RNA–Protein interactions for RNA: ENST00000565377.1

RPUSD1-205, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-205ENST00000565377 RGPD1P0DJD0 1748 aa26.81■■□□□ 1.88
RPUSD1-205ENST00000565377 U2AF1L5P0DN76 240 aaPredicted RBP26.8■■□□□ 1.88
RPUSD1-205ENST00000565377 U2AF1Q01081 240 aaKnown RBP eCLIP26.8■■□□□ 1.88
RPUSD1-205ENST00000565377 ILDR2Q71H61 639 aa26.8■■□□□ 1.88
RPUSD1-205ENST00000565377 MEGF6O75095 1541 aa26.8■■□□□ 1.88
RPUSD1-205ENST00000565377 DIEXFQ68CQ4 756 aaKnown RBP26.79■■□□□ 1.88
RPUSD1-205ENST00000565377 LRRC37A3O60309 1634 aa26.79■■□□□ 1.88
RPUSD1-205ENST00000565377 PLEKHO1Q53GL0 409 aaPredicted RBP26.78■■□□□ 1.88
RPUSD1-205ENST00000565377 FAM196AQ6ZSG2 479 aa26.78■■□□□ 1.88
RPUSD1-205ENST00000565377 PCDH11XQ9BZA7 1347 aa26.78■■□□□ 1.88
RPUSD1-205ENST00000565377 PCDH11YQ9BZA8 1340 aa26.78■■□□□ 1.88
RPUSD1-205ENST00000565377 FCHSD2O94868 740 aa26.77■■□□□ 1.88
RPUSD1-205ENST00000565377 NEFMP07197 916 aa26.77■■□□□ 1.88
RPUSD1-205ENST00000565377 HMOX1P09601 288 aa26.76■■□□□ 1.87
RPUSD1-205ENST00000565377 WDR43Q15061 677 aaKnown RBP eCLIP26.76■■□□□ 1.87
RPUSD1-205ENST00000565377 AEBP1Q8IUX7 1158 aa26.75■■□□□ 1.87
RPUSD1-205ENST00000565377 DDX54Q8TDD1 881 aaKnown RBP26.73■■□□□ 1.87
RPUSD1-205ENST00000565377 BRWD3Q6RI45 1802 aa26.73■■□□□ 1.87
RPUSD1-205ENST00000565377 BCL9O00512 1426 aa26.73■■□□□ 1.87
RPUSD1-205ENST00000565377 MARCH10Q8NA82 808 aaPredicted RBP26.72■■□□□ 1.87
RPUSD1-205ENST00000565377 HSP90AB1P08238 724 aaKnown RBP26.7■■□□□ 1.86
RPUSD1-205ENST00000565377 IFNL2Q8IZJ0 200 aa26.7■■□□□ 1.86
RPUSD1-205ENST00000565377 RSPH6AQ9H0K4 717 aa26.7■■□□□ 1.86
RPUSD1-205ENST00000565377 CCDC125Q86Z20 511 aa26.69■■□□□ 1.86
RPUSD1-205ENST00000565377 MRS2Q9HD23 443 aa26.69■■□□□ 1.86
RPUSD1-205ENST00000565377 PKD1L3Q7Z443 1732 aa26.68■■□□□ 1.86
RPUSD1-205ENST00000565377 C1orf141Q5JVX7 400 aa26.68■■□□□ 1.86
RPUSD1-205ENST00000565377 GAS2L2Q8NHY3 880 aa26.68■■□□□ 1.86
RPUSD1-205ENST00000565377 PRKAR2BP31323 418 aa26.67■■□□□ 1.86
RPUSD1-205ENST00000565377 ZNF530Q6P9A1 599 aaPredicted RBP26.66■■□□□ 1.86
RPUSD1-205ENST00000565377 MAPK8IP3Q9UPT6 1336 aa26.65■■□□□ 1.86
RPUSD1-205ENST00000565377 PHKG2P15735 406 aa26.64■■□□□ 1.86
RPUSD1-205ENST00000565377 SF3B2Q13435 895 aaKnown RBP26.64■■□□□ 1.86
RPUSD1-205ENST00000565377 CCER2I3L3R5 266 aa26.63■■□□□ 1.85
RPUSD1-205ENST00000565377 CYP27B1O15528 508 aa26.63■■□□□ 1.85
RPUSD1-205ENST00000565377 NKX1-1Q15270 411 aaPredicted RBP26.63■■□□□ 1.85
RPUSD1-205ENST00000565377 FAM182BQ5T319 152 aa26.63■■□□□ 1.85
RPUSD1-205ENST00000565377 AKAP4Q5JQC9 854 aa26.62■■□□□ 1.85
RPUSD1-205ENST00000565377 DCAF5Q96JK2 942 aa26.61■■□□□ 1.85
RPUSD1-205ENST00000565377 EP400Q96L91 3159 aa26.6■■□□□ 1.85
RPUSD1-205ENST00000565377 MTHFSDQ2M296 383 aaKnown RBP26.59■■□□□ 1.85
RPUSD1-205ENST00000565377 BCL11BQ9C0K0 894 aaPredicted RBP26.59■■□□□ 1.85
RPUSD1-205ENST00000565377 ADAMTS8Q9UP79 889 aa26.59■■□□□ 1.85
RPUSD1-205ENST00000565377 SHANK3Q9BYB0 1731 aa26.59■■□□□ 1.85
RPUSD1-205ENST00000565377 SOCS7O14512 581 aa26.57■■□□□ 1.84
RPUSD1-205ENST00000565377 PNISRQ8TF01 805 aaKnown RBP26.57■■□□□ 1.84
RPUSD1-205ENST00000565377 RUNDC1Q96C34 613 aa26.57■■□□□ 1.84
RPUSD1-205ENST00000565377 PLEKHF1Q96S99 279 aa26.57■■□□□ 1.84
RPUSD1-205ENST00000565377 TRIM37O94972 964 aa26.56■■□□□ 1.84
RPUSD1-205ENST00000565377 UPF1Q92900 1129 aaKnown RBP eCLIP26.56■■□□□ 1.84
RPUSD1-205ENST00000565377 PHACTR3Q96KR7 559 aa26.56■■□□□ 1.84
RPUSD1-205ENST00000565377 GNAT3A8MTJ3 354 aa26.55■■□□□ 1.84
RPUSD1-205ENST00000565377 ERVV-2B6SEH9 535 aa26.55■■□□□ 1.84
RPUSD1-205ENST00000565377 HTATSF1O43719 755 aaKnown RBP26.54■■□□□ 1.84
RPUSD1-205ENST00000565377 CCDC184Q52MB2 194 aa26.54■■□□□ 1.84
RPUSD1-205ENST00000565377 RTF1Q92541 710 aaKnown RBP26.53■■□□□ 1.84
RPUSD1-205ENST00000565377 MAP3K5Q99683 1374 aa26.53■■□□□ 1.84
RPUSD1-205ENST00000565377 BAG6P46379 1132 aa26.52■■□□□ 1.84
RPUSD1-205ENST00000565377 SYTL4Q96C24 671 aaPredicted RBP26.52■■□□□ 1.84
RPUSD1-205ENST00000565377 ACSBG1Q96GR2 724 aa26.52■■□□□ 1.84
RPUSD1-205ENST00000565377 PRIM1P49642 420 aaKnown RBP26.51■■□□□ 1.83
RPUSD1-205ENST00000565377 NFE2L2Q16236 605 aa26.51■■□□□ 1.83
RPUSD1-205ENST00000565377 LMOD3Q0VAK6 560 aa26.5■■□□□ 1.83
RPUSD1-205ENST00000565377 NHSQ6T4R5 1651 aa26.5■■□□□ 1.83
RPUSD1-205ENST00000565377 MPRIPQ6WCQ1 1025 aa26.49■■□□□ 1.83
RPUSD1-205ENST00000565377 TMOD3Q9NYL9 352 aa26.49■■□□□ 1.83
RPUSD1-205ENST00000565377 APBA3O96018 575 aa26.48■■□□□ 1.83
RPUSD1-205ENST00000565377 CABP4P57796 275 aa26.48■■□□□ 1.83
RPUSD1-205ENST00000565377 MIER1Q8N108 512 aa26.48■■□□□ 1.83
RPUSD1-205ENST00000565377 SBF2Q86WG5 1849 aa26.48■■□□□ 1.83
RPUSD1-205ENST00000565377 RNMTO43148 476 aaKnown RBP26.47■■□□□ 1.83
RPUSD1-205ENST00000565377 HMGB2P26583 209 aaKnown RBP26.47■■□□□ 1.83
RPUSD1-205ENST00000565377 CCDC146Q8IYE0 955 aa26.47■■□□□ 1.83
RPUSD1-205ENST00000565377 KCNQ2O43526 872 aa26.46■■□□□ 1.83
RPUSD1-205ENST00000565377 DOT1LQ8TEK3 1739 aa26.45■■□□□ 1.83
RPUSD1-205ENST00000565377 PLSCR1O15162 318 aa26.45■■□□□ 1.82
RPUSD1-205ENST00000565377 FAM9BQ8IZU0 186 aa26.45■■□□□ 1.82
RPUSD1-205ENST00000565377 KDM6AO15550 1401 aaPredicted RBP26.45■■□□□ 1.82
RPUSD1-205ENST00000565377 TMPOP42166 694 aaKnown RBP26.44■■□□□ 1.82
RPUSD1-205ENST00000565377 TEFQ10587 303 aa26.44■■□□□ 1.82
RPUSD1-205ENST00000565377 SMARCC1Q92922 1105 aaPredicted RBP26.44■■□□□ 1.82
RPUSD1-205ENST00000565377 RIPK4P57078 832 aa26.43■■□□□ 1.82
RPUSD1-205ENST00000565377 SLC52A2Q9HAB3 445 aa26.42■■□□□ 1.82
RPUSD1-205ENST00000565377 LGR6Q9HBX8 967 aa26.41■■□□□ 1.82
RPUSD1-205ENST00000565377 KAT6BQ8WYB5 2073 aa26.4■■□□□ 1.82
RPUSD1-205ENST00000565377 TNS1Q9HBL0 1735 aaKnown RBP26.4■■□□□ 1.82
RPUSD1-205ENST00000565377 NCBP3Q53F19 620 aaKnown RBP26.4■■□□□ 1.82
RPUSD1-205ENST00000565377 PIGBQ92521 554 aa26.4■■□□□ 1.82
RPUSD1-205ENST00000565377 CEMIPQ8WUJ3 1361 aa26.4■■□□□ 1.82
RPUSD1-205ENST00000565377 SCN11AQ9UI33 1791 aa26.39■■□□□ 1.82
RPUSD1-205ENST00000565377 NGEFQ8N5V2 710 aa26.39■■□□□ 1.82
RPUSD1-205ENST00000565377 NFATC2IPQ8NCF5 419 aa26.39■■□□□ 1.82
RPUSD1-205ENST00000565377 IL17REQ8NFR9 667 aa26.39■■□□□ 1.82
RPUSD1-205ENST00000565377 ADAMTS7Q9UKP4 1686 aa26.38■■□□□ 1.81
RPUSD1-205ENST00000565377 APAF1O14727 1248 aa26.38■■□□□ 1.81
RPUSD1-205ENST00000565377 TOGARAM1Q9Y4F4 1720 aa26.38■■□□□ 1.81
RPUSD1-205ENST00000565377 MRC1P22897 1456 aa26.37■■□□□ 1.81
RPUSD1-205ENST00000565377 CALD1Q05682 793 aaKnown RBP26.36■■□□□ 1.81
RPUSD1-205ENST00000565377 NEUROD2Q15784 382 aa26.36■■□□□ 1.81
RPUSD1-205ENST00000565377 PTF1AQ7RTS3 328 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms