24
LINC00561-201ENST00000565815 KIF21AQ7Z4S6 1674 aa7.28□□□□□ -1.24
LINC00561-201ENST00000565815 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.28□□□□□ -1.24
LINC00561-201ENST00000565815 OSBPL3Q9H4L5 887 aa7.28□□□□□ -1.24
LINC00561-201ENST00000565815 CADPSQ9ULU8 1353 aa7.27□□□□□ -1.25
LINC00561-201ENST00000565815 TBCELQ5QJ74 424 aa7.27□□□□□ -1.25
LINC00561-201ENST00000565815 PPP1R26Q5T8A7 1209 aaPredicted RBP7.27□□□□□ -1.25
LINC00561-201ENST00000565815 PRIMPOLQ96LW4 560 aa7.27□□□□□ -1.25
LINC00561-201ENST00000565815 DNAAF2Q9NVR5 837 aaKnown RBP7.27□□□□□ -1.25
LINC00561-201ENST00000565815 CCDC102BQ68D86 513 aa7.27□□□□□ -1.25
LINC00561-201ENST00000565815 A0A0G2JS52 829 aa7.26□□□□□ -1.25
LINC00561-201ENST00000565815 LILRA1O75019 489 aa7.26□□□□□ -1.25
LINC00561-201ENST00000565815 CD2BP2O95400 341 aaKnown RBP7.26□□□□□ -1.25
LINC00561-201ENST00000565815 ADH1CP00326 375 aa7.26□□□□□ -1.25
LINC00561-201ENST00000565815 RPIAP49247 311 aa7.26□□□□□ -1.25
LINC00561-201ENST00000565815 ANKMY2Q8IV38 441 aa7.26□□□□□ -1.25
LINC00561-201ENST00000565815 ITPKCQ96DU7 683 aa7.26□□□□□ -1.25
LINC00561-201ENST00000565815 CDK15Q96Q40 435 aa7.26□□□□□ -1.25
LINC00561-201ENST00000565815 ZFAND3Q9H8U3 227 aa7.26□□□□□ -1.25
LINC00561-201ENST00000565815 TMEM229AB2RXF0 380 aa7.25□□□□□ -1.25
LINC00561-201ENST00000565815 SCNN1DP51172 638 aa7.25□□□□□ -1.25
LINC00561-201ENST00000565815 KCTD17Q8N5Z5 321 aa7.25□□□□□ -1.25
LINC00561-201ENST00000565815 KDF1Q8NAX2 398 aaPredicted RBP7.25□□□□□ -1.25
LINC00561-201ENST00000565815 MKNK1Q9BUB5 465 aa7.25□□□□□ -1.25
LINC00561-201ENST00000565815 USP3Q9Y6I4 520 aa7.25□□□□□ -1.25
LINC00561-201ENST00000565815 ATP5J2-PTCD1G3V325 749 aa7.25□□□□□ -1.25
LINC00561-201ENST00000565815 NOD1Q9Y239 953 aa7.25□□□□□ -1.25
LINC00561-201ENST00000565815 WNT7AO00755 349 aa7.24□□□□□ -1.25
LINC00561-201ENST00000565815 SERPINB4P48594 390 aa7.24□□□□□ -1.25
LINC00561-201ENST00000565815 IVNS1ABPQ9Y6Y0 642 aa7.24□□□□□ -1.25
LINC00561-201ENST00000565815 ERVK-9P63128 1117 aa7.24□□□□□ -1.25
LINC00561-201ENST00000565815 MTMR3Q13615 1198 aa7.24□□□□□ -1.25
LINC00561-201ENST00000565815 MAP7D1Q3KQU3 841 aa7.24□□□□□ -1.25
LINC00561-201ENST00000565815 LARP1Q6PKG0 1096 aaKnown RBP7.24□□□□□ -1.25
LINC00561-201ENST00000565815 AGBL1Q96MI9 1066 aa7.24□□□□□ -1.25
LINC00561-201ENST00000565815 SERTAD1Q9UHV2 236 aa7.24□□□□□ -1.25
LINC00561-201ENST00000565815 NNTQ13423 1086 aa7.23□□□□□ -1.25
LINC00561-201ENST00000565815 CCDC116Q8IYX3 515 aa7.23□□□□□ -1.25
LINC00561-201ENST00000565815 GZF1Q9H116 711 aaPredicted RBP7.23□□□□□ -1.25
LINC00561-201ENST00000565815 ETNK1Q9HBU6 452 aa7.23□□□□□ -1.25
LINC00561-201ENST00000565815 ARHGEF10LQ9HCE6 1279 aa7.23□□□□□ -1.25
LINC00561-201ENST00000565815 MAP4K5Q9Y4K4 846 aa7.23□□□□□ -1.25
LINC00561-201ENST00000565815 FAM200AQ8TCP9 573 aa7.23□□□□□ -1.25
LINC00561-201ENST00000565815 SIX5Q8N196 739 aa7.22□□□□□ -1.25
LINC00561-201ENST00000565815 CEP164Q9UPV0 1460 aa7.22□□□□□ -1.25
LINC00561-201ENST00000565815 GDF9O60383 454 aa7.22□□□□□ -1.25
LINC00561-201ENST00000565815 OCLNQ16625 522 aa7.22□□□□□ -1.25
LINC00561-201ENST00000565815 USTQ9Y2C2 406 aa7.22□□□□□ -1.25
LINC00561-201ENST00000565815 ZNF598Q86UK7 904 aaKnown RBP7.21□□□□□ -1.25
LINC00561-201ENST00000565815 TNS4Q8IZW8 715 aa7.21□□□□□ -1.25
LINC00561-201ENST00000565815 ANO2Q9NQ90 1003 aa7.21□□□□□ -1.25
LINC00561-201ENST00000565815 ELOAQ14241 798 aaKnown RBP7.21□□□□□ -1.26
LINC00561-201ENST00000565815 HPS1Q92902 700 aa7.21□□□□□ -1.26
LINC00561-201ENST00000565815 ZNF358Q9NW07 568 aa7.21□□□□□ -1.26
LINC00561-201ENST00000565815 SH3PXD2AQ5TCZ1 1133 aa7.21□□□□□ -1.26
LINC00561-201ENST00000565815 HINFPQ9BQA5 517 aa7.21□□□□□ -1.26
LINC00561-201ENST00000565815 USP4Q13107 963 aa7.2□□□□□ -1.26
LINC00561-201ENST00000565815 KLF16Q9BXK1 252 aaPredicted RBP7.2□□□□□ -1.26
LINC00561-201ENST00000565815 ZNF395Q9H8N7 513 aaPredicted RBP7.2□□□□□ -1.26
LINC00561-201ENST00000565815 SSFA2P28290 1259 aa7.2□□□□□ -1.26
LINC00561-201ENST00000565815 CC2D2BQ6DHV5 1058 aa7.2□□□□□ -1.26
LINC00561-201ENST00000565815 SEPT12Q8IYM1 358 aa7.2□□□□□ -1.26
LINC00561-201ENST00000565815 TSPAN10Q9H1Z9 355 aaPredicted RBP7.2□□□□□ -1.26
LINC00561-201ENST00000565815 SEPT3Q9UH03 358 aa7.2□□□□□ -1.26
LINC00561-201ENST00000565815 ZBTB7CA1YPR0 619 aa7.19□□□□□ -1.26
LINC00561-201ENST00000565815 GDF10P55107 478 aa7.19□□□□□ -1.26
LINC00561-201ENST00000565815 FKBP5Q13451 457 aaPredicted RBP7.19□□□□□ -1.26
LINC00561-201ENST00000565815 LARGE2Q8N3Y3 721 aa7.19□□□□□ -1.26
LINC00561-201ENST00000565815 SMPD1P17405 629 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms