RNA–Protein interactions for RNA: ENST00000564732.1

ATP2A1-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 5

Gene ATP2A1, Length 831 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-208ENST00000564732 SMG6Q86US8 1419 aaKnown RBP19.89■□□□□ 0.77
ATP2A1-208ENST00000564732 CDCA8Q53HL2 280 aa19.87■□□□□ 0.77
ATP2A1-208ENST00000564732 SLC27A3Q5K4L6 730 aa19.87■□□□□ 0.77
ATP2A1-208ENST00000564732 NBPF6Q5VWK0 638 aa19.87■□□□□ 0.77
ATP2A1-208ENST00000564732 ZCRB1Q8TBF4 217 aaKnown RBP19.87■□□□□ 0.77
ATP2A1-208ENST00000564732 NBPF4Q96M43 638 aa19.87■□□□□ 0.77
ATP2A1-208ENST00000564732 COL24A1Q17RW2 1714 aa19.87■□□□□ 0.77
ATP2A1-208ENST00000564732 ANKRD26Q9UPS8 1709 aa19.87■□□□□ 0.77
ATP2A1-208ENST00000564732 NSD3Q9BZ95 1437 aa19.86■□□□□ 0.77
ATP2A1-208ENST00000564732 INSRP06213 1382 aa19.86■□□□□ 0.77
ATP2A1-208ENST00000564732 FLT4P35916 1363 aa19.86■□□□□ 0.77
ATP2A1-208ENST00000564732 DCAF8L1A6NGE4 600 aa19.86■□□□□ 0.77
ATP2A1-208ENST00000564732 PRIM1P49642 420 aaKnown RBP19.86■□□□□ 0.77
ATP2A1-208ENST00000564732 USHBP1Q8N6Y0 703 aa19.86■□□□□ 0.77
ATP2A1-208ENST00000564732 AKT1S1Q96B36 256 aa19.86■□□□□ 0.77
ATP2A1-208ENST00000564732 SYTL4Q96C24 671 aaPredicted RBP19.86■□□□□ 0.77
ATP2A1-208ENST00000564732 FHDC1Q9C0D6 1143 aaPredicted RBP19.86■□□□□ 0.77
ATP2A1-208ENST00000564732 KIF24Q5T7B8 1368 aa19.84■□□□□ 0.77
ATP2A1-208ENST00000564732 CGNL1Q0VF96 1302 aa19.84■□□□□ 0.77
ATP2A1-208ENST00000564732 CARD14Q9BXL6 1004 aa19.84■□□□□ 0.77
ATP2A1-208ENST00000564732 KCNQ4P56696 695 aa19.83■□□□□ 0.77
ATP2A1-208ENST00000564732 HSP90AB2PQ58FF8 381 aa19.83■□□□□ 0.77
ATP2A1-208ENST00000564732 SYT17Q9BSW7 474 aa19.83■□□□□ 0.77
ATP2A1-208ENST00000564732 PKD1L3Q7Z443 1732 aa19.82■□□□□ 0.76
ATP2A1-208ENST00000564732 RAPGEF4Q8WZA2 1011 aa19.82■□□□□ 0.76
ATP2A1-208ENST00000564732 TOGARAM1Q9Y4F4 1720 aa19.82■□□□□ 0.76
ATP2A1-208ENST00000564732 MAP3K5Q99683 1374 aa19.82■□□□□ 0.76
ATP2A1-208ENST00000564732 PNPLA7Q6ZV29 1317 aa19.81■□□□□ 0.76
ATP2A1-208ENST00000564732 UTRNP46939 3433 aa19.81■□□□□ 0.76
ATP2A1-208ENST00000564732 ARXQ96QS3 562 aa19.81■□□□□ 0.76
ATP2A1-208ENST00000564732 NCAPD2Q15021 1401 aa19.8■□□□□ 0.76
ATP2A1-208ENST00000564732 TIMELESSQ9UNS1 1208 aa19.8■□□□□ 0.76
ATP2A1-208ENST00000564732 C5P01031 1676 aa19.79■□□□□ 0.76
ATP2A1-208ENST00000564732 TATP17735 454 aaPredicted RBP19.79■□□□□ 0.76
ATP2A1-208ENST00000564732 EMILIN1Q9Y6C2 1016 aa19.79■□□□□ 0.76
ATP2A1-208ENST00000564732 PCDH11XQ9BZA7 1347 aa19.78■□□□□ 0.76
ATP2A1-208ENST00000564732 PCDH11YQ9BZA8 1340 aa19.78■□□□□ 0.76
ATP2A1-208ENST00000564732 CLSPNQ9HAW4 1339 aa19.77■□□□□ 0.76
ATP2A1-208ENST00000564732 ITGB4P16144 1822 aa19.77■□□□□ 0.76
ATP2A1-208ENST00000564732 SLC16A10Q8TF71 515 aa19.77■□□□□ 0.76
ATP2A1-208ENST00000564732 TFCP2L1Q9NZI6 479 aa19.77■□□□□ 0.76
ATP2A1-208ENST00000564732 CCNL1Q9UK58 526 aaPredicted RBP19.77■□□□□ 0.76
ATP2A1-208ENST00000564732 MAP2P11137 1827 aaKnown RBP19.76■□□□□ 0.75
ATP2A1-208ENST00000564732 TAF1LQ8IZX4 1826 aa19.76■□□□□ 0.75
ATP2A1-208ENST00000564732 CHD4Q14839 1912 aa19.75■□□□□ 0.75
ATP2A1-208ENST00000564732 CYP27B1O15528 508 aa19.74■□□□□ 0.75
ATP2A1-208ENST00000564732 POLD1P28340 1107 aa19.72■□□□□ 0.75
ATP2A1-208ENST00000564732 PALLDQ8WX93 1383 aa19.71■□□□□ 0.75
ATP2A1-208ENST00000564732 PPM1GO15355 546 aaPredicted RBP19.71■□□□□ 0.75
ATP2A1-208ENST00000564732 PCGF6Q9BYE7 350 aa19.71■□□□□ 0.75
ATP2A1-208ENST00000564732 WASHC2AQ641Q2 1341 aa19.71■□□□□ 0.75
ATP2A1-208ENST00000564732 C4BP0C0L5 1744 aa19.7■□□□□ 0.74
ATP2A1-208ENST00000564732 MPRIPQ6WCQ1 1025 aa19.69■□□□□ 0.74
ATP2A1-208ENST00000564732 KLHL34Q8N239 644 aa19.69■□□□□ 0.74
ATP2A1-208ENST00000564732 COL23A1Q86Y22 540 aaPredicted RBP19.68■□□□□ 0.74
ATP2A1-208ENST00000564732 ZNF784Q8NCA9 323 aaPredicted RBP19.67■□□□□ 0.74
ATP2A1-208ENST00000564732 EYA1Q99502 592 aa19.67■□□□□ 0.74
ATP2A1-208ENST00000564732 POLR3GLQ9BT43 218 aa19.67■□□□□ 0.74
ATP2A1-208ENST00000564732 POLKQ9UBT6 870 aa19.67■□□□□ 0.74
ATP2A1-208ENST00000564732 GOLGB1Q14789 3259 aaKnown RBP19.66■□□□□ 0.74
ATP2A1-208ENST00000564732 NKX1-1Q15270 411 aaPredicted RBP19.66■□□□□ 0.74
ATP2A1-208ENST00000564732 UBR3Q6ZT12 1888 aa19.66■□□□□ 0.74
ATP2A1-208ENST00000564732 MSH5O43196 834 aa19.65■□□□□ 0.74
ATP2A1-208ENST00000564732 NLGN2Q8NFZ4 835 aa19.65■□□□□ 0.74
ATP2A1-208ENST00000564732 SPG7Q9UQ90 795 aa19.65■□□□□ 0.74
ATP2A1-208ENST00000564732 GPR162Q16538 588 aa19.64■□□□□ 0.73
ATP2A1-208ENST00000564732 PIGBQ92521 554 aa19.64■□□□□ 0.73
ATP2A1-208ENST00000564732 SMARCC1Q92922 1105 aaPredicted RBP19.64■□□□□ 0.73
ATP2A1-208ENST00000564732 MSL1Q68DK7 614 aa19.63■□□□□ 0.73
ATP2A1-208ENST00000564732 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.63■□□□□ 0.738e-8■■□□□ 12.9
ATP2A1-208ENST00000564732 HSPA5P11021 654 aaKnown RBP19.62■□□□□ 0.73
ATP2A1-208ENST00000564732 TNNT2P45379 298 aaPredicted RBP19.62■□□□□ 0.73
ATP2A1-208ENST00000564732 EIF4G2P78344 907 aaKnown RBP eCLIP19.62■□□□□ 0.73
ATP2A1-208ENST00000564732 EIF4A2Q14240 407 aaKnown RBP19.62■□□□□ 0.73
ATP2A1-208ENST00000564732 PLEKHG2Q9H7P9 1386 aa19.61■□□□□ 0.73
ATP2A1-208ENST00000564732 AMIGO3Q86WK7 504 aa19.61■□□□□ 0.73
ATP2A1-208ENST00000564732 PHKG2P15735 406 aa19.6■□□□□ 0.73
ATP2A1-208ENST00000564732 HMGB2P26583 209 aaKnown RBP19.6■□□□□ 0.73
ATP2A1-208ENST00000564732 FLAD1Q8NFF5 587 aa19.6■□□□□ 0.73
ATP2A1-208ENST00000564732 IGSF1Q8N6C5 1336 aa19.59■□□□□ 0.73
ATP2A1-208ENST00000564732 PELP1Q8IZL8 1130 aaKnown RBP19.59■□□□□ 0.73
ATP2A1-208ENST00000564732 AK7Q96M32 723 aa19.59■□□□□ 0.73
ATP2A1-208ENST00000564732 LOC102724428A0A0B4J2F2 783 aa19.58■□□□□ 0.72
ATP2A1-208ENST00000564732 SIK1P57059 783 aa19.58■□□□□ 0.72
ATP2A1-208ENST00000564732 IFNL2Q8IZJ0 200 aa19.58■□□□□ 0.72
ATP2A1-208ENST00000564732 PANK3Q9H999 370 aa19.58■□□□□ 0.72
ATP2A1-208ENST00000564732 TMOD3Q9NYL9 352 aa19.58■□□□□ 0.72
ATP2A1-208ENST00000564732 LINC00116Q8NCU8 138 aa19.57■□□□□ 0.72
ATP2A1-208ENST00000564732 ASAP1Q9ULH1 1129 aa19.57■□□□□ 0.72
ATP2A1-208ENST00000564732 YBX3P16989 372 aaKnown RBP eCLIP19.56■□□□□ 0.72
ATP2A1-208ENST00000564732 SMIM5Q71RC9 77 aa19.56■□□□□ 0.72
ATP2A1-208ENST00000564732 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.55■□□□□ 0.72
ATP2A1-208ENST00000564732 PHF14O94880 888 aa19.55■□□□□ 0.72
ATP2A1-208ENST00000564732 ZNF831Q5JPB2 1677 aa19.55■□□□□ 0.72
ATP2A1-208ENST00000564732 KDRP35968 1356 aa19.55■□□□□ 0.72
ATP2A1-208ENST00000564732 ITPK1Q13572 414 aa19.54■□□□□ 0.72
ATP2A1-208ENST00000564732 SSFA2P28290 1259 aa19.53■□□□□ 0.72
ATP2A1-208ENST00000564732 CCER1Q8TC90 406 aaPredicted RBP19.53■□□□□ 0.72
ATP2A1-208ENST00000564732 ATG3Q9NT62 314 aa19.53■□□□□ 0.72
ATP2A1-208ENST00000564732 CD2APQ9Y5K6 639 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms