RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 OVOS2A0A0G2JMS6 1433 aa21.39■■□□□ 1.02
RAB40C-208ENST00000564703 ANP32CO43423 234 aa21.39■■□□□ 1.01
RAB40C-208ENST00000564703 PLEKHO1Q53GL0 409 aaPredicted RBP21.39■■□□□ 1.01
RAB40C-208ENST00000564703 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.39■■□□□ 1.01
RAB40C-208ENST00000564703 TNS2Q63HR2 1409 aa21.38■■□□□ 1.01
RAB40C-208ENST00000564703 TRIM37O94972 964 aa21.38■■□□□ 1.01
RAB40C-208ENST00000564703 HMOX1P09601 288 aa21.38■■□□□ 1.01
RAB40C-208ENST00000564703 KAT6BQ8WYB5 2073 aa21.38■■□□□ 1.01
RAB40C-208ENST00000564703 LRRC37A3O60309 1634 aa21.37■■□□□ 1.01
RAB40C-208ENST00000564703 AMOTQ4VCS5 1084 aa21.37■■□□□ 1.01
RAB40C-208ENST00000564703 MEGF6O75095 1541 aa21.37■■□□□ 1.01
RAB40C-208ENST00000564703 PCDH11XQ9BZA7 1347 aa21.36■■□□□ 1.01
RAB40C-208ENST00000564703 PCDH11YQ9BZA8 1340 aa21.36■■□□□ 1.01
RAB40C-208ENST00000564703 U2AF1L5P0DN76 240 aaPredicted RBP21.36■■□□□ 1.01
RAB40C-208ENST00000564703 U2AF1Q01081 240 aaKnown RBP eCLIP21.36■■□□□ 1.01
RAB40C-208ENST00000564703 AEBP1Q8IUX7 1158 aa21.36■■□□□ 1.01
RAB40C-208ENST00000564703 NCAPD2Q15021 1401 aa21.36■■□□□ 1.01
RAB40C-208ENST00000564703 APBA3O96018 575 aa21.33■■□□□ 1.01
RAB40C-208ENST00000564703 BAG6P46379 1132 aa21.33■■□□□ 1.01
RAB40C-208ENST00000564703 IFNL2Q8IZJ0 200 aa21.33■■□□□ 1.01
RAB40C-208ENST00000564703 ACSBG1Q96GR2 724 aa21.32■■□□□ 1
RAB40C-208ENST00000564703 BCL11BQ9C0K0 894 aaPredicted RBP21.32■■□□□ 1
RAB40C-208ENST00000564703 NEFMP07197 916 aa21.31■■□□□ 1
RAB40C-208ENST00000564703 C1orf141Q5JVX7 400 aa21.31■■□□□ 1
RAB40C-208ENST00000564703 KDRP35968 1356 aa21.31■■□□□ 1
RAB40C-208ENST00000564703 PLEKHG2Q9H7P9 1386 aa21.31■■□□□ 1
RAB40C-208ENST00000564703 BCL9O00512 1426 aa21.3■■□□□ 1
RAB40C-208ENST00000564703 CYP27B1O15528 508 aa21.3■■□□□ 1
RAB40C-208ENST00000564703 FCHSD2O94868 740 aa21.3■■□□□ 1
RAB40C-208ENST00000564703 ZNF530Q6P9A1 599 aaPredicted RBP21.3■■□□□ 1
RAB40C-208ENST00000564703 SYTL4Q96C24 671 aaPredicted RBP21.3■■□□□ 1
RAB40C-208ENST00000564703 PNNQ9H307 717 aaKnown RBP21.3■■□□□ 1
RAB40C-208ENST00000564703 COL3A1P02461 1466 aaPredicted RBP21.3■■□□□ 1
RAB40C-208ENST00000564703 HSP90AB1P08238 724 aaKnown RBP21.29■■□□□ 1
RAB40C-208ENST00000564703 RGPD1P0DJD0 1748 aa21.27■■□□□ 1
RAB40C-208ENST00000564703 KCNQ2O43526 872 aa21.27■■□□□ 1
RAB40C-208ENST00000564703 PHKG2P15735 406 aa21.27■■□□□ 1
RAB40C-208ENST00000564703 PRIM1P49642 420 aaKnown RBP21.27■■□□□ 1
RAB40C-208ENST00000564703 PRKAR2BP31323 418 aa21.26■□□□□ 0.99
RAB40C-208ENST00000564703 WDR43Q15061 677 aaKnown RBP eCLIP21.26■□□□□ 0.99
RAB40C-208ENST00000564703 NKX1-1Q15270 411 aaPredicted RBP21.26■□□□□ 0.99
RAB40C-208ENST00000564703 DEFB132Q7Z7B7 95 aa21.26■□□□□ 0.99
RAB40C-208ENST00000564703 EN1Q05925 392 aaPredicted RBP21.24■□□□□ 0.99
RAB40C-208ENST00000564703 GAS2L2Q8NHY3 880 aa21.24■□□□□ 0.99
RAB40C-208ENST00000564703 DCAF5Q96JK2 942 aa21.24■□□□□ 0.99
RAB40C-208ENST00000564703 RSPH6AQ9H0K4 717 aa21.24■□□□□ 0.99
RAB40C-208ENST00000564703 MTHFSDQ2M296 383 aaKnown RBP21.23■□□□□ 0.99
RAB40C-208ENST00000564703 AKAP4Q5JQC9 854 aa21.23■□□□□ 0.99
RAB40C-208ENST00000564703 PKD1L3Q7Z443 1732 aa21.23■□□□□ 0.99
RAB40C-208ENST00000564703 SBF2Q86WG5 1849 aa21.22■□□□□ 0.99
RAB40C-208ENST00000564703 PLSCR1O15162 318 aa21.22■□□□□ 0.99
RAB40C-208ENST00000564703 MPRIPQ6WCQ1 1025 aa21.22■□□□□ 0.99
RAB40C-208ENST00000564703 PTF1AQ7RTS3 328 aa21.22■□□□□ 0.99
RAB40C-208ENST00000564703 SHANK3Q9BYB0 1731 aa21.2■□□□□ 0.98
RAB40C-208ENST00000564703 ERVV-2B6SEH9 535 aa21.19■□□□□ 0.98
RAB40C-208ENST00000564703 EZH2Q15910 746 aaKnown RBP21.19■□□□□ 0.98
RAB40C-208ENST00000564703 PHACTR3Q96KR7 559 aa21.19■□□□□ 0.98
RAB40C-208ENST00000564703 CAMKK2Q96RR4 588 aa21.19■□□□□ 0.98
RAB40C-208ENST00000564703 TMOD3Q9NYL9 352 aa21.19■□□□□ 0.98
RAB40C-208ENST00000564703 MAPK8IP3Q9UPT6 1336 aa21.19■□□□□ 0.98
RAB40C-208ENST00000564703 CABP4P57796 275 aa21.18■□□□□ 0.98
RAB40C-208ENST00000564703 EP400Q96L91 3159 aa21.18■□□□□ 0.98
RAB40C-208ENST00000564703 GNAT3A8MTJ3 354 aa21.17■□□□□ 0.98
RAB40C-208ENST00000564703 MRS2Q9HD23 443 aa21.17■□□□□ 0.98
RAB40C-208ENST00000564703 RTF1Q92541 710 aaKnown RBP21.16■□□□□ 0.98
RAB40C-208ENST00000564703 ADAMTS8Q9UP79 889 aa21.16■□□□□ 0.98
RAB40C-208ENST00000564703 SMARCC1Q92922 1105 aaPredicted RBP21.15■□□□□ 0.98
RAB40C-208ENST00000564703 DIEXFQ68CQ4 756 aaKnown RBP21.14■□□□□ 0.97
RAB40C-208ENST00000564703 PIGBQ92521 554 aa21.14■□□□□ 0.97
RAB40C-208ENST00000564703 TNS1Q9HBL0 1735 aaKnown RBP21.14■□□□□ 0.97
RAB40C-208ENST00000564703 NHSQ6T4R5 1651 aa21.14■□□□□ 0.97
RAB40C-208ENST00000564703 RNMTO43148 476 aaKnown RBP21.13■□□□□ 0.97
RAB40C-208ENST00000564703 TXNRD1Q16881 649 aa21.13■□□□□ 0.97
RAB40C-208ENST00000564703 NBPF14Q5TI25 921 aa21.13■□□□□ 0.97
RAB40C-208ENST00000564703 PLEKHF1Q96S99 279 aa21.13■□□□□ 0.97
RAB40C-208ENST00000564703 LGR6Q9HBX8 967 aa21.13■□□□□ 0.97
RAB40C-208ENST00000564703 DOT1LQ8TEK3 1739 aa21.12■□□□□ 0.97
RAB40C-208ENST00000564703 HMGB2P26583 209 aaKnown RBP21.12■□□□□ 0.97
RAB40C-208ENST00000564703 NFATC2IPQ8NCF5 419 aa21.12■□□□□ 0.97
RAB40C-208ENST00000564703 MAP3K5Q99683 1374 aa21.11■□□□□ 0.97
RAB40C-208ENST00000564703 CCDC184Q52MB2 194 aa21.11■□□□□ 0.97
RAB40C-208ENST00000564703 RUNDC1Q96C34 613 aa21.11■□□□□ 0.97
RAB40C-208ENST00000564703 HTATSF1O43719 755 aaKnown RBP21.1■□□□□ 0.97
RAB40C-208ENST00000564703 TEFQ10587 303 aa21.1■□□□□ 0.97
RAB40C-208ENST00000564703 CCDC146Q8IYE0 955 aa21.1■□□□□ 0.97
RAB40C-208ENST00000564703 BTAF1O14981 1849 aa21.1■□□□□ 0.97
RAB40C-208ENST00000564703 NFE2L2Q16236 605 aa21.09■□□□□ 0.97
RAB40C-208ENST00000564703 SLC27A3Q5K4L6 730 aa21.09■□□□□ 0.97
RAB40C-208ENST00000564703 SLC52A2Q9HAB3 445 aa21.09■□□□□ 0.97
RAB40C-208ENST00000564703 ITGB4P16144 1822 aa21.08■□□□□ 0.97
RAB40C-208ENST00000564703 KDM6AO15550 1401 aaPredicted RBP21.08■□□□□ 0.97
RAB40C-208ENST00000564703 PROM2Q8N271 834 aa21.08■□□□□ 0.97
RAB40C-208ENST00000564703 IL17REQ8NFR9 667 aa21.08■□□□□ 0.97
RAB40C-208ENST00000564703 PNISRQ8TF01 805 aaKnown RBP21.07■□□□□ 0.96
RAB40C-208ENST00000564703 CCNL1Q9UK58 526 aaPredicted RBP21.07■□□□□ 0.96
RAB40C-208ENST00000564703 ASAP1Q9ULH1 1129 aa21.07■□□□□ 0.96
RAB40C-208ENST00000564703 RIPK4P57078 832 aa21.06■□□□□ 0.96
RAB40C-208ENST00000564703 ATG3Q9NT62 314 aa21.06■□□□□ 0.96
RAB40C-208ENST00000564703 NEUROD2Q15784 382 aa21.05■□□□□ 0.96
RAB40C-208ENST00000564703 PALLDQ8WX93 1383 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms