RNA–Protein interactions for RNA: ENST00000564278.1

NUP93-209, Transcript of nucleoporin 93, humanhuman

TSL 2

Gene NUP93, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-209ENST00000564278 CICQ96RK0 1608 aaPredicted RBP9.53□□□□□ -0.88
NUP93-209ENST00000564278 KIF3CO14782 793 aa9.53□□□□□ -0.88
NUP93-209ENST00000564278 GRIN3BO60391 1043 aa9.53□□□□□ -0.88
NUP93-209ENST00000564278 WDR90Q96KV7 1748 aa9.53□□□□□ -0.88
NUP93-209ENST00000564278 RGPD2P0DJD1 1756 aa9.52□□□□□ -0.88
NUP93-209ENST00000564278 MEGF6O75095 1541 aa9.52□□□□□ -0.88
NUP93-209ENST00000564278 CAPN15O75808 1086 aa9.52□□□□□ -0.89
NUP93-209ENST00000564278 SLC27A3Q5K4L6 730 aa9.52□□□□□ -0.89
NUP93-209ENST00000564278 COL23A1Q86Y22 540 aaPredicted RBP9.52□□□□□ -0.89
NUP93-209ENST00000564278 KCNH5Q8NCM2 988 aa9.52□□□□□ -0.89
NUP93-209ENST00000564278 CD163L1Q9NR16 1453 aa9.52□□□□□ -0.89
NUP93-209ENST00000564278 TAF1LQ8IZX4 1826 aa9.52□□□□□ -0.89
NUP93-209ENST00000564278 AMIGO3Q86WK7 504 aa9.51□□□□□ -0.89
NUP93-209ENST00000564278 NME9Q86XW9 330 aa9.51□□□□□ -0.89
NUP93-209ENST00000564278 ANKRD24Q8TF21 1146 aa9.51□□□□□ -0.89
NUP93-209ENST00000564278 SYTL4Q96C24 671 aaPredicted RBP9.51□□□□□ -0.89
NUP93-209ENST00000564278 KIAA1551Q9HCM1 1747 aa9.51□□□□□ -0.89
NUP93-209ENST00000564278 ANKRD36BQ8N2N9 1353 aa9.5□□□□□ -0.89
NUP93-209ENST00000564278 POTEHQ6S545 545 aa9.5□□□□□ -0.89
NUP93-209ENST00000564278 CCNL1Q9UK58 526 aaPredicted RBP9.5□□□□□ -0.89
NUP93-209ENST00000564278 TTC21AQ8NDW8 1320 aa9.5□□□□□ -0.89
NUP93-209ENST00000564278 KTN1Q86UP2 1357 aaKnown RBP9.5□□□□□ -0.89
NUP93-209ENST00000564278 SBNO2Q9Y2G9 1366 aa9.5□□□□□ -0.89
NUP93-209ENST00000564278 PRIM1P49642 420 aaKnown RBP9.49□□□□□ -0.89
NUP93-209ENST00000564278 HTRA3P83110 453 aa9.49□□□□□ -0.89
NUP93-209ENST00000564278 COL13A1Q5TAT6 717 aaPredicted RBP9.49□□□□□ -0.89
NUP93-209ENST00000564278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.49□□□□□ -0.89
NUP93-209ENST00000564278 DDX54Q8TDD1 881 aaKnown RBP9.49□□□□□ -0.89
NUP93-209ENST00000564278 STAC3Q96MF2 364 aa9.49□□□□□ -0.89
NUP93-209ENST00000564278 IGSF1Q8N6C5 1336 aa9.49□□□□□ -0.89
NUP93-209ENST00000564278 UBR3Q6ZT12 1888 aa9.49□□□□□ -0.89
NUP93-209ENST00000564278 USP31Q70CQ4 1352 aa9.49□□□□□ -0.89
NUP93-209ENST00000564278 C4BP0C0L5 1744 aa9.48□□□□□ -0.89
NUP93-209ENST00000564278 SMIM5Q71RC9 77 aa9.48□□□□□ -0.89
NUP93-209ENST00000564278 DNAJC5GQ8N7S2 189 aa9.48□□□□□ -0.89
NUP93-209ENST00000564278 MAPK8IP2Q13387 824 aaPredicted RBP9.47□□□□□ -0.89
NUP93-209ENST00000564278 EVC2Q86UK5 1308 aa9.47□□□□□ -0.89
NUP93-209ENST00000564278 APLP1P51693 650 aa9.46□□□□□ -0.9
NUP93-209ENST00000564278 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.9
NUP93-209ENST00000564278 CD2APQ9Y5K6 639 aa9.46□□□□□ -0.9
NUP93-209ENST00000564278 PXDNLA1KZ92 1463 aa9.46□□□□□ -0.9
NUP93-209ENST00000564278 N4BP2Q86UW6 1770 aaPredicted RBP9.45□□□□□ -0.9
NUP93-209ENST00000564278 NMRK2Q9NPI5 230 aa9.45□□□□□ -0.9
NUP93-209ENST00000564278 PALLDQ8WX93 1383 aa9.44□□□□□ -0.9
NUP93-209ENST00000564278 USP47Q96K76 1375 aa9.44□□□□□ -0.9
NUP93-209ENST00000564278 PKD1L3Q7Z443 1732 aa9.44□□□□□ -0.9
NUP93-209ENST00000564278 KIF13BQ9NQT8 1826 aa9.44□□□□□ -0.9
NUP93-209ENST00000564278 A0A1W2PP64 1363 aa9.43□□□□□ -0.9
NUP93-209ENST00000564278 PHF14O94880 888 aa9.43□□□□□ -0.9
NUP93-209ENST00000564278 TRIM26Q12899 539 aaPredicted RBP9.43□□□□□ -0.9
NUP93-209ENST00000564278 BRCA1P38398 1863 aaKnown RBP9.42□□□□□ -0.9
NUP93-209ENST00000564278 MAP2P11137 1827 aaKnown RBP9.42□□□□□ -0.9
NUP93-209ENST00000564278 ITGB4P16144 1822 aa9.42□□□□□ -0.9
NUP93-209ENST00000564278 EDC4Q6P2E9 1401 aaKnown RBP9.42□□□□□ -0.9
NUP93-209ENST00000564278 USHBP1Q8N6Y0 703 aa9.42□□□□□ -0.9
NUP93-209ENST00000564278 ZNF692Q9BU19 519 aaPredicted RBP9.42□□□□□ -0.9
NUP93-209ENST00000564278 MAP3K19Q56UN5 1328 aa9.41□□□□□ -0.9
NUP93-209ENST00000564278 FBLN1P23142 703 aa9.41□□□□□ -0.9
NUP93-209ENST00000564278 TNS4Q8IZW8 715 aa9.41□□□□□ -0.9
NUP93-209ENST00000564278 KLRG1Q96E93 195 aa9.41□□□□□ -0.9
NUP93-209ENST00000564278 FOXD4L1Q9NU39 408 aa9.41□□□□□ -0.9
NUP93-209ENST00000564278 KCPQ6ZWJ8 1503 aa9.41□□□□□ -0.9
NUP93-209ENST00000564278 ROCK2O75116 1388 aaKnown RBP9.4□□□□□ -0.9
NUP93-209ENST00000564278 TOMM70O94826 608 aa9.4□□□□□ -0.9
NUP93-209ENST00000564278 IP6K1Q92551 441 aa9.4□□□□□ -0.9
NUP93-209ENST00000564278 C10orf71Q711Q0 1435 aa9.39□□□□□ -0.91
NUP93-209ENST00000564278 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.39□□□□□ -0.91
NUP93-209ENST00000564278 HOXC9P31274 260 aa9.39□□□□□ -0.91
NUP93-209ENST00000564278 PRELPP51888 382 aa9.39□□□□□ -0.91
NUP93-209ENST00000564278 JMYQ8N9B5 988 aa9.39□□□□□ -0.91
NUP93-209ENST00000564278 ZCRB1Q8TBF4 217 aaKnown RBP9.39□□□□□ -0.91
NUP93-209ENST00000564278 LINC00116Q8NCU8 138 aa9.38□□□□□ -0.91
NUP93-209ENST00000564278 AK7Q96M32 723 aa9.38□□□□□ -0.91
NUP93-209ENST00000564278 TNRC6CQ9HCJ0 1690 aaKnown RBP9.38□□□□□ -0.91
NUP93-209ENST00000564278 C4AP0C0L4 1744 aa9.37□□□□□ -0.91
NUP93-209ENST00000564278 NBPF6Q5VWK0 638 aa9.37□□□□□ -0.91
NUP93-209ENST00000564278 L3MBTL2Q969R5 705 aa9.37□□□□□ -0.91
NUP93-209ENST00000564278 NBPF4Q96M43 638 aa9.37□□□□□ -0.91
NUP93-209ENST00000564278 PCGF6Q9BYE7 350 aa9.37□□□□□ -0.91
NUP93-209ENST00000564278 SLC12A5Q9H2X9 1139 aa9.37□□□□□ -0.91
NUP93-209ENST00000564278 ARFGEF1Q9Y6D6 1849 aa9.37□□□□□ -0.91
NUP93-209ENST00000564278 MMP10P09238 476 aa9.36□□□□□ -0.91
NUP93-209ENST00000564278 MPRIPQ6WCQ1 1025 aa9.36□□□□□ -0.91
NUP93-209ENST00000564278 RBM46Q8TBY0 533 aaKnown RBP9.36□□□□□ -0.91
NUP93-209ENST00000564278 TMC1Q8TDI8 760 aa9.36□□□□□ -0.91
NUP93-209ENST00000564278 BCS1LQ9Y276 419 aa9.36□□□□□ -0.91
NUP93-209ENST00000564278 RTL1A6NKG5 1358 aa9.36□□□□□ -0.91
NUP93-209ENST00000564278 PCDH11XQ9BZA7 1347 aa9.35□□□□□ -0.91
NUP93-209ENST00000564278 PCDH11YQ9BZA8 1340 aa9.35□□□□□ -0.91
NUP93-209ENST00000564278 A0A0G2JLW4 131 aa9.35□□□□□ -0.91
NUP93-209ENST00000564278 CYP27B1O15528 508 aa9.35□□□□□ -0.91
NUP93-209ENST00000564278 RRS1Q15050 365 aaKnown RBP9.35□□□□□ -0.91
NUP93-209ENST00000564278 FLAD1Q8NFF5 587 aa9.35□□□□□ -0.91
NUP93-209ENST00000564278 NSD3Q9BZ95 1437 aa9.35□□□□□ -0.91
NUP93-209ENST00000564278 RNF216Q9NWF9 866 aaPredicted RBP9.35□□□□□ -0.91
NUP93-209ENST00000564278 GNPATO15228 680 aa9.34□□□□□ -0.91
NUP93-209ENST00000564278 HSPA1AP0DMV8 641 aaKnown RBP9.34□□□□□ -0.91
NUP93-209ENST00000564278 HSPA1BP0DMV9 641 aaKnown RBP9.34□□□□□ -0.91
NUP93-209ENST00000564278 ITPK1Q13572 414 aa9.34□□□□□ -0.91
NUP93-209ENST00000564278 C9orf131Q5VYM1 1079 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms