RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 USHBP1Q8N6Y0 703 aa25.69■■□□□ 1.7
CLN6-204ENST00000564752 BTAF1O14981 1849 aa25.69■■□□□ 1.7
CLN6-204ENST00000564752 INSRP06213 1382 aa25.69■■□□□ 1.7
CLN6-204ENST00000564752 MEGF6O75095 1541 aa25.68■■□□□ 1.7
CLN6-204ENST00000564752 CGNL1Q0VF96 1302 aa25.68■■□□□ 1.7
CLN6-204ENST00000564752 SYTL4Q96C24 671 aaPredicted RBP25.68■■□□□ 1.7
CLN6-204ENST00000564752 KAT6BQ8WYB5 2073 aa25.68■■□□□ 1.7
CLN6-204ENST00000564752 SMG6Q86US8 1419 aaKnown RBP25.67■■□□□ 1.7
CLN6-204ENST00000564752 SGIP1Q9BQI5 828 aa25.67■■□□□ 1.7
CLN6-204ENST00000564752 KIF24Q5T7B8 1368 aa25.67■■□□□ 1.7
CLN6-204ENST00000564752 RAPGEF4Q8WZA2 1011 aa25.66■■□□□ 1.7
CLN6-204ENST00000564752 AKT1S1Q96B36 256 aa25.66■■□□□ 1.7
CLN6-204ENST00000564752 FLT4P35916 1363 aa25.66■■□□□ 1.7
CLN6-204ENST00000564752 PAPPAQ13219 1627 aa25.66■■□□□ 1.7
CLN6-204ENST00000564752 NSD3Q9BZ95 1437 aa25.64■■□□□ 1.7
CLN6-204ENST00000564752 TATP17735 454 aaPredicted RBP25.64■■□□□ 1.7
CLN6-204ENST00000564752 NSD2O96028 1365 aa25.64■■□□□ 1.69
CLN6-204ENST00000564752 RGPD2P0DJD1 1756 aa25.63■■□□□ 1.69
CLN6-204ENST00000564752 EMILIN1Q9Y6C2 1016 aa25.62■■□□□ 1.69
CLN6-204ENST00000564752 KCNQ4P56696 695 aa25.61■■□□□ 1.69
CLN6-204ENST00000564752 SYT17Q9BSW7 474 aa25.61■■□□□ 1.69
CLN6-204ENST00000564752 FHDC1Q9C0D6 1143 aaPredicted RBP25.61■■□□□ 1.69
CLN6-204ENST00000564752 KIF20BQ96Q89 1820 aa25.59■■□□□ 1.69
CLN6-204ENST00000564752 SLC16A10Q8TF71 515 aa25.58■■□□□ 1.69
CLN6-204ENST00000564752 ARXQ96QS3 562 aa25.58■■□□□ 1.69
CLN6-204ENST00000564752 SHANK3Q9BYB0 1731 aa25.57■■□□□ 1.68
CLN6-204ENST00000564752 TFCP2L1Q9NZI6 479 aa25.57■■□□□ 1.68
CLN6-204ENST00000564752 PNPLA7Q6ZV29 1317 aa25.57■■□□□ 1.68
CLN6-204ENST00000564752 PCDH11XQ9BZA7 1347 aa25.57■■□□□ 1.68
CLN6-204ENST00000564752 PCDH11YQ9BZA8 1340 aa25.57■■□□□ 1.68
CLN6-204ENST00000564752 PPM1GO15355 546 aaPredicted RBP25.56■■□□□ 1.68
CLN6-204ENST00000564752 CCNL1Q9UK58 526 aaPredicted RBP25.56■■□□□ 1.68
CLN6-204ENST00000564752 WASHC2AQ641Q2 1341 aa25.56■■□□□ 1.68
CLN6-204ENST00000564752 UTRNP46939 3433 aa25.55■■□□□ 1.68
CLN6-204ENST00000564752 EIF4G2P78344 907 aaKnown RBP eCLIP25.55■■□□□ 1.68
CLN6-204ENST00000564752 DOT1LQ8TEK3 1739 aa25.54■■□□□ 1.68
CLN6-204ENST00000564752 CYP27B1O15528 508 aa25.54■■□□□ 1.68
CLN6-204ENST00000564752 POLR3GLQ9BT43 218 aa25.53■■□□□ 1.68
CLN6-204ENST00000564752 POLKQ9UBT6 870 aa25.52■■□□□ 1.68
CLN6-204ENST00000564752 CHD4Q14839 1912 aa25.52■■□□□ 1.68
CLN6-204ENST00000564752 HSPA5P11021 654 aaKnown RBP25.51■■□□□ 1.67
CLN6-204ENST00000564752 NCAPD2Q15021 1401 aa25.5■■□□□ 1.67
CLN6-204ENST00000564752 MAP3K5Q99683 1374 aa25.5■■□□□ 1.67
CLN6-204ENST00000564752 EYA1Q99502 592 aa25.49■■□□□ 1.67
CLN6-204ENST00000564752 LY75O60449 1722 aa25.49■■□□□ 1.67
CLN6-204ENST00000564752 POLD1P28340 1107 aa25.48■■□□□ 1.67
CLN6-204ENST00000564752 MPRIPQ6WCQ1 1025 aa25.48■■□□□ 1.67
CLN6-204ENST00000564752 NKX1-1Q15270 411 aaPredicted RBP25.47■■□□□ 1.67
CLN6-204ENST00000564752 SPG7Q9UQ90 795 aa25.47■■□□□ 1.67
CLN6-204ENST00000564752 HMGB2P26583 209 aaKnown RBP25.45■■□□□ 1.66
CLN6-204ENST00000564752 PANK3Q9H999 370 aa25.45■■□□□ 1.66
CLN6-204ENST00000564752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.45■■□□□ 1.66
CLN6-204ENST00000564752 QSER1Q2KHR3 1735 aa25.45■■□□□ 1.66
CLN6-204ENST00000564752 PALLDQ8WX93 1383 aa25.44■■□□□ 1.66
CLN6-204ENST00000564752 TNNT2P45379 298 aaPredicted RBP25.44■■□□□ 1.66
CLN6-204ENST00000564752 COL23A1Q86Y22 540 aaPredicted RBP25.44■■□□□ 1.66
CLN6-204ENST00000564752 PIGBQ92521 554 aa25.43■■□□□ 1.66
CLN6-204ENST00000564752 SMARCC1Q92922 1105 aaPredicted RBP25.43■■□□□ 1.66
CLN6-204ENST00000564752 EIF4A2Q14240 407 aaKnown RBP25.42■■□□□ 1.66
CLN6-204ENST00000564752 ZNF784Q8NCA9 323 aaPredicted RBP25.42■■□□□ 1.66
CLN6-204ENST00000564752 ANKRD26Q9UPS8 1709 aa25.41■■□□□ 1.66
CLN6-204ENST00000564752 MSH5O43196 834 aa25.41■■□□□ 1.66
CLN6-204ENST00000564752 TUBGCP6Q96RT7 1819 aa25.4■■□□□ 1.66
CLN6-204ENST00000564752 KLHL34Q8N239 644 aa25.39■■□□□ 1.66
CLN6-204ENST00000564752 MAP2P11137 1827 aaKnown RBP25.39■■□□□ 1.65
CLN6-204ENST00000564752 COL24A1Q17RW2 1714 aa25.38■■□□□ 1.65
CLN6-204ENST00000564752 PKD1L3Q7Z443 1732 aa25.38■■□□□ 1.65
CLN6-204ENST00000564752 IFNL2Q8IZJ0 200 aa25.38■■□□□ 1.65
CLN6-204ENST00000564752 FLAD1Q8NFF5 587 aa25.38■■□□□ 1.65
CLN6-204ENST00000564752 PHKG2P15735 406 aa25.37■■□□□ 1.65
CLN6-204ENST00000564752 GPR162Q16538 588 aa25.36■■□□□ 1.65
CLN6-204ENST00000564752 TOGARAM1Q9Y4F4 1720 aa25.34■■□□□ 1.65
CLN6-204ENST00000564752 TMOD3Q9NYL9 352 aa25.34■■□□□ 1.65
CLN6-204ENST00000564752 IGSF1Q8N6C5 1336 aa25.34■■□□□ 1.65
CLN6-204ENST00000564752 PLEKHG2Q9H7P9 1386 aa25.33■■□□□ 1.65
CLN6-204ENST00000564752 MSL1Q68DK7 614 aa25.33■■□□□ 1.65
CLN6-204ENST00000564752 NLGN2Q8NFZ4 835 aa25.33■■□□□ 1.65
CLN6-204ENST00000564752 GOLGB1Q14789 3259 aaKnown RBP25.33■■□□□ 1.65
CLN6-204ENST00000564752 LOC102724428A0A0B4J2F2 783 aa25.32■■□□□ 1.64
CLN6-204ENST00000564752 SIK1P57059 783 aa25.32■■□□□ 1.64
CLN6-204ENST00000564752 AK7Q96M32 723 aa25.32■■□□□ 1.64
CLN6-204ENST00000564752 ASAP1Q9ULH1 1129 aa25.32■■□□□ 1.64
CLN6-204ENST00000564752 MORC1Q86VD1 984 aa25.31■■□□□ 1.64
CLN6-204ENST00000564752 C5P01031 1676 aa25.31■■□□□ 1.64
CLN6-204ENST00000564752 ITGB4P16144 1822 aa25.3■■□□□ 1.64
CLN6-204ENST00000564752 AMIGO3Q86WK7 504 aa25.3■■□□□ 1.64
CLN6-204ENST00000564752 LINC00116Q8NCU8 138 aa25.29■■□□□ 1.64
CLN6-204ENST00000564752 KNSTRNQ9Y448 316 aa25.29■■□□□ 1.64
CLN6-204ENST00000564752 ATG3Q9NT62 314 aa25.28■■□□□ 1.64
CLN6-204ENST00000564752 PLEKHO1Q53GL0 409 aaPredicted RBP25.27■■□□□ 1.64
CLN6-204ENST00000564752 PELP1Q8IZL8 1130 aaKnown RBP25.27■■□□□ 1.64
CLN6-204ENST00000564752 TAF1LQ8IZX4 1826 aa25.26■■□□□ 1.63
CLN6-204ENST00000564752 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.26■■□□□ 1.63
CLN6-204ENST00000564752 ERVV-2B6SEH9 535 aa25.26■■□□□ 1.63
CLN6-204ENST00000564752 ATP6V1AP38606 617 aa25.26■■□□□ 1.63
CLN6-204ENST00000564752 ITPK1Q13572 414 aa25.26■■□□□ 1.63
CLN6-204ENST00000564752 SMIM5Q71RC9 77 aa25.26■■□□□ 1.63
CLN6-204ENST00000564752 C4BP0C0L5 1744 aa25.26■■□□□ 1.63
CLN6-204ENST00000564752 PHF14O94880 888 aa25.25■■□□□ 1.63
CLN6-204ENST00000564752 HSP90AB1P08238 724 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms