RNA–Protein interactions for RNA: ENST00000564766.1

FUS-208, Transcript of FUS RNA binding protein, human

TSL 2

Gene FUS, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FUS-208	ENST00000564766	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.34	□□□□□ -1.23
FUS-208	ENST00000564766	POLM	Q9NP87	494 aa	Predicted RBP	7.34	□□□□□ -1.23
FUS-208	ENST00000564766	PIK3CD	O00329	1044 aa		7.33	□□□□□ -1.24
FUS-208	ENST00000564766	MAN1A2	O60476	641 aa		7.33	□□□□□ -1.24
FUS-208	ENST00000564766	SNRPB	P14678	240 aa	Known RBP	7.33	□□□□□ -1.24
FUS-208	ENST00000564766	RANGAP1	P46060	587 aa	Predicted RBP	7.33	□□□□□ -1.24
FUS-208	ENST00000564766	MAP7D1	Q3KQU3	841 aa		7.33	□□□□□ -1.24
FUS-208	ENST00000564766	PHTF2	Q8N3S3	785 aa		7.33	□□□□□ -1.24
FUS-208	ENST00000564766	ADAMTS19	Q8TE59	1207 aa		7.33	□□□□□ -1.24
FUS-208	ENST00000564766	SIRT1	Q96EB6	747 aa		7.33	□□□□□ -1.24
FUS-208	ENST00000564766	CALR3	Q96L12	384 aa	Known RBP	7.33	□□□□□ -1.24
FUS-208	ENST00000564766	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.33	□□□□□ -1.24
FUS-208	ENST00000564766	SPINT1	O43278	529 aa		7.32	□□□□□ -1.24
FUS-208	ENST00000564766	TRAK2	O60296	914 aa		7.32	□□□□□ -1.24
FUS-208	ENST00000564766	PTGIR	P43119	386 aa		7.32	□□□□□ -1.24
FUS-208	ENST00000564766	TTLL8	A6PVC2	850 aa		7.31	□□□□□ -1.24
FUS-208	ENST00000564766	MEN1	O00255	615 aa		7.31	□□□□□ -1.24
FUS-208	ENST00000564766	USP4	Q13107	963 aa		7.31	□□□□□ -1.24
FUS-208	ENST00000564766	EML3	Q32P44	896 aa		7.31	□□□□□ -1.24
FUS-208	ENST00000564766	TSGA10IP	Q3SY00	556 aa		7.31	□□□□□ -1.24
FUS-208	ENST00000564766	INSM2	Q96T92	566 aa	Predicted RBP	7.31	□□□□□ -1.24
FUS-208	ENST00000564766	ZMYND15	Q9H091	742 aa		7.31	□□□□□ -1.24
FUS-208	ENST00000564766	OSBPL3	Q9H4L5	887 aa		7.31	□□□□□ -1.24
FUS-208	ENST00000564766	USP17L5	A8MUK1	530 aa		7.3	□□□□□ -1.24
FUS-208	ENST00000564766	NFATC2IP	Q8NCF5	419 aa		7.3	□□□□□ -1.24
FUS-208	ENST00000564766	ARHGEF10L	Q9HCE6	1279 aa		7.3	□□□□□ -1.24
FUS-208	ENST00000564766	ZNF777	Q9ULD5	760 aa	Predicted RBP	7.3	□□□□□ -1.24
FUS-208	ENST00000564766	SOS2	Q07890	1332 aa	Predicted RBP	7.29	□□□□□ -1.24
FUS-208	ENST00000564766	SOBP	A7XYQ1	873 aa		7.29	□□□□□ -1.24
FUS-208	ENST00000564766	CTSO	P43234	321 aa	Predicted RBP	7.29	□□□□□ -1.24
FUS-208	ENST00000564766	NCOA4	Q13772	614 aa		7.29	□□□□□ -1.24
FUS-208	ENST00000564766	DEPDC4	Q8N2C3	294 aa		7.29	□□□□□ -1.24
FUS-208	ENST00000564766	NLRP3	Q96P20	1036 aa		7.29	□□□□□ -1.24
FUS-208	ENST00000564766	UCN2	Q96RP3	112 aa		7.29	□□□□□ -1.24
FUS-208	ENST00000564766	RAB6B	Q9NRW1	208 aa		7.29	□□□□□ -1.24
FUS-208	ENST00000564766	CHIC2	Q9UKJ5	165 aa		7.29	□□□□□ -1.24
FUS-208	ENST00000564766	FIGNL2	A6NMB9	653 aa		7.28	□□□□□ -1.24
FUS-208	ENST00000564766	ATP9B	O43861	1147 aa		7.28	□□□□□ -1.24
FUS-208	ENST00000564766	DNMT3L	Q9UJW3	386 aa		7.28	□□□□□ -1.24
FUS-208	ENST00000564766		A0A1W2PRU2	124 aa		7.27	□□□□□ -1.25
FUS-208	ENST00000564766	USP17L3	A6NCW0	530 aa		7.27	□□□□□ -1.25
FUS-208	ENST00000564766	USP17L4	A6NCW7	530 aa		7.27	□□□□□ -1.25
FUS-208	ENST00000564766	GNRH1	P01148	92 aa		7.27	□□□□□ -1.25
FUS-208	ENST00000564766	PSME1	Q06323	249 aa		7.27	□□□□□ -1.25
FUS-208	ENST00000564766	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	7.27	□□□□□ -1.25
FUS-208	ENST00000564766	USP17L2	Q6R6M4	530 aa		7.27	□□□□□ -1.25
FUS-208	ENST00000564766	TBC1D9	Q6ZT07	1266 aa		7.27	□□□□□ -1.25
FUS-208	ENST00000564766	USP17L1	Q7RTZ2	530 aa		7.27	□□□□□ -1.25
FUS-208	ENST00000564766	KDF1	Q8NAX2	398 aa	Predicted RBP	7.27	□□□□□ -1.25
FUS-208	ENST00000564766	NOD1	Q9Y239	953 aa		7.27	□□□□□ -1.25
FUS-208	ENST00000564766	LZTS3	O60299	673 aa	Predicted RBP	7.26	□□□□□ -1.25
FUS-208	ENST00000564766	ESCO1	Q5FWF5	840 aa		7.26	□□□□□ -1.25
FUS-208	ENST00000564766	SLC27A3	Q5K4L6	730 aa		7.26	□□□□□ -1.25
FUS-208	ENST00000564766	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.26	□□□□□ -1.25
FUS-208	ENST00000564766	RNF217	Q8TC41	542 aa		7.26	□□□□□ -1.25
FUS-208	ENST00000564766	CLN3	Q13286	438 aa		7.25	□□□□□ -1.25
FUS-208	ENST00000564766	GTF2E1	P29083	439 aa	Predicted RBP	7.24	□□□□□ -1.25
FUS-208	ENST00000564766	GTF2I	P78347	998 aa		7.24	□□□□□ -1.25
FUS-208	ENST00000564766	LYSMD3	Q7Z3D4	306 aa		7.24	□□□□□ -1.25
FUS-208	ENST00000564766	TRIM50	Q86XT4	487 aa		7.24	□□□□□ -1.25
FUS-208	ENST00000564766	PLEKHM2	Q8IWE5	1019 aa		7.24	□□□□□ -1.25
FUS-208	ENST00000564766	CNKSR1	Q969H4	720 aa		7.24	□□□□□ -1.25
FUS-208	ENST00000564766	TFIP11	Q9UBB9	837 aa	Known RBP	7.24	□□□□□ -1.25
FUS-208	ENST00000564766	PALM3	A6NDB9	673 aa	Predicted RBP	7.23	□□□□□ -1.25
FUS-208	ENST00000564766	STAU1	O95793	577 aa	Known RBP	7.23	□□□□□ -1.25
FUS-208	ENST00000564766	GPC1	P35052	558 aa		7.23	□□□□□ -1.25
FUS-208	ENST00000564766	GDF10	P55107	478 aa		7.23	□□□□□ -1.25
FUS-208	ENST00000564766	TRIM26	Q12899	539 aa	Predicted RBP	7.23	□□□□□ -1.25
FUS-208	ENST00000564766	PRICKLE2	Q7Z3G6	844 aa		7.23	□□□□□ -1.25
FUS-208	ENST00000564766	ESYT1	Q9BSJ8	1104 aa		7.23	□□□□□ -1.25
FUS-208	ENST00000564766	PPP1R12C	Q9BZL4	782 aa		7.23	□□□□□ -1.25
FUS-208	ENST00000564766	ETNK1	Q9HBU6	452 aa		7.23	□□□□□ -1.25
FUS-208	ENST00000564766	MAFB	Q9Y5Q3	323 aa	Predicted RBP	7.23	□□□□□ -1.25
FUS-208	ENST00000564766	IL2RA	P01589	272 aa		7.22	□□□□□ -1.25
FUS-208	ENST00000564766	RNF144A	P50876	292 aa	Predicted RBP	7.22	□□□□□ -1.25
FUS-208	ENST00000564766	ATP1A2	P50993	1020 aa		7.22	□□□□□ -1.25
FUS-208	ENST00000564766	ZNF775	Q96BV0	537 aa	Predicted RBP	7.22	□□□□□ -1.25
FUS-208	ENST00000564766	NXF1	Q9UBU9	619 aa	Known RBP	7.22	□□□□□ -1.25
FUS-208	ENST00000564766	PTS	Q03393	145 aa		7.21	□□□□□ -1.26
FUS-208	ENST00000564766	TLR1	Q15399	786 aa		7.21	□□□□□ -1.26
FUS-208	ENST00000564766	CCDC97	Q96F63	343 aa	Predicted RBP	7.21	□□□□□ -1.26
FUS-208	ENST00000564766	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.21	□□□□□ -1.26
FUS-208	ENST00000564766	MKRN1	Q9UHC7	482 aa	Known RBP	7.21	□□□□□ -1.26
FUS-208	ENST00000564766	ARID3C	A6NKF2	412 aa		7.2	□□□□□ -1.26
FUS-208	ENST00000564766	TERT	O14746	1132 aa	Known RBP	7.2	□□□□□ -1.26
FUS-208	ENST00000564766	RHOQ	P17081	205 aa		7.2	□□□□□ -1.26
FUS-208	ENST00000564766	LMOD1	P29536	600 aa	Predicted RBP	7.2	□□□□□ -1.26
FUS-208	ENST00000564766	VEGFB	P49765	207 aa		7.2	□□□□□ -1.26
FUS-208	ENST00000564766	SCNN1D	P51172	638 aa		7.2	□□□□□ -1.26
FUS-208	ENST00000564766	TMEM214	Q6NUQ4	689 aa	Known RBP	7.2	□□□□□ -1.26
FUS-208	ENST00000564766	SLC16A10	Q8TF71	515 aa		7.2	□□□□□ -1.26
FUS-208	ENST00000564766	XAGE2	Q96GT9	111 aa		7.2	□□□□□ -1.26
FUS-208	ENST00000564766	SERTAD1	Q9UHV2	236 aa		7.2	□□□□□ -1.26
FUS-208	ENST00000564766	RBM19	Q9Y4C8	960 aa	Known RBP	7.2	□□□□□ -1.26
FUS-208	ENST00000564766	PCDHGA11	Q9Y5H2	935 aa		7.2	□□□□□ -1.26
FUS-208	ENST00000564766	INHA	P05111	366 aa		7.19	□□□□□ -1.26
FUS-208	ENST00000564766	CENPC	Q03188	943 aa		7.19	□□□□□ -1.26
FUS-208	ENST00000564766	GNAS	Q5JWF2	1037 aa		7.19	□□□□□ -1.26
FUS-208	ENST00000564766	OGFOD1	Q8N543	542 aa		7.19	□□□□□ -1.26
FUS-208	ENST00000564766	TPCN2	Q8NHX9	752 aa		7.19	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms