RNA–Protein interactions for RNA: ENST00000564843.1

LINC01413-201, Transcript of long intergenic non-protein coding RNA 1413, humanhuman

TSL 3 BASIC

Gene LINC01413, Length 772 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01413-201ENST00000564843 NBPF4Q96M43 638 aa23.4■■□□□ 1.34
LINC01413-201ENST00000564843 CARD14Q9BXL6 1004 aa23.4■■□□□ 1.34
LINC01413-201ENST00000564843 ANKRD26Q9UPS8 1709 aa23.39■■□□□ 1.34
LINC01413-201ENST00000564843 NSD2O96028 1365 aa23.39■■□□□ 1.33
LINC01413-201ENST00000564843 NSD3Q9BZ95 1437 aa23.37■■□□□ 1.33
LINC01413-201ENST00000564843 PRIM1P49642 420 aaKnown RBP23.35■■□□□ 1.33
LINC01413-201ENST00000564843 KCNQ4P56696 695 aa23.35■■□□□ 1.33
LINC01413-201ENST00000564843 HSP90AB2PQ58FF8 381 aa23.35■■□□□ 1.33
LINC01413-201ENST00000564843 ZCRB1Q8TBF4 217 aaKnown RBP23.35■■□□□ 1.33
LINC01413-201ENST00000564843 SGIP1Q9BQI5 828 aa23.35■■□□□ 1.33
LINC01413-201ENST00000564843 PCGF6Q9BYE7 350 aa23.35■■□□□ 1.33
LINC01413-201ENST00000564843 TOGARAM1Q9Y4F4 1720 aa23.35■■□□□ 1.33
LINC01413-201ENST00000564843 ITGB4P16144 1822 aa23.35■■□□□ 1.33
LINC01413-201ENST00000564843 COL24A1Q17RW2 1714 aa23.34■■□□□ 1.33
LINC01413-201ENST00000564843 INSRP06213 1382 aa23.33■■□□□ 1.33
LINC01413-201ENST00000564843 CDCA8Q53HL2 280 aa23.33■■□□□ 1.33
LINC01413-201ENST00000564843 SYTL4Q96C24 671 aaPredicted RBP23.33■■□□□ 1.33
LINC01413-201ENST00000564843 PKD1L3Q7Z443 1732 aa23.33■■□□□ 1.32
LINC01413-201ENST00000564843 FLT4P35916 1363 aa23.32■■□□□ 1.32
LINC01413-201ENST00000564843 MTFR1LQ9H019 292 aa23.32■■□□□ 1.32
LINC01413-201ENST00000564843 EMILIN1Q9Y6C2 1016 aa23.32■■□□□ 1.32
LINC01413-201ENST00000564843 GOLGB1Q14789 3259 aaKnown RBP23.32■■□□□ 1.32
LINC01413-201ENST00000564843 AKT1S1Q96B36 256 aa23.31■■□□□ 1.32
LINC01413-201ENST00000564843 SMG6Q86US8 1419 aaKnown RBP23.31■■□□□ 1.32
LINC01413-201ENST00000564843 TAF1LQ8IZX4 1826 aa23.31■■□□□ 1.32
LINC01413-201ENST00000564843 TIMELESSQ9UNS1 1208 aa23.29■■□□□ 1.32
LINC01413-201ENST00000564843 FHDC1Q9C0D6 1143 aaPredicted RBP23.28■■□□□ 1.32
LINC01413-201ENST00000564843 CLSPNQ9HAW4 1339 aa23.28■■□□□ 1.32
LINC01413-201ENST00000564843 KIF24Q5T7B8 1368 aa23.27■■□□□ 1.32
LINC01413-201ENST00000564843 YY1P25490 414 aa23.27■■□□□ 1.32
LINC01413-201ENST00000564843 SLC27A3Q5K4L6 730 aa23.27■■□□□ 1.32
LINC01413-201ENST00000564843 C5P01031 1676 aa23.27■■□□□ 1.32
LINC01413-201ENST00000564843 CHD4Q14839 1912 aa23.26■■□□□ 1.31
LINC01413-201ENST00000564843 RAPGEF4Q8WZA2 1011 aa23.26■■□□□ 1.31
LINC01413-201ENST00000564843 PNPLA7Q6ZV29 1317 aa23.26■■□□□ 1.31
LINC01413-201ENST00000564843 NCAPD2Q15021 1401 aa23.25■■□□□ 1.31
LINC01413-201ENST00000564843 SYT17Q9BSW7 474 aa23.25■■□□□ 1.31
LINC01413-201ENST00000564843 CGNL1Q0VF96 1302 aa23.25■■□□□ 1.31
LINC01413-201ENST00000564843 TATP17735 454 aaPredicted RBP23.24■■□□□ 1.31
LINC01413-201ENST00000564843 CYP27B1O15528 508 aa23.23■■□□□ 1.31
LINC01413-201ENST00000564843 POLR3GLQ9BT43 218 aa23.22■■□□□ 1.31
LINC01413-201ENST00000564843 PPM1GO15355 546 aaPredicted RBP23.21■■□□□ 1.31
LINC01413-201ENST00000564843 ARXQ96QS3 562 aa23.21■■□□□ 1.31
LINC01413-201ENST00000564843 PCDH11XQ9BZA7 1347 aa23.21■■□□□ 1.31
LINC01413-201ENST00000564843 PCDH11YQ9BZA8 1340 aa23.21■■□□□ 1.31
LINC01413-201ENST00000564843 CCNL1Q9UK58 526 aaPredicted RBP23.2■■□□□ 1.3
LINC01413-201ENST00000564843 HSPA5P11021 654 aaKnown RBP23.19■■□□□ 1.3
LINC01413-201ENST00000564843 TFCP2L1Q9NZI6 479 aa23.19■■□□□ 1.3
LINC01413-201ENST00000564843 POLKQ9UBT6 870 aa23.18■■□□□ 1.3
LINC01413-201ENST00000564843 WASHC2AQ641Q2 1341 aa23.17■■□□□ 1.3
LINC01413-201ENST00000564843 DCAF8L1A6NGE4 600 aa23.17■■□□□ 1.3
LINC01413-201ENST00000564843 UBR3Q6ZT12 1888 aa23.17■■□□□ 1.3
LINC01413-201ENST00000564843 MAP3K5Q99683 1374 aa23.16■■□□□ 1.3
LINC01413-201ENST00000564843 EYA1Q99502 592 aa23.16■■□□□ 1.3
LINC01413-201ENST00000564843 SLC16A10Q8TF71 515 aa23.15■■□□□ 1.3
LINC01413-201ENST00000564843 C4BP0C0L5 1744 aa23.15■■□□□ 1.3
LINC01413-201ENST00000564843 TNNT2P45379 298 aaPredicted RBP23.14■■□□□ 1.29
LINC01413-201ENST00000564843 MPRIPQ6WCQ1 1025 aa23.14■■□□□ 1.29
LINC01413-201ENST00000564843 PALLDQ8WX93 1383 aa23.14■■□□□ 1.29
LINC01413-201ENST00000564843 COL23A1Q86Y22 540 aaPredicted RBP23.13■■□□□ 1.29
LINC01413-201ENST00000564843 EIF4G2P78344 907 aaKnown RBP eCLIP23.12■■□□□ 1.29
LINC01413-201ENST00000564843 EIF4A2Q14240 407 aaKnown RBP23.11■■□□□ 1.29
LINC01413-201ENST00000564843 AMIGO3Q86WK7 504 aa23.1■■□□□ 1.29
LINC01413-201ENST00000564843 KLHL34Q8N239 644 aa23.1■■□□□ 1.29
LINC01413-201ENST00000564843 PIGBQ92521 554 aa23.1■■□□□ 1.29
LINC01413-201ENST00000564843 PANK3Q9H999 370 aa23.1■■□□□ 1.29
LINC01413-201ENST00000564843 NKX1-1Q15270 411 aaPredicted RBP23.09■■□□□ 1.29
LINC01413-201ENST00000564843 POLD1P28340 1107 aa23.08■■□□□ 1.29
LINC01413-201ENST00000564843 MSL1Q68DK7 614 aa23.08■■□□□ 1.29
LINC01413-201ENST00000564843 NLGN2Q8NFZ4 835 aa23.08■■□□□ 1.29
LINC01413-201ENST00000564843 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.29
LINC01413-201ENST00000564843 MSH5O43196 834 aa23.07■■□□□ 1.28
LINC01413-201ENST00000564843 SMIM5Q71RC9 77 aa23.07■■□□□ 1.28
LINC01413-201ENST00000564843 SPG7Q9UQ90 795 aa23.07■■□□□ 1.28
LINC01413-201ENST00000564843 PHKG2P15735 406 aa23.04■■□□□ 1.28
LINC01413-201ENST00000564843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.04■■□□□ 1.28
LINC01413-201ENST00000564843 IGSF1Q8N6C5 1336 aa23.04■■□□□ 1.28
LINC01413-201ENST00000564843 ZNF784Q8NCA9 323 aaPredicted RBP23.02■■□□□ 1.28
LINC01413-201ENST00000564843 SMARCC1Q92922 1105 aaPredicted RBP23.02■■□□□ 1.28
LINC01413-201ENST00000564843 ASAP1Q9ULH1 1129 aa23.02■■□□□ 1.28
LINC01413-201ENST00000564843 VIRMAQ69YN4 1812 aaKnown RBP23.01■■□□□ 1.27
LINC01413-201ENST00000564843 LINC00116Q8NCU8 138 aa23.01■■□□□ 1.27
LINC01413-201ENST00000564843 GPR162Q16538 588 aa23■■□□□ 1.27
LINC01413-201ENST00000564843 IFNL2Q8IZJ0 200 aa23■■□□□ 1.27
LINC01413-201ENST00000564843 COL5A3P25940 1745 aaPredicted RBP22.99■■□□□ 1.27
LINC01413-201ENST00000564843 LOC102724428A0A0B4J2F2 783 aa22.99■■□□□ 1.27
LINC01413-201ENST00000564843 SIK1P57059 783 aa22.99■■□□□ 1.27
LINC01413-201ENST00000564843 TMOD3Q9NYL9 352 aa22.99■■□□□ 1.27
LINC01413-201ENST00000564843 MYH14Q7Z406 1995 aaKnown RBP22.99■■□□□ 1.27
LINC01413-201ENST00000564843 ITPK1Q13572 414 aa22.98■■□□□ 1.27
LINC01413-201ENST00000564843 PELP1Q8IZL8 1130 aaKnown RBP22.98■■□□□ 1.27
LINC01413-201ENST00000564843 AK7Q96M32 723 aa22.98■■□□□ 1.27
LINC01413-201ENST00000564843 PHF14O94880 888 aa22.97■■□□□ 1.27
LINC01413-201ENST00000564843 AEBP1Q8IUX7 1158 aa22.97■■□□□ 1.27
LINC01413-201ENST00000564843 ATG3Q9NT62 314 aa22.97■■□□□ 1.27
LINC01413-201ENST00000564843 KDM6AO15550 1401 aaPredicted RBP22.97■■□□□ 1.27
LINC01413-201ENST00000564843 ZNF831Q5JPB2 1677 aa22.97■■□□□ 1.27
LINC01413-201ENST00000564843 YBX3P16989 372 aaKnown RBP eCLIP22.96■■□□□ 1.27
LINC01413-201ENST00000564843 KDRP35968 1356 aa22.95■■□□□ 1.26
LINC01413-201ENST00000564843 MORC1Q86VD1 984 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms