RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ZBTB7AO95365 584 aa33.05■■■□□ 2.88
RAB40C-209ENST00000565511 LRRC4BQ9NT99 713 aa33.05■■■□□ 2.88
RAB40C-209ENST00000565511 EMILIN1Q9Y6C2 1016 aa33.05■■■□□ 2.88
RAB40C-209ENST00000565511 FLT4P35916 1363 aa33.04■■■□□ 2.88
RAB40C-209ENST00000565511 ZCRB1Q8TBF4 217 aaKnown RBP33.02■■■□□ 2.88
RAB40C-209ENST00000565511 SMG6Q86US8 1419 aaKnown RBP33.02■■■□□ 2.88
RAB40C-209ENST00000565511 ZNF827Q17R98 1081 aa33.01■■■□□ 2.87
RAB40C-209ENST00000565511 MAP2P11137 1827 aaKnown RBP33■■■□□ 2.87
RAB40C-209ENST00000565511 LY75O60449 1722 aa33■■■□□ 2.87
RAB40C-209ENST00000565511 TUBGCP6Q96RT7 1819 aa33■■■□□ 2.87
RAB40C-209ENST00000565511 PTGER2P43116 358 aa32.99■■■□□ 2.87
RAB40C-209ENST00000565511 PRIM1P49642 420 aaKnown RBP32.99■■■□□ 2.87
RAB40C-209ENST00000565511 PPP1R1BQ9UD71 204 aaPredicted RBP32.99■■■□□ 2.87
RAB40C-209ENST00000565511 KIF24Q5T7B8 1368 aa32.98■■■□□ 2.87
RAB40C-209ENST00000565511 HSPA5P11021 654 aaKnown RBP32.98■■■□□ 2.87
RAB40C-209ENST00000565511 POLR3GLQ9BT43 218 aa32.98■■■□□ 2.87
RAB40C-209ENST00000565511 ATF5Q9Y2D1 282 aaPredicted RBP32.97■■■□□ 2.87
RAB40C-209ENST00000565511 CCER1Q8TC90 406 aaPredicted RBP32.96■■■□□ 2.87
RAB40C-209ENST00000565511 KCNQ4P56696 695 aa32.95■■■□□ 2.87
RAB40C-209ENST00000565511 SYTL4Q96C24 671 aaPredicted RBP32.95■■■□□ 2.87
RAB40C-209ENST00000565511 NCAPD2Q15021 1401 aa32.94■■■□□ 2.86
RAB40C-209ENST00000565511 PKD1L3Q7Z443 1732 aa32.94■■■□□ 2.86
RAB40C-209ENST00000565511 TOGARAM1Q9Y4F4 1720 aa32.94■■■□□ 2.86
RAB40C-209ENST00000565511 QSER1Q2KHR3 1735 aa32.93■■■□□ 2.86
RAB40C-209ENST00000565511 RAPGEF4Q8WZA2 1011 aa32.92■■■□□ 2.86
RAB40C-209ENST00000565511 AKT1S1Q96B36 256 aa32.91■■■□□ 2.86
RAB40C-209ENST00000565511 CGNL1Q0VF96 1302 aa32.91■■■□□ 2.86
RAB40C-209ENST00000565511 TATP17735 454 aaPredicted RBP32.9■■■□□ 2.86
RAB40C-209ENST00000565511 EIF4G2P78344 907 aaKnown RBP eCLIP32.9■■■□□ 2.861e-6■■■■□ 25.9
RAB40C-209ENST00000565511 SGIP1Q9BQI5 828 aa32.9■■■□□ 2.86
RAB40C-209ENST00000565511 PPM1GO15355 546 aaPredicted RBP32.88■■■□□ 2.85
RAB40C-209ENST00000565511 MTFR1LQ9H019 292 aa32.87■■■□□ 2.85
RAB40C-209ENST00000565511 SLC27A3Q5K4L6 730 aa32.86■■■□□ 2.85
RAB40C-209ENST00000565511 POLKQ9UBT6 870 aa32.86■■■□□ 2.85
RAB40C-209ENST00000565511 ITGB4P16144 1822 aa32.86■■■□□ 2.85
RAB40C-209ENST00000565511 WASHC2AQ641Q2 1341 aa32.85■■■□□ 2.85
RAB40C-209ENST00000565511 CYP27B1O15528 508 aa32.85■■■□□ 2.85
RAB40C-209ENST00000565511 PCDH11XQ9BZA7 1347 aa32.84■■■□□ 2.85
RAB40C-209ENST00000565511 PCDH11YQ9BZA8 1340 aa32.84■■■□□ 2.85
RAB40C-209ENST00000565511 COL24A1Q17RW2 1714 aa32.82■■■□□ 2.85
RAB40C-209ENST00000565511 TNNT2P45379 298 aaPredicted RBP32.82■■■□□ 2.84
RAB40C-209ENST00000565511 PNPLA7Q6ZV29 1317 aa32.81■■■□□ 2.84
RAB40C-209ENST00000565511 EYA1Q99502 592 aa32.81■■■□□ 2.84
RAB40C-209ENST00000565511 PANK3Q9H999 370 aa32.81■■■□□ 2.84
RAB40C-209ENST00000565511 C5P01031 1676 aa32.78■■■□□ 2.84
RAB40C-209ENST00000565511 FHDC1Q9C0D6 1143 aaPredicted RBP32.78■■■□□ 2.84
RAB40C-209ENST00000565511 TAF1LQ8IZX4 1826 aa32.77■■■□□ 2.84
RAB40C-209ENST00000565511 CCNL1Q9UK58 526 aaPredicted RBP32.77■■■□□ 2.84
RAB40C-209ENST00000565511 EIF4A2Q14240 407 aaKnown RBP32.75■■■□□ 2.83
RAB40C-209ENST00000565511 SYT17Q9BSW7 474 aa32.73■■■□□ 2.83
RAB40C-209ENST00000565511 TFCP2L1Q9NZI6 479 aa32.72■■■□□ 2.83
RAB40C-209ENST00000565511 PALLDQ8WX93 1383 aa32.71■■■□□ 2.83
RAB40C-209ENST00000565511 MPRIPQ6WCQ1 1025 aa32.71■■■□□ 2.83
RAB40C-209ENST00000565511 ARXQ96QS3 562 aa32.71■■■□□ 2.83
RAB40C-209ENST00000565511 NKX1-1Q15270 411 aaPredicted RBP32.68■■■□□ 2.82
RAB40C-209ENST00000565511 YY1P25490 414 aa32.66■■■□□ 2.82
RAB40C-209ENST00000565511 PIGBQ92521 554 aa32.66■■■□□ 2.82
RAB40C-209ENST00000565511 SLC16A10Q8TF71 515 aa32.65■■■□□ 2.82
RAB40C-209ENST00000565511 SPG7Q9UQ90 795 aa32.65■■■□□ 2.82
RAB40C-209ENST00000565511 C4BP0C0L5 1744 aa32.64■■■□□ 2.82
RAB40C-209ENST00000565511 COL23A1Q86Y22 540 aaPredicted RBP32.64■■■□□ 2.82
RAB40C-209ENST00000565511 IGSF1Q8N6C5 1336 aa32.64■■■□□ 2.82
RAB40C-209ENST00000565511 MAP3K5Q99683 1374 aa32.64■■■□□ 2.82
RAB40C-209ENST00000565511 KIF7Q2M1P5 1343 aa32.62■■■□□ 2.81
RAB40C-209ENST00000565511 PHKG2P15735 406 aa32.62■■■□□ 2.81
RAB40C-209ENST00000565511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.62■■■□□ 2.81
RAB40C-209ENST00000565511 AMIGO3Q86WK7 504 aa32.61■■■□□ 2.81
RAB40C-209ENST00000565511 UTRNP46939 3433 aa32.61■■■□□ 2.81
RAB40C-209ENST00000565511 UBR3Q6ZT12 1888 aa32.61■■■□□ 2.81
RAB40C-209ENST00000565511 MORC1Q86VD1 984 aa32.59■■■□□ 2.81
RAB40C-209ENST00000565511 DCAF8L1A6NGE4 600 aa32.57■■■□□ 2.8
RAB40C-209ENST00000565511 AMER1Q5JTC6 1135 aaPredicted RBP32.56■■■□□ 2.8
RAB40C-209ENST00000565511 MSL1Q68DK7 614 aa32.56■■■□□ 2.8
RAB40C-209ENST00000565511 SMIM5Q71RC9 77 aa32.56■■■□□ 2.8
RAB40C-209ENST00000565511 IFNL2Q8IZJ0 200 aa32.56■■■□□ 2.8
RAB40C-209ENST00000565511 AEBP1Q8IUX7 1158 aa32.55■■■□□ 2.8
RAB40C-209ENST00000565511 SMARCC1Q92922 1105 aaPredicted RBP32.55■■■□□ 2.8
RAB40C-209ENST00000565511 MSH5O43196 834 aa32.54■■■□□ 2.8
RAB40C-209ENST00000565511 POLD1P28340 1107 aa32.54■■■□□ 2.8
RAB40C-209ENST00000565511 KLHL34Q8N239 644 aa32.54■■■□□ 2.8
RAB40C-209ENST00000565511 ASAP1Q9ULH1 1129 aa32.54■■■□□ 2.8
RAB40C-209ENST00000565511 KNSTRNQ9Y448 316 aa32.53■■■□□ 2.8
RAB40C-209ENST00000565511 TMOD3Q9NYL9 352 aa32.52■■■□□ 2.8
RAB40C-209ENST00000565511 PLEKHG2Q9H7P9 1386 aa32.52■■■□□ 2.8
RAB40C-209ENST00000565511 KDM6AO15550 1401 aaPredicted RBP32.51■■■□□ 2.8
RAB40C-209ENST00000565511 LINC00116Q8NCU8 138 aa32.51■■■□□ 2.79
RAB40C-209ENST00000565511 NLGN2Q8NFZ4 835 aa32.51■■■□□ 2.79
RAB40C-209ENST00000565511 CHD4Q14839 1912 aa32.5■■■□□ 2.79
RAB40C-209ENST00000565511 LOC102724428A0A0B4J2F2 783 aa32.49■■■□□ 2.79
RAB40C-209ENST00000565511 SIK1P57059 783 aa32.49■■■□□ 2.79
RAB40C-209ENST00000565511 ITPK1Q13572 414 aa32.49■■■□□ 2.79
RAB40C-209ENST00000565511 ATG3Q9NT62 314 aa32.48■■■□□ 2.79
RAB40C-209ENST00000565511 KDRP35968 1356 aa32.46■■■□□ 2.79
RAB40C-209ENST00000565511 IL13P35225 146 aa32.46■■■□□ 2.79
RAB40C-209ENST00000565511 AK7Q96M32 723 aa32.45■■■□□ 2.79
RAB40C-209ENST00000565511 PER1O15534 1290 aaPredicted RBP32.44■■■□□ 2.78
RAB40C-209ENST00000565511 PHF14O94880 888 aa32.44■■■□□ 2.78
RAB40C-209ENST00000565511 ZNF530Q6P9A1 599 aaPredicted RBP32.44■■■□□ 2.78
RAB40C-209ENST00000565511 SLC4A9Q96Q91 983 aa32.43■■■□□ 2.78
RAB40C-209ENST00000565511 PLEKHO1Q53GL0 409 aaPredicted RBP32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms