RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 CSPP1Q1MSJ5 1256 aa6.97□□□□□ -1.29
CAPN3-214ENST00000565274 FHOD3Q2V2M9 1422 aa6.97□□□□□ -1.29
CAPN3-214ENST00000565274 BARGINQ6ZT62 677 aa6.97□□□□□ -1.29
CAPN3-214ENST00000565274 KCTD17Q8N5Z5 321 aa6.97□□□□□ -1.29
CAPN3-214ENST00000565274 FAM174AQ8TBP5 190 aa6.97□□□□□ -1.29
CAPN3-214ENST00000565274 FOXJ1Q92949 421 aa6.97□□□□□ -1.29
CAPN3-214ENST00000565274 PLCD4Q9BRC7 762 aa6.97□□□□□ -1.29
CAPN3-214ENST00000565274 MTMR7Q9Y216 660 aa6.97□□□□□ -1.29
CAPN3-214ENST00000565274 NESP48681 1621 aa6.97□□□□□ -1.29
CAPN3-214ENST00000565274 GAPVD1Q14C86 1478 aa6.97□□□□□ -1.29
CAPN3-214ENST00000565274 CTTNBP2Q8WZ74 1663 aa6.96□□□□□ -1.29
CAPN3-214ENST00000565274 UACAQ9BZF9 1416 aa6.96□□□□□ -1.3
CAPN3-214ENST00000565274 CCER2I3L3R5 266 aa6.96□□□□□ -1.3
CAPN3-214ENST00000565274 ADH1CP00326 375 aa6.96□□□□□ -1.3
CAPN3-214ENST00000565274 TIMP2P16035 220 aa6.96□□□□□ -1.3
CAPN3-214ENST00000565274 AGERQ15109 404 aa6.96□□□□□ -1.3
CAPN3-214ENST00000565274 C6orf118Q5T5N4 469 aa6.96□□□□□ -1.3
CAPN3-214ENST00000565274 TSC1Q92574 1164 aa6.96□□□□□ -1.3
CAPN3-214ENST00000565274 SECISBP2LQ93073 1101 aaKnown RBP6.96□□□□□ -1.3
CAPN3-214ENST00000565274 MAP10Q9P2G4 905 aa6.96□□□□□ -1.3
CAPN3-214ENST00000565274 TCOF1Q13428 1488 aaKnown RBP6.96□□□□□ -1.3
CAPN3-214ENST00000565274 MYOM3Q5VTT5 1437 aa6.95□□□□□ -1.3
CAPN3-214ENST00000565274 CFAP99D6REC4 459 aa6.95□□□□□ -1.3
CAPN3-214ENST00000565274 AMHR2Q16671 573 aa6.95□□□□□ -1.3
CAPN3-214ENST00000565274 DESI1Q6ICB0 168 aa6.95□□□□□ -1.3
CAPN3-214ENST00000565274 RSBN1LQ6PCB5 846 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-214ENST00000565274 LYPD8Q6UX82 237 aa6.95□□□□□ -1.3
CAPN3-214ENST00000565274 NPAS3Q8IXF0 933 aa6.95□□□□□ -1.3
CAPN3-214ENST00000565274 ZFAND3Q9H8U3 227 aa6.95□□□□□ -1.3
CAPN3-214ENST00000565274 CCDC18Q5T9S5 1454 aa6.94□□□□□ -1.3
CAPN3-214ENST00000565274 ZMYND10O75800 440 aa6.94□□□□□ -1.3
CAPN3-214ENST00000565274 ZIC2O95409 532 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-214ENST00000565274 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-214ENST00000565274 SETQ01105 290 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-214ENST00000565274 CABLES1Q8TDN4 633 aa6.94□□□□□ -1.3
CAPN3-214ENST00000565274 KIF21AQ7Z4S6 1674 aa6.93□□□□□ -1.3
CAPN3-214ENST00000565274 MIA2Q96PC5 1412 aa6.93□□□□□ -1.3
CAPN3-214ENST00000565274 EHBP1L1Q8N3D4 1523 aa6.93□□□□□ -1.3
CAPN3-214ENST00000565274 MPNDQ8N594 471 aa6.93□□□□□ -1.3
CAPN3-214ENST00000565274 ZC3H15Q8WU90 426 aaKnown RBP6.93□□□□□ -1.3
CAPN3-214ENST00000565274 TARBP1Q13395 1621 aaKnown RBP6.93□□□□□ -1.3
CAPN3-214ENST00000565274 MTUS2Q5JR59 1369 aa6.93□□□□□ -1.3
CAPN3-214ENST00000565274 NAIPQ13075 1403 aa6.93□□□□□ -1.3
CAPN3-214ENST00000565274 NCOA2Q15596 1464 aa6.92□□□□□ -1.3
CAPN3-214ENST00000565274 UGGT2Q9NYU1 1516 aa6.92□□□□□ -1.3
CAPN3-214ENST00000565274 MAN1A2O60476 641 aa6.92□□□□□ -1.3
CAPN3-214ENST00000565274 RBM25P49756 843 aaKnown RBP6.92□□□□□ -1.3
CAPN3-214ENST00000565274 FAM50AQ14320 339 aaKnown RBP6.92□□□□□ -1.3
CAPN3-214ENST00000565274 CCDC27Q2M243 656 aa6.92□□□□□ -1.3
CAPN3-214ENST00000565274 FOXD4L5Q5VV16 416 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-214ENST00000565274 RIC3Q7Z5B4 369 aa6.92□□□□□ -1.3
CAPN3-214ENST00000565274 FOXD4L4Q8WXT5 416 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-214ENST00000565274 ITPKCQ96DU7 683 aa6.92□□□□□ -1.3
CAPN3-214ENST00000565274 ZBTB3Q9H5J0 574 aa6.92□□□□□ -1.3
CAPN3-214ENST00000565274 KCNG1Q9UIX4 513 aa6.92□□□□□ -1.3
CAPN3-214ENST00000565274 PTPRKQ15262 1439 aa6.92□□□□□ -1.3
CAPN3-214ENST00000565274 PER1O15534 1290 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-214ENST00000565274 NR3C2P08235 984 aa6.91□□□□□ -1.3
CAPN3-214ENST00000565274 DIXDC1Q155Q3 683 aa6.91□□□□□ -1.3
CAPN3-214ENST00000565274 PARP9Q8IXQ6 854 aa6.91□□□□□ -1.3
CAPN3-214ENST00000565274 KLF16Q9BXK1 252 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-214ENST00000565274 ARID4BQ4LE39 1312 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-214ENST00000565274 TDRD9Q8NDG6 1382 aaKnown RBP6.91□□□□□ -1.3
CAPN3-214ENST00000565274 PTPN23Q9H3S7 1636 aa6.9□□□□□ -1.3
CAPN3-214ENST00000565274 NUTM2BA6NNL0 878 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-214ENST00000565274 NUTM2EB1AL46 878 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-214ENST00000565274 SPTLC1O15269 473 aa6.9□□□□□ -1.3
CAPN3-214ENST00000565274 MAFGO15525 162 aa6.9□□□□□ -1.3
CAPN3-214ENST00000565274 BMP2P12643 396 aa6.9□□□□□ -1.3
CAPN3-214ENST00000565274 MCCP23508 829 aa6.9□□□□□ -1.3
CAPN3-214ENST00000565274 ITGAEP38570 1179 aa6.9□□□□□ -1.3
CAPN3-214ENST00000565274 C4orf48Q5BLP8 95 aa6.9□□□□□ -1.3
CAPN3-214ENST00000565274 NUTM2DQ5VT03 806 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-214ENST00000565274 NUTM2AQ8IVF1 878 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-214ENST00000565274 CDK15Q96Q40 435 aa6.9□□□□□ -1.3
CAPN3-214ENST00000565274 SIN3AQ96ST3 1273 aa6.9□□□□□ -1.3
CAPN3-214ENST00000565274 SUPT6HQ7KZ85 1726 aaKnown RBP6.9□□□□□ -1.31
CAPN3-214ENST00000565274 F12P00748 615 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-214ENST00000565274 FAM43BQ6ZT52 329 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-214ENST00000565274 WWC1Q8IX03 1113 aa6.89□□□□□ -1.31
CAPN3-214ENST00000565274 USP35Q9P2H5 1018 aa6.89□□□□□ -1.31
CAPN3-214ENST00000565274 ROCK1Q13464 1354 aa6.89□□□□□ -1.31
CAPN3-214ENST00000565274 KDM5BQ9UGL1 1544 aa6.89□□□□□ -1.31
CAPN3-214ENST00000565274 TRIM66O15016 1216 aa6.88□□□□□ -1.31
CAPN3-214ENST00000565274 UPP2O95045 317 aa6.88□□□□□ -1.31
CAPN3-214ENST00000565274 GJA5P36382 358 aa6.88□□□□□ -1.31
CAPN3-214ENST00000565274 NR5A1Q13285 461 aa6.88□□□□□ -1.31
CAPN3-214ENST00000565274 BPHLQ86WA6 291 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-214ENST00000565274 FTSJ3Q8IY81 847 aaKnown RBP6.88□□□□□ -1.31
CAPN3-214ENST00000565274 ZNF526Q8TF50 670 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-214ENST00000565274 HECW1Q76N89 1606 aa6.87□□□□□ -1.31
CAPN3-214ENST00000565274 MRC2Q9UBG0 1479 aa6.87□□□□□ -1.31
CAPN3-214ENST00000565274 PPM1GO15355 546 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-214ENST00000565274 GRM5P41594 1212 aa6.87□□□□□ -1.31
CAPN3-214ENST00000565274 ANAPC15P60006 121 aa6.87□□□□□ -1.31
CAPN3-214ENST00000565274 LIMD1Q9UGP4 676 aa6.87□□□□□ -1.31
CAPN3-214ENST00000565274 EPRSP07814 1512 aaKnown RBP6.86□□□□□ -1.31
CAPN3-214ENST00000565274 KIAA0586Q9BVV6 1533 aa6.86□□□□□ -1.31
CAPN3-214ENST00000565274 ERCC6Q03468 1493 aa6.86□□□□□ -1.31
CAPN3-214ENST00000565274 IFT140Q96RY7 1462 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms