RNA–Protein interactions for RNA: ENST00000565167.1

RPAP1-208, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 1,712 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-208ENST00000565167 PLEKHO1Q53GL0 409 aaPredicted RBP18.54■□□□□ 0.56
RPAP1-208ENST00000565167 MCM10Q7L590 875 aa18.54■□□□□ 0.56
RPAP1-208ENST00000565167 RTF1Q92541 710 aaKnown RBP18.54■□□□□ 0.56
RPAP1-208ENST00000565167 CFAP44Q96MT7 982 aa18.54■□□□□ 0.56
RPAP1-208ENST00000565167 LAS1LQ9Y4W2 734 aaKnown RBP18.54■□□□□ 0.56
RPAP1-208ENST00000565167 RRP1P56182 461 aaKnown RBP18.53■□□□□ 0.56
RPAP1-208ENST00000565167 AMOTQ4VCS5 1084 aa18.53■□□□□ 0.56
RPAP1-208ENST00000565167 EXOSC9Q06265 439 aaKnown RBP18.52■□□□□ 0.56
RPAP1-208ENST00000565167 WDR17Q8IZU2 1322 aa18.52■□□□□ 0.56
RPAP1-208ENST00000565167 CT47B1P0C2W7 299 aaPredicted RBP18.51■□□□□ 0.55
RPAP1-208ENST00000565167 RAPGEF4Q8WZA2 1011 aa18.51■□□□□ 0.55
RPAP1-208ENST00000565167 MAP3K5Q99683 1374 aa18.51■□□□□ 0.55
RPAP1-208ENST00000565167 COL5A2P05997 1499 aaPredicted RBP18.5■□□□□ 0.55
RPAP1-208ENST00000565167 CHL1O00533 1208 aa18.49■□□□□ 0.55
RPAP1-208ENST00000565167 EVA1CP58658 441 aa18.49■□□□□ 0.55
RPAP1-208ENST00000565167 ERICH6BQ5W0A0 696 aa18.49■□□□□ 0.55
RPAP1-208ENST00000565167 IL17REQ8NFR9 667 aa18.49■□□□□ 0.55
RPAP1-208ENST00000565167 MBIPQ9NS73 344 aa18.49■□□□□ 0.55
RPAP1-208ENST00000565167 CRB1P82279 1406 aa18.49■□□□□ 0.55
RPAP1-208ENST00000565167 TOM1L2Q6ZVM7 507 aa18.49■□□□□ 0.55
RPAP1-208ENST00000565167 TATP17735 454 aaPredicted RBP18.48■□□□□ 0.55
RPAP1-208ENST00000565167 RARSP54136 660 aaKnown RBP18.48■□□□□ 0.55
RPAP1-208ENST00000565167 AKAP4Q5JQC9 854 aa18.48■□□□□ 0.55
RPAP1-208ENST00000565167 ZNF530Q6P9A1 599 aaPredicted RBP18.48■□□□□ 0.55
RPAP1-208ENST00000565167 BCAR3O75815 825 aa18.47■□□□□ 0.55
RPAP1-208ENST00000565167 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
RPAP1-208ENST00000565167 BTG4Q9NY30 223 aa18.47■□□□□ 0.55
RPAP1-208ENST00000565167 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.47■□□□□ 0.55
RPAP1-208ENST00000565167 JCADQ9P266 1359 aa18.46■□□□□ 0.55
RPAP1-208ENST00000565167 PLIN1O60240 522 aa18.46■□□□□ 0.55
RPAP1-208ENST00000565167 CARD10Q9BWT7 1032 aa18.46■□□□□ 0.55
RPAP1-208ENST00000565167 STRN4Q9NRL3 753 aa18.46■□□□□ 0.55
RPAP1-208ENST00000565167 PLEKHG2Q9H7P9 1386 aa18.46■□□□□ 0.55
RPAP1-208ENST00000565167 LARP1Q6PKG0 1096 aaKnown RBP18.46■□□□□ 0.55
RPAP1-208ENST00000565167 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.46■□□□□ 0.55
RPAP1-208ENST00000565167 C1orf141Q5JVX7 400 aa18.45■□□□□ 0.54
RPAP1-208ENST00000565167 SPG7Q9UQ90 795 aa18.45■□□□□ 0.54
RPAP1-208ENST00000565167 MEGF6O75095 1541 aa18.44■□□□□ 0.54
RPAP1-208ENST00000565167 ADAMTS2O95450 1211 aa18.43■□□□□ 0.54
RPAP1-208ENST00000565167 LGR6Q9HBX8 967 aa18.43■□□□□ 0.54
RPAP1-208ENST00000565167 CEMIPQ8WUJ3 1361 aa18.43■□□□□ 0.54
RPAP1-208ENST00000565167 NUTM2BA6NNL0 878 aaPredicted RBP18.43■□□□□ 0.54
RPAP1-208ENST00000565167 NUTM2EB1AL46 878 aaPredicted RBP18.43■□□□□ 0.54
RPAP1-208ENST00000565167 TAF7Q15545 349 aaPredicted RBP18.43■□□□□ 0.54
RPAP1-208ENST00000565167 NUTM2AQ8IVF1 878 aaPredicted RBP18.43■□□□□ 0.54
RPAP1-208ENST00000565167 LRRC37A3O60309 1634 aa18.42■□□□□ 0.54
RPAP1-208ENST00000565167 VAMP4O75379 141 aa18.42■□□□□ 0.54
RPAP1-208ENST00000565167 MPRIPQ6WCQ1 1025 aa18.42■□□□□ 0.54
RPAP1-208ENST00000565167 C8orf58Q8NAV2 365 aa18.42■□□□□ 0.54
RPAP1-208ENST00000565167 ZNF428Q96B54 188 aa18.42■□□□□ 0.54
RPAP1-208ENST00000565167 MIS18AQ9NYP9 233 aa18.42■□□□□ 0.54
RPAP1-208ENST00000565167 TSPYL6Q8N831 410 aa18.41■□□□□ 0.54
RPAP1-208ENST00000565167 BABAM1Q9NWV8 329 aa18.41■□□□□ 0.54
RPAP1-208ENST00000565167 RNMTO43148 476 aaKnown RBP18.4■□□□□ 0.54
RPAP1-208ENST00000565167 TSPYL4Q9UJ04 414 aa18.4■□□□□ 0.54
RPAP1-208ENST00000565167 ELL2O00472 640 aaPredicted RBP18.4■□□□□ 0.54
RPAP1-208ENST00000565167 TWISTNBQ3B726 338 aaPredicted RBP18.4■□□□□ 0.54
RPAP1-208ENST00000565167 IFNL2Q8IZJ0 200 aa18.4■□□□□ 0.54
RPAP1-208ENST00000565167 SPATA31A6Q5VVP1 1343 aa18.39■□□□□ 0.53
RPAP1-208ENST00000565167 IL2RBP14784 551 aa18.39■□□□□ 0.53
RPAP1-208ENST00000565167 PHKG2P15735 406 aa18.39■□□□□ 0.53
RPAP1-208ENST00000565167 ALDH1L2Q3SY69 923 aa18.39■□□□□ 0.53
RPAP1-208ENST00000565167 SSH1Q8WYL5 1049 aa18.39■□□□□ 0.53
RPAP1-208ENST00000565167 VIRMAQ69YN4 1812 aaKnown RBP18.39■□□□□ 0.53
RPAP1-208ENST00000565167 OVOS2A0A0G2JMS6 1433 aa18.38■□□□□ 0.53
RPAP1-208ENST00000565167 PKD1L3Q7Z443 1732 aa18.38■□□□□ 0.53
RPAP1-208ENST00000565167 BCL2L13Q9BXK5 485 aa18.38■□□□□ 0.53
RPAP1-208ENST00000565167 TEFQ10587 303 aa18.37■□□□□ 0.53
RPAP1-208ENST00000565167 C20orf194Q5TEA3 1177 aa18.37■□□□□ 0.53
RPAP1-208ENST00000565167 ZCRB1Q8TBF4 217 aaKnown RBP18.37■□□□□ 0.53
RPAP1-208ENST00000565167 PPP4R2Q9NY27 417 aa18.37■□□□□ 0.53
RPAP1-208ENST00000565167 PARP4Q9UKK3 1724 aaKnown RBP18.37■□□□□ 0.53
RPAP1-208ENST00000565167 CYP27B1O15528 508 aa18.37■□□□□ 0.53
RPAP1-208ENST00000565167 SMC4Q9NTJ3 1288 aa18.37■□□□□ 0.53
RPAP1-208ENST00000565167 PLCH1Q4KWH8 1693 aa18.36■□□□□ 0.53
RPAP1-208ENST00000565167 EXOC6Q8TAG9 804 aa18.36■□□□□ 0.53
RPAP1-208ENST00000565167 FRAT1Q92837 279 aaPredicted RBP18.36■□□□□ 0.53
RPAP1-208ENST00000565167 USP35Q9P2H5 1018 aa18.36■□□□□ 0.53
RPAP1-208ENST00000565167 ADAMTS7Q9UKP4 1686 aa18.36■□□□□ 0.53
RPAP1-208ENST00000565167 PDE3AQ14432 1141 aa18.35■□□□□ 0.53
RPAP1-208ENST00000565167 KRT24Q2M2I5 525 aa18.35■□□□□ 0.53
RPAP1-208ENST00000565167 CANXP27824 592 aaKnown RBP18.35■□□□□ 0.53
RPAP1-208ENST00000565167 BRPF1P55201 1214 aaPredicted RBP18.35■□□□□ 0.53
RPAP1-208ENST00000565167 SCN11AQ9UI33 1791 aa18.34■□□□□ 0.53
RPAP1-208ENST00000565167 HSP90AB1P08238 724 aaKnown RBP18.34■□□□□ 0.53
RPAP1-208ENST00000565167 DCAF5Q96JK2 942 aa18.33■□□□□ 0.52
RPAP1-208ENST00000565167 CRBNQ96SW2 442 aa18.33■□□□□ 0.52
RPAP1-208ENST00000565167 PCDH11XQ9BZA7 1347 aa18.33■□□□□ 0.52
RPAP1-208ENST00000565167 PCDH11YQ9BZA8 1340 aa18.33■□□□□ 0.52
RPAP1-208ENST00000565167 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
RPAP1-208ENST00000565167 SLIT2O94813 1529 aa18.32■□□□□ 0.52
RPAP1-208ENST00000565167 LRP6O75581 1613 aa18.32■□□□□ 0.52
RPAP1-208ENST00000565167 KDM6AO15550 1401 aaPredicted RBP18.32■□□□□ 0.52
RPAP1-208ENST00000565167 NRAPQ86VF7 1730 aa18.32■□□□□ 0.52
RPAP1-208ENST00000565167 NWD2Q9ULI1 1742 aa18.32■□□□□ 0.52
RPAP1-208ENST00000565167 ZKSCAN2Q63HK3 967 aa18.32■□□□□ 0.52
RPAP1-208ENST00000565167 MRPL50Q8N5N7 158 aaKnown RBP18.32■□□□□ 0.52
RPAP1-208ENST00000565167 SLC52A2Q9HAB3 445 aa18.31■□□□□ 0.52
RPAP1-208ENST00000565167 NOB1Q9ULX3 412 aaKnown RBP18.31■□□□□ 0.52
RPAP1-208ENST00000565167 SIPA1L3O60292 1781 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms