RNA–Protein interactions for RNA: ENST00000564973.1

ATP6V0C-202, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

TSL 2 BASIC

Gene ATP6V0C, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-202ENST00000564973 OVOS2A0A0G2JMS6 1433 aa23.55■■□□□ 1.36
ATP6V0C-202ENST00000564973 RGPD2P0DJD1 1756 aa23.55■■□□□ 1.36
ATP6V0C-202ENST00000564973 WNK3Q9BYP7 1800 aa23.54■■□□□ 1.36
ATP6V0C-202ENST00000564973 KDRP35968 1356 aa23.54■■□□□ 1.36
ATP6V0C-202ENST00000564973 WDR43Q15061 677 aaKnown RBP eCLIP23.54■■□□□ 1.36
ATP6V0C-202ENST00000564973 DIEXFQ68CQ4 756 aaKnown RBP23.54■■□□□ 1.36
ATP6V0C-202ENST00000564973 CCDC125Q86Z20 511 aa23.54■■□□□ 1.36
ATP6V0C-202ENST00000564973 PCDH11XQ9BZA7 1347 aa23.54■■□□□ 1.36
ATP6V0C-202ENST00000564973 PCDH11YQ9BZA8 1340 aa23.54■■□□□ 1.36
ATP6V0C-202ENST00000564973 TNS2Q63HR2 1409 aa23.53■■□□□ 1.36
ATP6V0C-202ENST00000564973 COL3A1P02461 1466 aaPredicted RBP23.53■■□□□ 1.36
ATP6V0C-202ENST00000564973 HSP90AB1P08238 724 aaKnown RBP23.52■■□□□ 1.36
ATP6V0C-202ENST00000564973 ILDR2Q71H61 639 aa23.51■■□□□ 1.35
ATP6V0C-202ENST00000564973 HMOX1P09601 288 aa23.5■■□□□ 1.35
ATP6V0C-202ENST00000564973 DDX54Q8TDD1 881 aaKnown RBP23.5■■□□□ 1.35
ATP6V0C-202ENST00000564973 SF3B2Q13435 895 aaKnown RBP23.49■■□□□ 1.35
ATP6V0C-202ENST00000564973 C1orf141Q5JVX7 400 aa23.49■■□□□ 1.35
ATP6V0C-202ENST00000564973 IFNL2Q8IZJ0 200 aa23.49■■□□□ 1.35
ATP6V0C-202ENST00000564973 RGPD1P0DJD0 1748 aa23.49■■□□□ 1.35
ATP6V0C-202ENST00000564973 MEGF6O75095 1541 aa23.48■■□□□ 1.35
ATP6V0C-202ENST00000564973 LRRC37A3O60309 1634 aa23.48■■□□□ 1.35
ATP6V0C-202ENST00000564973 BRWD3Q6RI45 1802 aa23.47■■□□□ 1.35
ATP6V0C-202ENST00000564973 GAS2L2Q8NHY3 880 aa23.47■■□□□ 1.35
ATP6V0C-202ENST00000564973 BCL9O00512 1426 aa23.47■■□□□ 1.35
ATP6V0C-202ENST00000564973 MARCH10Q8NA82 808 aaPredicted RBP23.46■■□□□ 1.35
ATP6V0C-202ENST00000564973 AEBP1Q8IUX7 1158 aa23.45■■□□□ 1.34
ATP6V0C-202ENST00000564973 MRS2Q9HD23 443 aa23.45■■□□□ 1.34
ATP6V0C-202ENST00000564973 MAPK8IP3Q9UPT6 1336 aa23.44■■□□□ 1.34
ATP6V0C-202ENST00000564973 PRKAR2BP31323 418 aa23.43■■□□□ 1.34
ATP6V0C-202ENST00000564973 RSPH6AQ9H0K4 717 aa23.43■■□□□ 1.34
ATP6V0C-202ENST00000564973 HMGB2P26583 209 aaKnown RBP23.42■■□□□ 1.34
ATP6V0C-202ENST00000564973 AKAP4Q5JQC9 854 aa23.42■■□□□ 1.34
ATP6V0C-202ENST00000564973 ZNF530Q6P9A1 599 aaPredicted RBP23.42■■□□□ 1.34
ATP6V0C-202ENST00000564973 CCER2I3L3R5 266 aa23.41■■□□□ 1.34
ATP6V0C-202ENST00000564973 NKX1-1Q15270 411 aaPredicted RBP23.41■■□□□ 1.34
ATP6V0C-202ENST00000564973 PKD1L3Q7Z443 1732 aa23.4■■□□□ 1.34
ATP6V0C-202ENST00000564973 PHKG2P15735 406 aa23.4■■□□□ 1.34
ATP6V0C-202ENST00000564973 DCAF5Q96JK2 942 aa23.4■■□□□ 1.34
ATP6V0C-202ENST00000564973 BCL11BQ9C0K0 894 aaPredicted RBP23.39■■□□□ 1.33
ATP6V0C-202ENST00000564973 SOCS7O14512 581 aa23.38■■□□□ 1.33
ATP6V0C-202ENST00000564973 CYP27B1O15528 508 aa23.37■■□□□ 1.33
ATP6V0C-202ENST00000564973 ERVV-2B6SEH9 535 aa23.36■■□□□ 1.33
ATP6V0C-202ENST00000564973 HTATSF1O43719 755 aaKnown RBP23.36■■□□□ 1.33
ATP6V0C-202ENST00000564973 MTHFSDQ2M296 383 aaKnown RBP23.36■■□□□ 1.33
ATP6V0C-202ENST00000564973 FAM182BQ5T319 152 aa23.36■■□□□ 1.33
ATP6V0C-202ENST00000564973 RTF1Q92541 710 aaKnown RBP23.36■■□□□ 1.33
ATP6V0C-202ENST00000564973 RUNDC1Q96C34 613 aa23.36■■□□□ 1.33
ATP6V0C-202ENST00000564973 GNAT3A8MTJ3 354 aa23.35■■□□□ 1.33
ATP6V0C-202ENST00000564973 BAG6P46379 1132 aa23.35■■□□□ 1.33
ATP6V0C-202ENST00000564973 UPF1Q92900 1129 aaKnown RBP eCLIP23.35■■□□□ 1.331e-16■■■■■ 39.5
ATP6V0C-202ENST00000564973 ADAMTS8Q9UP79 889 aa23.35■■□□□ 1.33
ATP6V0C-202ENST00000564973 TRIM37O94972 964 aa23.34■■□□□ 1.33
ATP6V0C-202ENST00000564973 PNISRQ8TF01 805 aaKnown RBP23.34■■□□□ 1.33
ATP6V0C-202ENST00000564973 LMOD3Q0VAK6 560 aa23.33■■□□□ 1.33
ATP6V0C-202ENST00000564973 SYTL4Q96C24 671 aaPredicted RBP23.32■■□□□ 1.32
ATP6V0C-202ENST00000564973 PLEKHF1Q96S99 279 aa23.32■■□□□ 1.32
ATP6V0C-202ENST00000564973 TMOD3Q9NYL9 352 aa23.31■■□□□ 1.32
ATP6V0C-202ENST00000564973 KAT6BQ8WYB5 2073 aa23.31■■□□□ 1.32
ATP6V0C-202ENST00000564973 APBA3O96018 575 aa23.3■■□□□ 1.32
ATP6V0C-202ENST00000564973 PRIM1P49642 420 aaKnown RBP23.3■■□□□ 1.32
ATP6V0C-202ENST00000564973 CABP4P57796 275 aa23.3■■□□□ 1.32
ATP6V0C-202ENST00000564973 PHACTR3Q96KR7 559 aa23.3■■□□□ 1.32
ATP6V0C-202ENST00000564973 SHANK3Q9BYB0 1731 aa23.3■■□□□ 1.32
ATP6V0C-202ENST00000564973 MAP3K5Q99683 1374 aa23.29■■□□□ 1.32
ATP6V0C-202ENST00000564973 NFE2L2Q16236 605 aa23.29■■□□□ 1.32
ATP6V0C-202ENST00000564973 SMARCC1Q92922 1105 aaPredicted RBP23.29■■□□□ 1.32
ATP6V0C-202ENST00000564973 ACSBG1Q96GR2 724 aa23.29■■□□□ 1.32
ATP6V0C-202ENST00000564973 PLSCR1O15162 318 aa23.28■■□□□ 1.32
ATP6V0C-202ENST00000564973 MPRIPQ6WCQ1 1025 aa23.27■■□□□ 1.32
ATP6V0C-202ENST00000564973 SBF2Q86WG5 1849 aa23.26■■□□□ 1.31
ATP6V0C-202ENST00000564973 TEFQ10587 303 aa23.26■■□□□ 1.31
ATP6V0C-202ENST00000564973 NGEFQ8N5V2 710 aa23.26■■□□□ 1.31
ATP6V0C-202ENST00000564973 RNMTO43148 476 aaKnown RBP23.25■■□□□ 1.31
ATP6V0C-202ENST00000564973 CCDC184Q52MB2 194 aa23.25■■□□□ 1.31
ATP6V0C-202ENST00000564973 NHSQ6T4R5 1651 aa23.25■■□□□ 1.31
ATP6V0C-202ENST00000564973 RIPK4P57078 832 aa23.24■■□□□ 1.31
ATP6V0C-202ENST00000564973 NCBP3Q53F19 620 aaKnown RBP23.24■■□□□ 1.31
ATP6V0C-202ENST00000564973 FAM9BQ8IZU0 186 aa23.24■■□□□ 1.31
ATP6V0C-202ENST00000564973 KCNQ2O43526 872 aa23.23■■□□□ 1.31
ATP6V0C-202ENST00000564973 TMPOP42166 694 aaKnown RBP23.23■■□□□ 1.31
ATP6V0C-202ENST00000564973 CALD1Q05682 793 aaKnown RBP23.22■■□□□ 1.31
ATP6V0C-202ENST00000564973 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
ATP6V0C-202ENST00000564973 MIER1Q8N108 512 aa23.22■■□□□ 1.31
ATP6V0C-202ENST00000564973 SLC52A2Q9HAB3 445 aa23.22■■□□□ 1.31
ATP6V0C-202ENST00000564973 DOT1LQ8TEK3 1739 aa23.21■■□□□ 1.31
ATP6V0C-202ENST00000564973 NFATC2IPQ8NCF5 419 aa23.2■■□□□ 1.3
ATP6V0C-202ENST00000564973 SLC27A3Q5K4L6 730 aa23.19■■□□□ 1.3
ATP6V0C-202ENST00000564973 PIGBQ92521 554 aa23.19■■□□□ 1.3
ATP6V0C-202ENST00000564973 LGR6Q9HBX8 967 aa23.19■■□□□ 1.3
ATP6V0C-202ENST00000564973 SCN11AQ9UI33 1791 aa23.19■■□□□ 1.3
ATP6V0C-202ENST00000564973 KDM6AO15550 1401 aaPredicted RBP23.18■■□□□ 1.3
ATP6V0C-202ENST00000564973 IL17REQ8NFR9 667 aa23.18■■□□□ 1.3
ATP6V0C-202ENST00000564973 APAF1O14727 1248 aa23.17■■□□□ 1.3
ATP6V0C-202ENST00000564973 CEMIPQ8WUJ3 1361 aa23.16■■□□□ 1.3
ATP6V0C-202ENST00000564973 EN1Q05925 392 aaPredicted RBP23.16■■□□□ 1.3
ATP6V0C-202ENST00000564973 TAF7Q15545 349 aaPredicted RBP23.16■■□□□ 1.3
ATP6V0C-202ENST00000564973 NEUROD2Q15784 382 aa23.16■■□□□ 1.3
ATP6V0C-202ENST00000564973 TTC5Q8N0Z6 440 aa23.16■■□□□ 1.3
ATP6V0C-202ENST00000564973 BABAM1Q9NWV8 329 aa23.16■■□□□ 1.3
ATP6V0C-202ENST00000564973 ITGB4P16144 1822 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms