RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 PREX2Q70Z35 1606 aa12.07□□□□□ -0.48
SMG1-209ENST00000563836 PLEKHH2Q8IVE3 1493 aa12.07□□□□□ -0.48
SMG1-209ENST00000563836 TNFRSF10AO00220 468 aa12.06□□□□□ -0.48
SMG1-209ENST00000563836 TSPY4P0CV99 314 aa12.06□□□□□ -0.48
SMG1-209ENST00000563836 TSPY10P0CW01 314 aa12.06□□□□□ -0.48
SMG1-209ENST00000563836 EFCAB2Q5VUJ9 269 aa12.06□□□□□ -0.48
SMG1-209ENST00000563836 PDXDC2PQ6P474 469 aa12.06□□□□□ -0.48
SMG1-209ENST00000563836 SH3BP5LQ7L8J4 393 aa12.06□□□□□ -0.48
SMG1-209ENST00000563836 PNMA1Q8ND90 353 aa12.06□□□□□ -0.48
SMG1-209ENST00000563836 MRGPRX2Q96LB1 330 aa12.06□□□□□ -0.48
SMG1-209ENST00000563836 IRX2Q9BZI1 471 aaPredicted RBP12.06□□□□□ -0.48
SMG1-209ENST00000563836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.06□□□□□ -0.48
SMG1-209ENST00000563836 ZEB1P37275 1124 aaPredicted RBP12.05□□□□□ -0.48
SMG1-209ENST00000563836 SH3RF1Q7Z6J0 888 aa12.05□□□□□ -0.48
SMG1-209ENST00000563836 BPHLQ86WA6 291 aaPredicted RBP12.05□□□□□ -0.48
SMG1-209ENST00000563836 CCER1Q8TC90 406 aaPredicted RBP12.05□□□□□ -0.48
SMG1-209ENST00000563836 FOXJ1Q92949 421 aa12.05□□□□□ -0.48
SMG1-209ENST00000563836 CAMSAP2Q08AD1 1489 aa12.05□□□□□ -0.48
SMG1-209ENST00000563836 ABCC10Q5T3U5 1492 aa12.05□□□□□ -0.48
SMG1-209ENST00000563836 C4orf48Q5BLP8 95 aa12.04□□□□□ -0.48
SMG1-209ENST00000563836 EHBP1Q8NDI1 1231 aa12.04□□□□□ -0.48
SMG1-209ENST00000563836 CDC42BPBQ9Y5S2 1711 aa12.03□□□□□ -0.48
SMG1-209ENST00000563836 MAPKBP1O60336 1514 aa12.03□□□□□ -0.48
SMG1-209ENST00000563836 SIAH2O43255 324 aa12.03□□□□□ -0.48
SMG1-209ENST00000563836 GFRA3O60609 400 aa12.03□□□□□ -0.48
SMG1-209ENST00000563836 VARSP26640 1264 aaKnown RBP12.03□□□□□ -0.48
SMG1-209ENST00000563836 LAPTM4AQ15012 233 aa12.03□□□□□ -0.48
SMG1-209ENST00000563836 NDUFB9Q9Y6M9 179 aa12.03□□□□□ -0.48
SMG1-209ENST00000563836 TTC37Q6PGP7 1564 aa12.03□□□□□ -0.48
SMG1-209ENST00000563836 CFAP74Q9C0B2 1584 aa12.02□□□□□ -0.49
SMG1-209ENST00000563836 DNMT1P26358 1616 aaKnown RBP12.02□□□□□ -0.49
SMG1-209ENST00000563836 NRG2O14511 850 aaPredicted RBP12.02□□□□□ -0.49
SMG1-209ENST00000563836 GPR37L1O60883 481 aa12.02□□□□□ -0.49
SMG1-209ENST00000563836 TOR4AQ9NXH8 423 aa12.02□□□□□ -0.49
SMG1-209ENST00000563836 GPSM3Q9Y4H4 160 aa12.02□□□□□ -0.49
SMG1-209ENST00000563836 PLCH2O75038 1416 aa12.02□□□□□ -0.49
SMG1-209ENST00000563836 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
SMG1-209ENST00000563836 ABCA9Q8IUA7 1624 aa12.01□□□□□ -0.49
SMG1-209ENST00000563836 FLIIQ13045 1269 aa12.01□□□□□ -0.49
SMG1-209ENST00000563836 AGERQ15109 404 aa12.01□□□□□ -0.49
SMG1-209ENST00000563836 SETD5Q9C0A6 1442 aa12.01□□□□□ -0.49
SMG1-209ENST00000563836 CYP4X1Q8N118 509 aa12□□□□□ -0.49
SMG1-209ENST00000563836 SNIP1Q8TAD8 396 aaKnown RBP12□□□□□ -0.49
SMG1-209ENST00000563836 DAPK1P53355 1430 aa12□□□□□ -0.49
SMG1-209ENST00000563836 ADGBQ8N7X0 1667 aa12□□□□□ -0.49
SMG1-209ENST00000563836 PTK2Q05397 1052 aa11.99□□□□□ -0.49
SMG1-209ENST00000563836 OCSTAMPQ9BR26 566 aa11.99□□□□□ -0.49
SMG1-209ENST00000563836 C1QTNF2Q9BXJ5 285 aa11.99□□□□□ -0.49
SMG1-209ENST00000563836 CD109Q6YHK3 1445 aa11.98□□□□□ -0.49
SMG1-209ENST00000563836 ANKRD30AQ9BXX3 1397 aa11.98□□□□□ -0.49
SMG1-209ENST00000563836 MPNDQ8N594 471 aa11.98□□□□□ -0.49
SMG1-209ENST00000563836 FAM174AQ8TBP5 190 aa11.98□□□□□ -0.49
SMG1-209ENST00000563836 ARHGAP9Q9BRR9 750 aa11.98□□□□□ -0.49
SMG1-209ENST00000563836 CHIC2Q9UKJ5 165 aa11.98□□□□□ -0.49
SMG1-209ENST00000563836 CROCC2H7BZ55 1655 aa11.97□□□□□ -0.49
SMG1-209ENST00000563836 ARHGEF5Q12774 1597 aa11.97□□□□□ -0.49
SMG1-209ENST00000563836 CCDC141Q6ZP82 1450 aa11.97□□□□□ -0.49
SMG1-209ENST00000563836 PRM3Q9NNZ6 103 aa11.97□□□□□ -0.49
SMG1-209ENST00000563836 TBC1D2BQ9UPU7 963 aa11.97□□□□□ -0.49
SMG1-209ENST00000563836 AKNAQ7Z591 1439 aa11.96□□□□□ -0.49
SMG1-209ENST00000563836 KIAA1107Q9UPP5 1409 aa11.96□□□□□ -0.49
SMG1-209ENST00000563836 ROCK1Q13464 1354 aa11.96□□□□□ -0.49
SMG1-209ENST00000563836 ZNF644Q9H582 1327 aaPredicted RBP11.96□□□□□ -0.49
SMG1-209ENST00000563836 MAGEB6P1A0A0J9YX57 407 aa11.96□□□□□ -0.49
SMG1-209ENST00000563836 SAMD9LQ8IVG5 1584 aa11.96□□□□□ -0.5
SMG1-209ENST00000563836 FANCAO15360 1455 aa11.95□□□□□ -0.5
SMG1-209ENST00000563836 SHANK2Q9UPX8 1470 aa11.95□□□□□ -0.5
SMG1-209ENST00000563836 GCC2Q8IWJ2 1684 aa11.95□□□□□ -0.5
SMG1-209ENST00000563836 TTC24A2A3L6 582 aaPredicted RBP11.95□□□□□ -0.5
SMG1-209ENST00000563836 HNRNPMP52272 730 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMG1-209ENST00000563836 TRMT44Q8IYL2 757 aaKnown RBP11.95□□□□□ -0.5
SMG1-209ENST00000563836 HFM1A2PYH4 1435 aa11.94□□□□□ -0.5
SMG1-209ENST00000563836 ABCC5O15440 1437 aa11.94□□□□□ -0.5
SMG1-209ENST00000563836 RAB3GAP2Q9H2M9 1393 aa11.94□□□□□ -0.5
SMG1-209ENST00000563836 GLI2P10070 1586 aa11.94□□□□□ -0.5
SMG1-209ENST00000563836 FAM69CQ0P6D2 419 aa11.94□□□□□ -0.5
SMG1-209ENST00000563836 ERFEQ4G0M1 354 aa11.94□□□□□ -0.5
SMG1-209ENST00000563836 CDK15Q96Q40 435 aa11.94□□□□□ -0.5
SMG1-209ENST00000563836 CARD14Q9BXL6 1004 aa11.94□□□□□ -0.5
SMG1-209ENST00000563836 RRP7BPQ9NSQ0 103 aa11.94□□□□□ -0.5
SMG1-209ENST00000563836 TLL2Q9Y6L7 1015 aa11.94□□□□□ -0.5
SMG1-209ENST00000563836 SYCP2Q9BX26 1530 aa11.94□□□□□ -0.5
SMG1-209ENST00000563836 ZBBXA8MT70 800 aa11.93□□□□□ -0.5
SMG1-209ENST00000563836 ZBTB33Q86T24 672 aa11.93□□□□□ -0.5
SMG1-209ENST00000563836 GDPD2Q9HCC8 539 aa11.93□□□□□ -0.5
SMG1-209ENST00000563836 C9orf84Q5VXU9 1444 aa11.93□□□□□ -0.5
SMG1-209ENST00000563836 ADGRL1O94910 1474 aa11.92□□□□□ -0.5
SMG1-209ENST00000563836 TEX14Q8IWB6 1497 aa11.92□□□□□ -0.5
SMG1-209ENST00000563836 J3QL48 77 aa11.92□□□□□ -0.5
SMG1-209ENST00000563836 ALDH1A1P00352 501 aa11.92□□□□□ -0.5
SMG1-209ENST00000563836 FBXO45P0C2W1 286 aa11.92□□□□□ -0.5
SMG1-209ENST00000563836 SMPD1P17405 629 aa11.92□□□□□ -0.5
SMG1-209ENST00000563836 ADAM32Q8TC27 787 aa11.92□□□□□ -0.5
SMG1-209ENST00000563836 TRIM52Q96A61 297 aa11.92□□□□□ -0.5
SMG1-209ENST00000563836 COG6Q9Y2V7 657 aa11.92□□□□□ -0.5
SMG1-209ENST00000563836 ABCC1P33527 1531 aa11.91□□□□□ -0.5
SMG1-209ENST00000563836 DGAT1O75907 488 aa11.91□□□□□ -0.5
SMG1-209ENST00000563836 MAP4K5Q9Y4K4 846 aa11.91□□□□□ -0.5
SMG1-209ENST00000563836 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
SMG1-209ENST00000563836 NEO1Q92859 1461 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms