RNA–Protein interactions for RNA: ENST00000564647.5

RPL4-207, Transcript of ribosomal protein L4, humanhuman

TSL 2

Gene RPL4, Length 1,110 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-207ENST00000564647 USP17L11C9JVI0 530 aa10.96□□□□□ -0.65
RPL4-207ENST00000564647 USP17L21D6R901 530 aa10.96□□□□□ -0.65
RPL4-207ENST00000564647 USP17L18D6R9N7 530 aa10.96□□□□□ -0.65
RPL4-207ENST00000564647 USP17L22D6RA61 530 aa10.96□□□□□ -0.65
RPL4-207ENST00000564647 USP17L17D6RBQ6 530 aa10.96□□□□□ -0.65
RPL4-207ENST00000564647 USP17L19D6RCP7 530 aa10.96□□□□□ -0.65
RPL4-207ENST00000564647 USP17L20D6RJB6 530 aa10.96□□□□□ -0.65
RPL4-207ENST00000564647 ERVH48-1M5A8F1 160 aa10.96□□□□□ -0.65
RPL4-207ENST00000564647 FSHRP23945 695 aa10.96□□□□□ -0.65
RPL4-207ENST00000564647 GRM5P41594 1212 aa10.96□□□□□ -0.65
RPL4-207ENST00000564647 USP17L24Q0WX57 530 aa10.96□□□□□ -0.65
RPL4-207ENST00000564647 ZMIZ1Q9ULJ6 1067 aa10.96□□□□□ -0.65
RPL4-207ENST00000564647 NOD1Q9Y239 953 aa10.96□□□□□ -0.65
RPL4-207ENST00000564647 FAM196BA6NMK8 535 aa10.95□□□□□ -0.66
RPL4-207ENST00000564647 CLDN10P78369 228 aa10.95□□□□□ -0.66
RPL4-207ENST00000564647 LARP1Q6PKG0 1096 aaKnown RBP10.95□□□□□ -0.66
RPL4-207ENST00000564647 OGFOD1Q8N543 542 aa10.95□□□□□ -0.66
RPL4-207ENST00000564647 NOVA2Q9UNW9 492 aaKnown RBP10.95□□□□□ -0.66
RPL4-207ENST00000564647 PTK7Q13308 1070 aa10.94□□□□□ -0.66
RPL4-207ENST00000564647 ELOAQ14241 798 aaKnown RBP10.94□□□□□ -0.66
RPL4-207ENST00000564647 MPNDQ8N594 471 aa10.94□□□□□ -0.66
RPL4-207ENST00000564647 STK32AQ8WU08 396 aa10.94□□□□□ -0.66
RPL4-207ENST00000564647 USTQ9Y2C2 406 aa10.94□□□□□ -0.66
RPL4-207ENST00000564647 TMEM88BA6NKF7 163 aa10.93□□□□□ -0.66
RPL4-207ENST00000564647 TRIM26Q12899 539 aaPredicted RBP10.93□□□□□ -0.66
RPL4-207ENST00000564647 HPS1Q92902 700 aa10.93□□□□□ -0.66
RPL4-207ENST00000564647 ZNF594Q96JF6 807 aaPredicted RBP10.93□□□□□ -0.66
RPL4-207ENST00000564647 TMPRSS4Q9NRS4 437 aa10.93□□□□□ -0.66
RPL4-207ENST00000564647 ADH1CP00326 375 aa10.92□□□□□ -0.66
RPL4-207ENST00000564647 SCTRP47872 440 aa10.92□□□□□ -0.66
RPL4-207ENST00000564647 GTF2IP78347 998 aa10.92□□□□□ -0.66
RPL4-207ENST00000564647 USP4Q13107 963 aa10.92□□□□□ -0.66
RPL4-207ENST00000564647 TMEM164Q5U3C3 297 aa10.92□□□□□ -0.66
RPL4-207ENST00000564647 TRIM50Q86XT4 487 aa10.92□□□□□ -0.66
RPL4-207ENST00000564647 CCDC125Q86Z20 511 aa10.92□□□□□ -0.66
RPL4-207ENST00000564647 DNAAF2Q9NVR5 837 aaKnown RBP10.92□□□□□ -0.66
RPL4-207ENST00000564647 KIAA1024Q9UPX6 916 aa10.92□□□□□ -0.66
RPL4-207ENST00000564647 ZBTB7BO15156 539 aaPredicted RBP10.91□□□□□ -0.66
RPL4-207ENST00000564647 PDE4CQ08493 712 aa10.91□□□□□ -0.66
RPL4-207ENST00000564647 ATP1A2P50993 1020 aa10.9□□□□□ -0.66
RPL4-207ENST00000564647 ANKMY2Q8IV38 441 aa10.9□□□□□ -0.66
RPL4-207ENST00000564647 PCDHGA11Q9Y5H2 935 aa10.9□□□□□ -0.66
RPL4-207ENST00000564647 POTECB2RU33 542 aa10.89□□□□□ -0.67
RPL4-207ENST00000564647 NR3C2P08235 984 aa10.89□□□□□ -0.67
RPL4-207ENST00000564647 DPYDQ12882 1025 aa10.89□□□□□ -0.67
RPL4-207ENST00000564647 SIRT1Q96EB6 747 aa10.89□□□□□ -0.67
RPL4-207ENST00000564647 ATP13A2Q9NQ11 1180 aa10.89□□□□□ -0.67
RPL4-207ENST00000564647 CYLDQ9NQC7 956 aa10.89□□□□□ -0.67
RPL4-207ENST00000564647 GMPR2Q9P2T1 348 aaKnown RBP10.89□□□□□ -0.67
RPL4-207ENST00000564647 DACH1Q9UI36 760 aa10.89□□□□□ -0.67
RPL4-207ENST00000564647 C11orf95C9JLR9 678 aaPredicted RBP10.88□□□□□ -0.67
RPL4-207ENST00000564647 MYCP01106 439 aaPredicted RBP10.88□□□□□ -0.67
RPL4-207ENST00000564647 NR5A1Q13285 461 aa10.88□□□□□ -0.67
RPL4-207ENST00000564647 PPP1R26Q5T8A7 1209 aaPredicted RBP10.88□□□□□ -0.67
RPL4-207ENST00000564647 AEBP1Q8IUX7 1158 aa10.88□□□□□ -0.67
RPL4-207ENST00000564647 CCDC116Q8IYX3 515 aa10.88□□□□□ -0.67
RPL4-207ENST00000564647 LARGE2Q8N3Y3 721 aa10.88□□□□□ -0.67
RPL4-207ENST00000564647 ZNF784Q8NCA9 323 aaPredicted RBP10.88□□□□□ -0.67
RPL4-207ENST00000564647 FAM200AQ8TCP9 573 aa10.88□□□□□ -0.67
RPL4-207ENST00000564647 DKK1O94907 266 aa10.87□□□□□ -0.67
RPL4-207ENST00000564647 ERVK-9P63128 1117 aa10.87□□□□□ -0.67
RPL4-207ENST00000564647 PSME1Q06323 249 aa10.87□□□□□ -0.67
RPL4-207ENST00000564647 DHX9Q08211 1270 aaKnown RBP10.87□□□□□ -0.67
RPL4-207ENST00000564647 SENP2Q9HC62 589 aa10.87□□□□□ -0.67
RPL4-207ENST00000564647 CCDC102BQ68D86 513 aa10.86□□□□□ -0.67
RPL4-207ENST00000564647 CC2D2BQ6DHV5 1058 aa10.86□□□□□ -0.67
RPL4-207ENST00000564647 SIX5Q8N196 739 aa10.86□□□□□ -0.67
RPL4-207ENST00000564647 TPCN2Q8NHX9 752 aa10.86□□□□□ -0.67
RPL4-207ENST00000564647 NNTQ13423 1086 aa10.85□□□□□ -0.67
RPL4-207ENST00000564647 ZNF775Q96BV0 537 aaPredicted RBP10.85□□□□□ -0.67
RPL4-207ENST00000564647 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
RPL4-207ENST00000564647 CAPN5O15484 640 aaPredicted RBP10.84□□□□□ -0.67
RPL4-207ENST00000564647 FAM69CQ0P6D2 419 aa10.84□□□□□ -0.67
RPL4-207ENST00000564647 KCTD17Q8N5Z5 321 aa10.84□□□□□ -0.67
RPL4-207ENST00000564647 KIFC2Q96AC6 838 aa10.84□□□□□ -0.67
RPL4-207ENST00000564647 OSBPL3Q9H4L5 887 aa10.84□□□□□ -0.67
RPL4-207ENST00000564647 SFI1A8K8P3 1242 aa10.83□□□□□ -0.68
RPL4-207ENST00000564647 LILRA1O75019 489 aa10.83□□□□□ -0.68
RPL4-207ENST00000564647 SLAIN2Q9P270 581 aa10.83□□□□□ -0.68
RPL4-207ENST00000564647 STAU1O95793 577 aaKnown RBP10.82□□□□□ -0.68
RPL4-207ENST00000564647 ZBTB7CA1YPR0 619 aa10.81□□□□□ -0.68
RPL4-207ENST00000564647 ADD1P35611 737 aaKnown RBP10.81□□□□□ -0.68
RPL4-207ENST00000564647 SEC13P55735 322 aa10.81□□□□□ -0.68
RPL4-207ENST00000564647 TRIM47Q96LD4 638 aa10.81□□□□□ -0.68
RPL4-207ENST00000564647 RBM19Q9Y4C8 960 aaKnown RBP10.81□□□□□ -0.68
RPL4-207ENST00000564647 EMILIN1Q9Y6C2 1016 aa10.81□□□□□ -0.68
RPL4-207ENST00000564647 BRD1O95696 1058 aa10.8□□□□□ -0.68
RPL4-207ENST00000564647 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.8□□□□□ -0.68
RPL4-207ENST00000564647 PGPEP1Q9NXJ5 209 aa10.8□□□□□ -0.68
RPL4-207ENST00000564647 LGR5O75473 907 aa10.79□□□□□ -0.68
RPL4-207ENST00000564647 BMP1P13497 986 aa10.79□□□□□ -0.68
RPL4-207ENST00000564647 TMEM229AB2RXF0 380 aa10.78□□□□□ -0.68
RPL4-207ENST00000564647 SCNN1DP51172 638 aa10.77□□□□□ -0.69
RPL4-207ENST00000564647 WDR4P57081 412 aaKnown RBP10.77□□□□□ -0.69
RPL4-207ENST00000564647 CLP1Q92989 425 aaKnown RBP10.77□□□□□ -0.69
RPL4-207ENST00000564647 TRIM52Q96A61 297 aa10.77□□□□□ -0.69
RPL4-207ENST00000564647 ITPKCQ96DU7 683 aa10.77□□□□□ -0.69
RPL4-207ENST00000564647 ZNF358Q9NW07 568 aa10.77□□□□□ -0.69
RPL4-207ENST00000564647 PODXL2Q9NZ53 605 aa10.77□□□□□ -0.69
RPL4-207ENST00000564647 GDF10P55107 478 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms