RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-229ENST00000565580 SRPK2P78362 688 aaKnown RBP9.17□□□□□ -0.94
TCF4-229ENST00000565580 AMER1Q5JTC6 1135 aaPredicted RBP9.17□□□□□ -0.94
TCF4-229ENST00000565580 KRT27Q7Z3Y8 459 aa9.17□□□□□ -0.94
TCF4-229ENST00000565580 DEFB132Q7Z7B7 95 aa9.17□□□□□ -0.94
TCF4-229ENST00000565580 CCDC125Q86Z20 511 aa9.17□□□□□ -0.94
TCF4-229ENST00000565580 ZNF687Q8N1G0 1237 aa9.17□□□□□ -0.94
TCF4-229ENST00000565580 TRPM1Q7Z4N2 1603 aa9.16□□□□□ -0.94
TCF4-229ENST00000565580 A0A0G2JS52 829 aa9.16□□□□□ -0.94
TCF4-229ENST00000565580 ZC3H6P61129 1189 aaKnown RBP9.16□□□□□ -0.94
TCF4-229ENST00000565580 MYT1Q01538 1121 aa9.16□□□□□ -0.94
TCF4-229ENST00000565580 GPR153Q6NV75 609 aa9.16□□□□□ -0.94
TCF4-229ENST00000565580 NRKQ7Z2Y5 1582 aa9.16□□□□□ -0.94
TCF4-229ENST00000565580 USP19O94966 1318 aa9.15□□□□□ -0.94
TCF4-229ENST00000565580 PTGER2P43116 358 aa9.15□□□□□ -0.94
TCF4-229ENST00000565580 FAM182BQ5T319 152 aa9.15□□□□□ -0.94
TCF4-229ENST00000565580 ABTB2Q8N961 1025 aa9.15□□□□□ -0.94
TCF4-229ENST00000565580 BCL11BQ9C0K0 894 aaPredicted RBP9.15□□□□□ -0.94
TCF4-229ENST00000565580 STRN4Q9NRL3 753 aa9.15□□□□□ -0.94
TCF4-229ENST00000565580 CABP1Q9NZU7 370 aa9.15□□□□□ -0.94
TCF4-229ENST00000565580 ROCK2O75116 1388 aaKnown RBP9.14□□□□□ -0.95
TCF4-229ENST00000565580 THSD7AQ9UPZ6 1657 aa9.14□□□□□ -0.95
TCF4-229ENST00000565580 SPATA31A1Q5TZJ5 1347 aa9.13□□□□□ -0.95
TCF4-229ENST00000565580 STK24Q9Y6E0 443 aa9.13□□□□□ -0.95
TCF4-229ENST00000565580 CAMTA1Q9Y6Y1 1673 aa9.13□□□□□ -0.95
TCF4-229ENST00000565580 USP6P35125 1406 aa9.13□□□□□ -0.95
TCF4-229ENST00000565580 CPDO75976 1380 aa9.12□□□□□ -0.95
TCF4-229ENST00000565580 GCP02774 474 aa9.12□□□□□ -0.95
TCF4-229ENST00000565580 NLRP13Q86W25 1043 aa9.12□□□□□ -0.95
TCF4-229ENST00000565580 RNF166Q96A37 237 aaPredicted RBP9.12□□□□□ -0.95
TCF4-229ENST00000565580 LMO7Q8WWI1 1683 aa9.12□□□□□ -0.95
TCF4-229ENST00000565580 SSH2Q76I76 1423 aa9.12□□□□□ -0.95
TCF4-229ENST00000565580 EVC2Q86UK5 1308 aa9.11□□□□□ -0.95
TCF4-229ENST00000565580 SF3B2Q13435 895 aaKnown RBP9.11□□□□□ -0.95
TCF4-229ENST00000565580 LARP1Q6PKG0 1096 aaKnown RBP9.11□□□□□ -0.95
TCF4-229ENST00000565580 FBXO22Q8NEZ5 403 aa9.11□□□□□ -0.95
TCF4-229ENST00000565580 USP35Q9P2H5 1018 aa9.11□□□□□ -0.95
TCF4-229ENST00000565580 BRD4O60885 1362 aaPredicted RBP9.11□□□□□ -0.95
TCF4-229ENST00000565580 STK25O00506 426 aa9.1□□□□□ -0.95
TCF4-229ENST00000565580 EVA1CP58658 441 aa9.1□□□□□ -0.95
TCF4-229ENST00000565580 SLIT3O75094 1523 aa9.1□□□□□ -0.95
TCF4-229ENST00000565580 PIK3C2AO00443 1686 aa9.1□□□□□ -0.95
TCF4-229ENST00000565580 COL5A2P05997 1499 aaPredicted RBP9.09□□□□□ -0.95
TCF4-229ENST00000565580 ZBTB7CA1YPR0 619 aa9.09□□□□□ -0.95
TCF4-229ENST00000565580 TTC21BQ7Z4L5 1316 aa9.08□□□□□ -0.96
TCF4-229ENST00000565580 ECM2O94769 699 aaPredicted RBP9.08□□□□□ -0.96
TCF4-229ENST00000565580 BAG6P46379 1132 aa9.08□□□□□ -0.96
TCF4-229ENST00000565580 EN1Q05925 392 aaPredicted RBP9.08□□□□□ -0.96
TCF4-229ENST00000565580 ARSIQ5FYB1 569 aa9.08□□□□□ -0.96
TCF4-229ENST00000565580 BARGINQ6ZT62 677 aa9.08□□□□□ -0.96
TCF4-229ENST00000565580 TCP11L2Q8N4U5 519 aa9.08□□□□□ -0.96
TCF4-229ENST00000565580 CARD11Q9BXL7 1154 aa9.08□□□□□ -0.96
TCF4-229ENST00000565580 AKAP12Q02952 1782 aa9.08□□□□□ -0.96
TCF4-229ENST00000565580 RGPD1P0DJD0 1748 aa9.08□□□□□ -0.96
TCF4-229ENST00000565580 TNS1Q9HBL0 1735 aaKnown RBP9.08□□□□□ -0.96
TCF4-229ENST00000565580 CPSF1Q10570 1443 aaKnown RBP9.07□□□□□ -0.96
TCF4-229ENST00000565580 ZNF316A6NFI3 1004 aaPredicted RBP9.07□□□□□ -0.96
TCF4-229ENST00000565580 AXIN2Q9Y2T1 843 aa9.07□□□□□ -0.96
TCF4-229ENST00000565580 AATKQ6ZMQ8 1374 aa9.07□□□□□ -0.96
TCF4-229ENST00000565580 TONSLQ96HA7 1378 aa9.07□□□□□ -0.96
TCF4-229ENST00000565580 SBNO2Q9Y2G9 1366 aa9.07□□□□□ -0.96
TCF4-229ENST00000565580 COL18A1P39060 1754 aa9.07□□□□□ -0.96
TCF4-229ENST00000565580 PSDA5PKW4 1024 aaPredicted RBP9.06□□□□□ -0.96
TCF4-229ENST00000565580 TRIM37O94972 964 aa9.06□□□□□ -0.96
TCF4-229ENST00000565580 FAM196AQ6ZSG2 479 aa9.06□□□□□ -0.96
TCF4-229ENST00000565580 MFRPQ9BY79 579 aa9.06□□□□□ -0.96
TCF4-229ENST00000565580 KTN1Q86UP2 1357 aaKnown RBP9.06□□□□□ -0.96
TCF4-229ENST00000565580 CD163L1Q9NR16 1453 aa9.06□□□□□ -0.96
TCF4-229ENST00000565580 TTC21AQ8NDW8 1320 aa9.05□□□□□ -0.96
TCF4-229ENST00000565580 DISP2A7MBM2 1401 aa9.05□□□□□ -0.96
TCF4-229ENST00000565580 CRB1P82279 1406 aa9.05□□□□□ -0.96
TCF4-229ENST00000565580 PDE3BQ13370 1112 aa9.05□□□□□ -0.96
TCF4-229ENST00000565580 EZH2Q15910 746 aaKnown RBP9.05□□□□□ -0.96
TCF4-229ENST00000565580 ARHGEF25Q86VW2 580 aa9.05□□□□□ -0.96
TCF4-229ENST00000565580 THRAP3Q9Y2W1 955 aaKnown RBP9.05□□□□□ -0.96
TCF4-229ENST00000565580 MON2Q7Z3U7 1717 aa9.05□□□□□ -0.96
TCF4-229ENST00000565580 NFAT5O94916 1531 aa9.05□□□□□ -0.96
TCF4-229ENST00000565580 TRIM26Q12899 539 aaPredicted RBP9.04□□□□□ -0.96
TCF4-229ENST00000565580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.96
TCF4-229ENST00000565580 CAMKK2Q96RR4 588 aa9.04□□□□□ -0.96
TCF4-229ENST00000565580 SLC12A5Q9H2X9 1139 aa9.04□□□□□ -0.96
TCF4-229ENST00000565580 PARP4Q9UKK3 1724 aaKnown RBP9.04□□□□□ -0.96
TCF4-229ENST00000565580 WDR17Q8IZU2 1322 aa9.04□□□□□ -0.96
TCF4-229ENST00000565580 KIF3CO14782 793 aa9.03□□□□□ -0.96
TCF4-229ENST00000565580 APBA3O96018 575 aa9.03□□□□□ -0.96
TCF4-229ENST00000565580 PBX2P40425 430 aa9.03□□□□□ -0.96
TCF4-229ENST00000565580 TOM1L2Q6ZVM7 507 aa9.03□□□□□ -0.96
TCF4-229ENST00000565580 NME9Q86XW9 330 aa9.03□□□□□ -0.96
TCF4-229ENST00000565580 KCNH5Q8NCM2 988 aa9.03□□□□□ -0.96
TCF4-229ENST00000565580 TMC1Q8TDI8 760 aa9.03□□□□□ -0.96
TCF4-229ENST00000565580 RGPD5Q99666 1765 aa9.03□□□□□ -0.96
TCF4-229ENST00000565580 LRRC37A3O60309 1634 aa9.02□□□□□ -0.96
TCF4-229ENST00000565580 USP31Q70CQ4 1352 aa9.02□□□□□ -0.97
TCF4-229ENST00000565580 SLC34A2O95436 690 aa9.02□□□□□ -0.97
TCF4-229ENST00000565580 R3HDM1Q15032 1099 aaKnown RBP9.02□□□□□ -0.97
TCF4-229ENST00000565580 TMC2Q8TDI7 906 aa9.02□□□□□ -0.97
TCF4-229ENST00000565580 TESK2Q96S53 571 aa9.02□□□□□ -0.97
TCF4-229ENST00000565580 PEAK1Q9H792 1746 aa9.02□□□□□ -0.97
TCF4-229ENST00000565580 A0A1W2PP64 1363 aa9.01□□□□□ -0.97
TCF4-229ENST00000565580 ST20-MTHFSA0A0A6YYL1 179 aa9.01□□□□□ -0.97
TCF4-229ENST00000565580 C2orf72A6NCS6 295 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms