RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-208ENST00000564634 RGPD2P0DJD1 1756 aa35.15■■■■□ 3.22
CYLD-208ENST00000564634 SLC27A3Q5K4L6 730 aa35.14■■■■□ 3.22
CYLD-208ENST00000564634 SHANK3Q9BYB0 1731 aa35.14■■■■□ 3.22
CYLD-208ENST00000564634 MAP3K19Q56UN5 1328 aa35.13■■■■□ 3.21
CYLD-208ENST00000564634 FBLN1P23142 703 aa35.13■■■■□ 3.21
CYLD-208ENST00000564634 PNPLA7Q6ZV29 1317 aa35.12■■■■□ 3.21
CYLD-208ENST00000564634 CDCA8Q53HL2 280 aa35.12■■■■□ 3.21
CYLD-208ENST00000564634 COG3Q96JB2 828 aa35.12■■■■□ 3.21
CYLD-208ENST00000564634 HOXC9P31274 260 aa35.11■■■■□ 3.21
CYLD-208ENST00000564634 PRIM1P49642 420 aaKnown RBP35.11■■■■□ 3.21
CYLD-208ENST00000564634 ANKRD36BQ8N2N9 1353 aa35.11■■■■□ 3.21
CYLD-208ENST00000564634 MEGF6O75095 1541 aa35.11■■■■□ 3.21
CYLD-208ENST00000564634 AMPHP49418 695 aa35.1■■■■□ 3.21
CYLD-208ENST00000564634 GPR162Q16538 588 aa35.1■■■■□ 3.21
CYLD-208ENST00000564634 NSD2O96028 1365 aa35.1■■■■□ 3.21
CYLD-208ENST00000564634 EIF4G2P78344 907 aaKnown RBP eCLIP35.09■■■■□ 3.21
CYLD-208ENST00000564634 TFCP2L1Q9NZI6 479 aa35.09■■■■□ 3.21
CYLD-208ENST00000564634 LY75O60449 1722 aa35.09■■■■□ 3.21
CYLD-208ENST00000564634 POLD1P28340 1107 aa35.08■■■■□ 3.21
CYLD-208ENST00000564634 SLC16A10Q8TF71 515 aa35.08■■■■□ 3.21
CYLD-208ENST00000564634 COL24A1Q17RW2 1714 aa35.07■■■■□ 3.2
CYLD-208ENST00000564634 PELP1Q8IZL8 1130 aaKnown RBP35.06■■■■□ 3.2
CYLD-208ENST00000564634 GOLGB1Q14789 3259 aaKnown RBP35.05■■■■□ 3.2
CYLD-208ENST00000564634 ZCRB1Q8TBF4 217 aaKnown RBP35.05■■■■□ 3.2
CYLD-208ENST00000564634 HSPA5P11021 654 aaKnown RBP35.02■■■■□ 3.2
CYLD-208ENST00000564634 RRS1Q15050 365 aaKnown RBP35■■■■□ 3.19
CYLD-208ENST00000564634 NLGN2Q8NFZ4 835 aa35■■■■□ 3.19
CYLD-208ENST00000564634 CCNL1Q9UK58 526 aaPredicted RBP35■■■■□ 3.19
CYLD-208ENST00000564634 RTL1A6NKG5 1358 aa35■■■■□ 3.19
CYLD-208ENST00000564634 SENP3-EIF4A1A0A087X0R7 540 aa34.99■■■■□ 3.19
CYLD-208ENST00000564634 USHBP1Q8N6Y0 703 aa34.99■■■■□ 3.19
CYLD-208ENST00000564634 MSH5O43196 834 aa34.96■■■■□ 3.19
CYLD-208ENST00000564634 C1QTNF8P60827 252 aa34.96■■■■□ 3.19
CYLD-208ENST00000564634 NBPF6Q5VWK0 638 aa34.96■■■■□ 3.19
CYLD-208ENST00000564634 NBPF4Q96M43 638 aa34.96■■■■□ 3.19
CYLD-208ENST00000564634 GGNBP2Q9H3C7 697 aa34.94■■■■□ 3.18
CYLD-208ENST00000564634 SMG6Q86US8 1419 aaKnown RBP34.93■■■■□ 3.18
CYLD-208ENST00000564634 MSL1Q68DK7 614 aa34.9■■■■□ 3.18
CYLD-208ENST00000564634 COL23A1Q86Y22 540 aaPredicted RBP34.9■■■■□ 3.18
CYLD-208ENST00000564634 RAPGEF4Q8WZA2 1011 aa34.9■■■■□ 3.18
CYLD-208ENST00000564634 C5P01031 1676 aa34.89■■■■□ 3.18
CYLD-208ENST00000564634 FYB1O15117 783 aa34.88■■■■□ 3.17
CYLD-208ENST00000564634 KIF20BQ96Q89 1820 aa34.87■■■■□ 3.17
CYLD-208ENST00000564634 CGNL1Q0VF96 1302 aa34.86■■■■□ 3.17
CYLD-208ENST00000564634 TATP17735 454 aaPredicted RBP34.85■■■■□ 3.17
CYLD-208ENST00000564634 GIGYF1O75420 1035 aaPredicted RBP34.84■■■■□ 3.17
CYLD-208ENST00000564634 YBX3P16989 372 aaKnown RBP eCLIP34.84■■■■□ 3.17
CYLD-208ENST00000564634 HSP90AB2PQ58FF8 381 aa34.83■■■■□ 3.17
CYLD-208ENST00000564634 PCDH11XQ9BZA7 1347 aa34.82■■■■□ 3.17
CYLD-208ENST00000564634 PCDH11YQ9BZA8 1340 aa34.82■■■■□ 3.17
CYLD-208ENST00000564634 POLR3GLQ9BT43 218 aa34.81■■■■□ 3.16
CYLD-208ENST00000564634 INSRP06213 1382 aa34.81■■■■□ 3.16
CYLD-208ENST00000564634 PALLDQ8WX93 1383 aa34.8■■■■□ 3.16
CYLD-208ENST00000564634 TOGARAM1Q9Y4F4 1720 aa34.8■■■■□ 3.16
CYLD-208ENST00000564634 TAF1LQ8IZX4 1826 aa34.79■■■■□ 3.16
CYLD-208ENST00000564634 FLT4P35916 1363 aa34.79■■■■□ 3.16
CYLD-208ENST00000564634 MPRIPQ6WCQ1 1025 aa34.78■■■■□ 3.16
CYLD-208ENST00000564634 GRIN3BO60391 1043 aa34.75■■■■□ 3.15
CYLD-208ENST00000564634 CARD14Q9BXL6 1004 aa34.74■■■■□ 3.15
CYLD-208ENST00000564634 C4BP0C0L5 1744 aa34.74■■■■□ 3.15
CYLD-208ENST00000564634 CYP27B1O15528 508 aa34.73■■■■□ 3.15
CYLD-208ENST00000564634 ITGB4P16144 1822 aa34.73■■■■□ 3.15
CYLD-208ENST00000564634 PKD1L3Q7Z443 1732 aa34.72■■■■□ 3.15
CYLD-208ENST00000564634 EMILIN1Q9Y6C2 1016 aa34.71■■■■□ 3.15
CYLD-208ENST00000564634 KIF24Q5T7B8 1368 aa34.7■■■■□ 3.15
CYLD-208ENST00000564634 AMIGO3Q86WK7 504 aa34.69■■■■□ 3.14
CYLD-208ENST00000564634 NSD3Q9BZ95 1437 aa34.69■■■■□ 3.14
CYLD-208ENST00000564634 FLAD1Q8NFF5 587 aa34.68■■■■□ 3.14
CYLD-208ENST00000564634 AK7Q96M32 723 aa34.68■■■■□ 3.14
CYLD-208ENST00000564634 ATP10DQ9P241 1426 aa34.66■■■■□ 3.14
CYLD-208ENST00000564634 PHF14O94880 888 aa34.66■■■■□ 3.14
CYLD-208ENST00000564634 SMIM5Q71RC9 77 aa34.66■■■■□ 3.14
CYLD-208ENST00000564634 CD2APQ9Y5K6 639 aa34.66■■■■□ 3.14
CYLD-208ENST00000564634 CEP350Q5VT06 3117 aa34.65■■■■□ 3.14
CYLD-208ENST00000564634 PPM1GO15355 546 aaPredicted RBP34.65■■■■□ 3.14
CYLD-208ENST00000564634 UBR3Q6ZT12 1888 aa34.65■■■■□ 3.14
CYLD-208ENST00000564634 SMARCC1Q92922 1105 aaPredicted RBP34.64■■■■□ 3.14
CYLD-208ENST00000564634 ANKRD26Q9UPS8 1709 aa34.62■■■■□ 3.13
CYLD-208ENST00000564634 PIGBQ92521 554 aa34.62■■■■□ 3.13
CYLD-208ENST00000564634 HMGB2P26583 209 aaKnown RBP34.61■■■■□ 3.13
CYLD-208ENST00000564634 PANK3Q9H999 370 aa34.61■■■■□ 3.13
CYLD-208ENST00000564634 WWC3Q9ULE0 1092 aa34.61■■■■□ 3.13
CYLD-208ENST00000564634 NCAPD2Q15021 1401 aa34.61■■■■□ 3.13
CYLD-208ENST00000564634 KIF7Q2M1P5 1343 aa34.6■■■■□ 3.13
CYLD-208ENST00000564634 MAP2P11137 1827 aaKnown RBP34.58■■■■□ 3.13
CYLD-208ENST00000564634 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.58■■■■□ 3.13
CYLD-208ENST00000564634 SPG7Q9UQ90 795 aa34.57■■■■□ 3.12
CYLD-208ENST00000564634 LINC00116Q8NCU8 138 aa34.56■■■■□ 3.12
CYLD-208ENST00000564634 IGSF1Q8N6C5 1336 aa34.55■■■■□ 3.12
CYLD-208ENST00000564634 LOC102724428A0A0B4J2F2 783 aa34.54■■■■□ 3.12
CYLD-208ENST00000564634 SIK1P57059 783 aa34.54■■■■□ 3.12
CYLD-208ENST00000564634 NKX1-1Q15270 411 aaPredicted RBP34.54■■■■□ 3.12
CYLD-208ENST00000564634 ZNF526Q8TF50 670 aaPredicted RBP34.54■■■■□ 3.12
CYLD-208ENST00000564634 TMOD3Q9NYL9 352 aa34.53■■■■□ 3.12
CYLD-208ENST00000564634 ADCY9O60503 1353 aa34.52■■■■□ 3.12
CYLD-208ENST00000564634 EYA1Q99502 592 aa34.52■■■■□ 3.12
CYLD-208ENST00000564634 GPBP1L1Q9HC44 474 aaPredicted RBP34.52■■■■□ 3.12
CYLD-208ENST00000564634 SSFA2P28290 1259 aa34.51■■■■□ 3.12
CYLD-208ENST00000564634 ASAP1Q9ULH1 1129 aa34.5■■■■□ 3.11
CYLD-208ENST00000564634 WASHC2AQ641Q2 1341 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms