RNA–Protein interactions for RNA: ENST00000565034.1

NIP7-206, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-206ENST00000565034 AXIN2Q9Y2T1 843 aa18.91■□□□□ 0.62
NIP7-206ENST00000565034 KIAA0232Q92628 1395 aa18.91■□□□□ 0.62
NIP7-206ENST00000565034 CANXP27824 592 aaKnown RBP18.9■□□□□ 0.62
NIP7-206ENST00000565034 DCTN1Q14203 1278 aa18.9■□□□□ 0.62
NIP7-206ENST00000565034 ALDH1L2Q3SY69 923 aa18.9■□□□□ 0.62
NIP7-206ENST00000565034 AMOTQ4VCS5 1084 aa18.9■□□□□ 0.62
NIP7-206ENST00000565034 CABLES1Q8TDN4 633 aa18.9■□□□□ 0.62
NIP7-206ENST00000565034 LRRC59Q96AG4 307 aaKnown RBP18.9■□□□□ 0.62
NIP7-206ENST00000565034 CRBNQ96SW2 442 aa18.9■□□□□ 0.62
NIP7-206ENST00000565034 COL22A1Q8NFW1 1626 aaPredicted RBP18.89■□□□□ 0.62
NIP7-206ENST00000565034 CHL1O00533 1208 aa18.89■□□□□ 0.61
NIP7-206ENST00000565034 HAP1P54257 671 aaPredicted RBP18.89■□□□□ 0.61
NIP7-206ENST00000565034 PLEKHO1Q53GL0 409 aaPredicted RBP18.89■□□□□ 0.61
NIP7-206ENST00000565034 MCM10Q7L590 875 aa18.89■□□□□ 0.61
NIP7-206ENST00000565034 CCDC136Q96JN2 1154 aa18.89■□□□□ 0.61
NIP7-206ENST00000565034 MS4A1P11836 297 aa18.88■□□□□ 0.61
NIP7-206ENST00000565034 C20orf194Q5TEA3 1177 aa18.87■□□□□ 0.61
NIP7-206ENST00000565034 B4GALNT3Q6L9W6 998 aa18.87■□□□□ 0.61
NIP7-206ENST00000565034 SMC4Q9NTJ3 1288 aa18.87■□□□□ 0.61
NIP7-206ENST00000565034 BABAM1Q9NWV8 329 aa18.87■□□□□ 0.61
NIP7-206ENST00000565034 OVOS2A0A0G2JMS6 1433 aa18.86■□□□□ 0.61
NIP7-206ENST00000565034 KIF16BQ96L93 1317 aa18.86■□□□□ 0.61
NIP7-206ENST00000565034 BRPF1P55201 1214 aaPredicted RBP18.86■□□□□ 0.61
NIP7-206ENST00000565034 ZKSCAN2Q63HK3 967 aa18.85■□□□□ 0.61
NIP7-206ENST00000565034 SSH1Q8WYL5 1049 aa18.85■□□□□ 0.61
NIP7-206ENST00000565034 PRDM11Q9NQV5 511 aa18.85■□□□□ 0.61
NIP7-206ENST00000565034 VIRMAQ69YN4 1812 aaKnown RBP18.85■□□□□ 0.61
NIP7-206ENST00000565034 VAMP4O75379 141 aa18.84■□□□□ 0.61
NIP7-206ENST00000565034 AKAP4Q5JQC9 854 aa18.84■□□□□ 0.61
NIP7-206ENST00000565034 FRAT1Q92837 279 aaPredicted RBP18.84■□□□□ 0.61
NIP7-206ENST00000565034 ADAMTS7Q9UKP4 1686 aa18.84■□□□□ 0.61
NIP7-206ENST00000565034 PHLPP1O60346 1717 aa18.83■□□□□ 0.61
NIP7-206ENST00000565034 PKD1L3Q7Z443 1732 aa18.83■□□□□ 0.61
NIP7-206ENST00000565034 CEMIPQ8WUJ3 1361 aa18.83■□□□□ 0.61
NIP7-206ENST00000565034 IPO8O15397 1037 aaKnown RBP18.83■□□□□ 0.6
NIP7-206ENST00000565034 CSB-PGBD3P0DP91 1061 aa18.83■□□□□ 0.6
NIP7-206ENST00000565034 AAMPQ13685 434 aa18.83■□□□□ 0.6
NIP7-206ENST00000565034 CHRNA2Q15822 529 aa18.83■□□□□ 0.6
NIP7-206ENST00000565034 TWISTNBQ3B726 338 aaPredicted RBP18.83■□□□□ 0.6
NIP7-206ENST00000565034 BCL2L13Q9BXK5 485 aa18.83■□□□□ 0.6
NIP7-206ENST00000565034 NLRP2Q9NX02 1062 aa18.83■□□□□ 0.6
NIP7-206ENST00000565034 PARP4Q9UKK3 1724 aaKnown RBP18.83■□□□□ 0.6
NIP7-206ENST00000565034 ZNF530Q6P9A1 599 aaPredicted RBP18.82■□□□□ 0.6
NIP7-206ENST00000565034 RAPGEF4Q8WZA2 1011 aa18.82■□□□□ 0.6
NIP7-206ENST00000565034 COL14A1Q05707 1796 aaKnown RBP18.81■□□□□ 0.6
NIP7-206ENST00000565034 SOS1Q07889 1333 aaPredicted RBP18.81■□□□□ 0.6
NIP7-206ENST00000565034 TATP17735 454 aaPredicted RBP18.81■□□□□ 0.6
NIP7-206ENST00000565034 C1orf141Q5JVX7 400 aa18.81■□□□□ 0.6
NIP7-206ENST00000565034 IL17REQ8NFR9 667 aa18.81■□□□□ 0.6
NIP7-206ENST00000565034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.81■□□□□ 0.6
NIP7-206ENST00000565034 COL5A2P05997 1499 aaPredicted RBP18.81■□□□□ 0.6
NIP7-206ENST00000565034 COL16A1Q07092 1604 aaPredicted RBP18.81■□□□□ 0.6
NIP7-206ENST00000565034 KDM3BQ7LBC6 1761 aa18.81■□□□□ 0.6
NIP7-206ENST00000565034 WDR17Q8IZU2 1322 aa18.8■□□□□ 0.6
NIP7-206ENST00000565034 C8orf58Q8NAV2 365 aa18.8■□□□□ 0.6
NIP7-206ENST00000565034 TSPYL4Q9UJ04 414 aa18.8■□□□□ 0.6
NIP7-206ENST00000565034 TOM1O60784 492 aa18.79■□□□□ 0.6
NIP7-206ENST00000565034 TAF7Q15545 349 aaPredicted RBP18.79■□□□□ 0.6
NIP7-206ENST00000565034 TSPYL6Q8N831 410 aa18.79■□□□□ 0.6
NIP7-206ENST00000565034 ATF7IPQ6VMQ6 1270 aa18.78■□□□□ 0.6
NIP7-206ENST00000565034 DZIP1LQ8IYY4 767 aaKnown RBP18.78■□□□□ 0.6
NIP7-206ENST00000565034 MRPL50Q8N5N7 158 aaKnown RBP18.78■□□□□ 0.6
NIP7-206ENST00000565034 ARHGAP45Q92619 1136 aa18.78■□□□□ 0.6
NIP7-206ENST00000565034 SPG7Q9UQ90 795 aa18.78■□□□□ 0.6
NIP7-206ENST00000565034 MEGF6O75095 1541 aa18.78■□□□□ 0.6
NIP7-206ENST00000565034 SIPA1L3O60292 1781 aaPredicted RBP18.78■□□□□ 0.6
NIP7-206ENST00000565034 PANK1Q8TE04 598 aa18.77■□□□□ 0.6
NIP7-206ENST00000565034 SCN11AQ9UI33 1791 aa18.77■□□□□ 0.6
NIP7-206ENST00000565034 FTSJ3Q8IY81 847 aaKnown RBP18.76■□□□□ 0.59
NIP7-206ENST00000565034 NOB1Q9ULX3 412 aaKnown RBP18.76■□□□□ 0.59
NIP7-206ENST00000565034 COG6Q9Y2V7 657 aa18.75■□□□□ 0.59
NIP7-206ENST00000565034 CACNA1FO60840 1977 aa18.74■□□□□ 0.59
NIP7-206ENST00000565034 ELL2O00472 640 aaPredicted RBP18.74■□□□□ 0.59
NIP7-206ENST00000565034 RNMTO43148 476 aaKnown RBP18.74■□□□□ 0.59
NIP7-206ENST00000565034 TRIM27P14373 513 aa18.74■□□□□ 0.59
NIP7-206ENST00000565034 TEFQ10587 303 aa18.74■□□□□ 0.59
NIP7-206ENST00000565034 MVPQ14764 893 aaKnown RBP18.74■□□□□ 0.59
NIP7-206ENST00000565034 CARD10Q9BWT7 1032 aa18.74■□□□□ 0.59
NIP7-206ENST00000565034 RLBP1P12271 317 aa18.73■□□□□ 0.59
NIP7-206ENST00000565034 TOM1L2Q6ZVM7 507 aa18.72■□□□□ 0.59
NIP7-206ENST00000565034 CLUAP1Q96AJ1 413 aa18.72■□□□□ 0.59
NIP7-206ENST00000565034 API5Q9BZZ5 524 aaKnown RBP18.72■□□□□ 0.59
NIP7-206ENST00000565034 HSP90AB1P08238 724 aaKnown RBP18.71■□□□□ 0.59
NIP7-206ENST00000565034 CHMP4AQ9BY43 222 aa18.71■□□□□ 0.59
NIP7-206ENST00000565034 LGR6Q9HBX8 967 aa18.71■□□□□ 0.59
NIP7-206ENST00000565034 MIS18AQ9NYP9 233 aa18.71■□□□□ 0.59
NIP7-206ENST00000565034 DDX19BQ9UMR2 479 aa18.71■□□□□ 0.59
NIP7-206ENST00000565034 TNNQ9UQP3 1299 aa18.71■□□□□ 0.59
NIP7-206ENST00000565034 MRC1P22897 1456 aa18.71■□□□□ 0.59
NIP7-206ENST00000565034 PLCH1Q4KWH8 1693 aa18.7■□□□□ 0.58
NIP7-206ENST00000565034 PHKG2P15735 406 aa18.7■□□□□ 0.58
NIP7-206ENST00000565034 EVA1CP58658 441 aa18.7■□□□□ 0.58
NIP7-206ENST00000565034 MPRIPQ6WCQ1 1025 aa18.7■□□□□ 0.58
NIP7-206ENST00000565034 CENPQQ7L2Z9 268 aaPredicted RBP18.7■□□□□ 0.58
NIP7-206ENST00000565034 IFNL2Q8IZJ0 200 aa18.7■□□□□ 0.58
NIP7-206ENST00000565034 CHMP4BQ9H444 224 aaKnown RBP18.7■□□□□ 0.58
NIP7-206ENST00000565034 HOXB7P09629 217 aa18.69■□□□□ 0.58
NIP7-206ENST00000565034 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
NIP7-206ENST00000565034 AEBP2Q6ZN18 517 aaPredicted RBP18.68■□□□□ 0.58
NIP7-206ENST00000565034 ABCC4O15439 1325 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms