RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 PCGF6Q9BYE7 350 aa33.25■■■□□ 2.91
NME3-206ENST00000564252 NSD3Q9BZ95 1437 aa33.25■■■□□ 2.91
NME3-206ENST00000564252 INSRP06213 1382 aa33.24■■■□□ 2.91
NME3-206ENST00000564252 USHBP1Q8N6Y0 703 aa33.24■■■□□ 2.91
NME3-206ENST00000564252 FLT4P35916 1363 aa33.23■■■□□ 2.91
NME3-206ENST00000564252 KIF24Q5T7B8 1368 aa33.23■■■□□ 2.91
NME3-206ENST00000564252 ZNF827Q17R98 1081 aa33.23■■■□□ 2.91
NME3-206ENST00000564252 HSP90AB2PQ58FF8 381 aa33.23■■■□□ 2.91
NME3-206ENST00000564252 NSD2O96028 1365 aa33.22■■■□□ 2.91
NME3-206ENST00000564252 PRIM1P49642 420 aaKnown RBP33.22■■■□□ 2.91
NME3-206ENST00000564252 MTFR1LQ9H019 292 aa33.22■■■□□ 2.91
NME3-206ENST00000564252 CGNL1Q0VF96 1302 aa33.21■■■□□ 2.91
NME3-206ENST00000564252 SLC27A3Q5K4L6 730 aa33.2■■■□□ 2.91
NME3-206ENST00000564252 SYTL4Q96C24 671 aaPredicted RBP33.2■■■□□ 2.91
NME3-206ENST00000564252 SGIP1Q9BQI5 828 aa33.19■■■□□ 2.9
NME3-206ENST00000564252 RAPGEF4Q8WZA2 1011 aa33.18■■■□□ 2.9
NME3-206ENST00000564252 LY75O60449 1722 aa33.17■■■□□ 2.9
NME3-206ENST00000564252 AKT1S1Q96B36 256 aa33.17■■■□□ 2.9
NME3-206ENST00000564252 EMILIN1Q9Y6C2 1016 aa33.16■■■□□ 2.9
NME3-206ENST00000564252 QSER1Q2KHR3 1735 aa33.15■■■□□ 2.9
NME3-206ENST00000564252 ANKRD26Q9UPS8 1709 aa33.14■■■□□ 2.9
NME3-206ENST00000564252 TATP17735 454 aaPredicted RBP33.14■■■□□ 2.9
NME3-206ENST00000564252 DCAF8L1A6NGE4 600 aa33.12■■■□□ 2.89
NME3-206ENST00000564252 KCNQ4P56696 695 aa33.11■■■□□ 2.89
NME3-206ENST00000564252 TUBGCP6Q96RT7 1819 aa33.1■■■□□ 2.89
NME3-206ENST00000564252 YY1P25490 414 aa33.1■■■□□ 2.89
NME3-206ENST00000564252 FHDC1Q9C0D6 1143 aaPredicted RBP33.1■■■□□ 2.89
NME3-206ENST00000564252 PCDH11XQ9BZA7 1347 aa33.08■■■□□ 2.89
NME3-206ENST00000564252 PCDH11YQ9BZA8 1340 aa33.08■■■□□ 2.89
NME3-206ENST00000564252 SYT17Q9BSW7 474 aa33.08■■■□□ 2.89
NME3-206ENST00000564252 NCAPD2Q15021 1401 aa33.08■■■□□ 2.89
NME3-206ENST00000564252 PNPLA7Q6ZV29 1317 aa33.07■■■□□ 2.88
NME3-206ENST00000564252 UTRNP46939 3433 aa33.07■■■□□ 2.88
NME3-206ENST00000564252 PKD1L3Q7Z443 1732 aa33.05■■■□□ 2.88
NME3-206ENST00000564252 MAP2P11137 1827 aaKnown RBP33.05■■■□□ 2.88
NME3-206ENST00000564252 ARXQ96QS3 562 aa33.05■■■□□ 2.88
NME3-206ENST00000564252 PPM1GO15355 546 aaPredicted RBP33.04■■■□□ 2.88
NME3-206ENST00000564252 SLC16A10Q8TF71 515 aa33.04■■■□□ 2.88
NME3-206ENST00000564252 POLR3GLQ9BT43 218 aa33.04■■■□□ 2.88
NME3-206ENST00000564252 CCNL1Q9UK58 526 aaPredicted RBP33.04■■■□□ 2.88
NME3-206ENST00000564252 WASHC2AQ641Q2 1341 aa33.03■■■□□ 2.88
NME3-206ENST00000564252 COL24A1Q17RW2 1714 aa33.03■■■□□ 2.88
NME3-206ENST00000564252 CYP27B1O15528 508 aa33.03■■■□□ 2.88
NME3-206ENST00000564252 TFCP2L1Q9NZI6 479 aa33.03■■■□□ 2.88
NME3-206ENST00000564252 EIF4G2P78344 907 aaKnown RBP eCLIP33.01■■■□□ 2.87
NME3-206ENST00000564252 TOGARAM1Q9Y4F4 1720 aa33.01■■■□□ 2.87
NME3-206ENST00000564252 MAP3K5Q99683 1374 aa33■■■□□ 2.87
NME3-206ENST00000564252 HSPA5P11021 654 aaKnown RBP33■■■□□ 2.87
NME3-206ENST00000564252 POLKQ9UBT6 870 aa32.99■■■□□ 2.87
NME3-206ENST00000564252 ITGB4P16144 1822 aa32.96■■■□□ 2.87
NME3-206ENST00000564252 EYA1Q99502 592 aa32.96■■■□□ 2.87
NME3-206ENST00000564252 C5P01031 1676 aa32.95■■■□□ 2.87
NME3-206ENST00000564252 MPRIPQ6WCQ1 1025 aa32.95■■■□□ 2.87
NME3-206ENST00000564252 CCER1Q8TC90 406 aaPredicted RBP32.94■■■□□ 2.86
NME3-206ENST00000564252 PALLDQ8WX93 1383 aa32.94■■■□□ 2.86
NME3-206ENST00000564252 POLD1P28340 1107 aa32.92■■■□□ 2.86
NME3-206ENST00000564252 TNNT2P45379 298 aaPredicted RBP32.91■■■□□ 2.86
NME3-206ENST00000564252 NKX1-1Q15270 411 aaPredicted RBP32.91■■■□□ 2.86
NME3-206ENST00000564252 SPG7Q9UQ90 795 aa32.91■■■□□ 2.86
NME3-206ENST00000564252 TAF1LQ8IZX4 1826 aa32.91■■■□□ 2.86
NME3-206ENST00000564252 PANK3Q9H999 370 aa32.9■■■□□ 2.86
NME3-206ENST00000564252 COL23A1Q86Y22 540 aaPredicted RBP32.89■■■□□ 2.86
NME3-206ENST00000564252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.89■■■□□ 2.86
NME3-206ENST00000564252 EIF4A2Q14240 407 aaKnown RBP32.88■■■□□ 2.85
NME3-206ENST00000564252 PIGBQ92521 554 aa32.86■■■□□ 2.85
NME3-206ENST00000564252 SMARCC1Q92922 1105 aaPredicted RBP32.86■■■□□ 2.85
NME3-206ENST00000564252 MSH5O43196 834 aa32.84■■■□□ 2.85
NME3-206ENST00000564252 GOLGB1Q14789 3259 aaKnown RBP32.83■■■□□ 2.85
NME3-206ENST00000564252 HMGB2P26583 209 aaKnown RBP32.83■■■□□ 2.85
NME3-206ENST00000564252 KLHL34Q8N239 644 aa32.83■■■□□ 2.85
NME3-206ENST00000564252 C4BP0C0L5 1744 aa32.82■■■□□ 2.85
NME3-206ENST00000564252 PHKG2P15735 406 aa32.81■■■□□ 2.84
NME3-206ENST00000564252 PLEKHG2Q9H7P9 1386 aa32.81■■■□□ 2.84
NME3-206ENST00000564252 CHD4Q14839 1912 aa32.81■■■□□ 2.84
NME3-206ENST00000564252 IGSF1Q8N6C5 1336 aa32.8■■■□□ 2.84
NME3-206ENST00000564252 IFNL2Q8IZJ0 200 aa32.8■■■□□ 2.84
NME3-206ENST00000564252 MSL1Q68DK7 614 aa32.77■■■□□ 2.84
NME3-206ENST00000564252 FLAD1Q8NFF5 587 aa32.77■■■□□ 2.84
NME3-206ENST00000564252 NLGN2Q8NFZ4 835 aa32.77■■■□□ 2.84
NME3-206ENST00000564252 TMOD3Q9NYL9 352 aa32.77■■■□□ 2.84
NME3-206ENST00000564252 GPR162Q16538 588 aa32.75■■■□□ 2.83
NME3-206ENST00000564252 UBR3Q6ZT12 1888 aa32.75■■■□□ 2.83
NME3-206ENST00000564252 LOC102724428A0A0B4J2F2 783 aa32.74■■■□□ 2.83
NME3-206ENST00000564252 SIK1P57059 783 aa32.74■■■□□ 2.83
NME3-206ENST00000564252 AMIGO3Q86WK7 504 aa32.74■■■□□ 2.83
NME3-206ENST00000564252 AK7Q96M32 723 aa32.74■■■□□ 2.83
NME3-206ENST00000564252 MORC1Q86VD1 984 aa32.73■■■□□ 2.83
NME3-206ENST00000564252 ZNF784Q8NCA9 323 aaPredicted RBP32.73■■■□□ 2.83
NME3-206ENST00000564252 ASAP1Q9ULH1 1129 aa32.73■■■□□ 2.83
NME3-206ENST00000564252 LINC00116Q8NCU8 138 aa32.7■■■□□ 2.83
NME3-206ENST00000564252 KNSTRNQ9Y448 316 aa32.69■■■□□ 2.82
NME3-206ENST00000564252 SMIM5Q71RC9 77 aa32.68■■■□□ 2.82
NME3-206ENST00000564252 ITPK1Q13572 414 aa32.67■■■□□ 2.82
NME3-206ENST00000564252 PELP1Q8IZL8 1130 aaKnown RBP32.67■■■□□ 2.82
NME3-206ENST00000564252 ATG3Q9NT62 314 aa32.67■■■□□ 2.82
NME3-206ENST00000564252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.66■■■□□ 2.82
NME3-206ENST00000564252 PHF14O94880 888 aa32.66■■■□□ 2.82
NME3-206ENST00000564252 SSFA2P28290 1259 aa32.65■■■□□ 2.82
NME3-206ENST00000564252 PLEKHO1Q53GL0 409 aaPredicted RBP32.65■■■□□ 2.82
NME3-206ENST00000564252 ERVV-2B6SEH9 535 aa32.64■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms