RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 DDX10Q13206 875 aaKnown RBP23.24■■□□□ 1.31
SPSB3-202ENST00000563668 NSD2O96028 1365 aa23.23■■□□□ 1.31
SPSB3-202ENST00000563668 MORC1Q86VD1 984 aa23.23■■□□□ 1.31
SPSB3-202ENST00000563668 ZCRB1Q8TBF4 217 aaKnown RBP23.22■■□□□ 1.31
SPSB3-202ENST00000563668 SHANK3Q9BYB0 1731 aa23.22■■□□□ 1.31
SPSB3-202ENST00000563668 PROM2Q8N271 834 aa23.21■■□□□ 1.31
SPSB3-202ENST00000563668 EYA1Q99502 592 aa23.21■■□□□ 1.31
SPSB3-202ENST00000563668 RREB1Q92766 1687 aa23.2■■□□□ 1.31
SPSB3-202ENST00000563668 PLSCR1O15162 318 aa23.2■■□□□ 1.3
SPSB3-202ENST00000563668 EIF4A2Q14240 407 aaKnown RBP23.2■■□□□ 1.3
SPSB3-202ENST00000563668 PARD3Q8TEW0 1356 aa23.2■■□□□ 1.3
SPSB3-202ENST00000563668 R3HDM1Q15032 1099 aaKnown RBP23.19■■□□□ 1.3
SPSB3-202ENST00000563668 RAPGEF4Q8WZA2 1011 aa23.19■■□□□ 1.3
SPSB3-202ENST00000563668 NUP188Q5SRE5 1749 aa23.18■■□□□ 1.3
SPSB3-202ENST00000563668 CC2D1BQ5T0F9 858 aaKnown RBP23.18■■□□□ 1.3
SPSB3-202ENST00000563668 NCAPD2Q15021 1401 aa23.17■■□□□ 1.3
SPSB3-202ENST00000563668 NHSQ6T4R5 1651 aa23.17■■□□□ 1.3
SPSB3-202ENST00000563668 TATP17735 454 aaPredicted RBP23.17■■□□□ 1.3
SPSB3-202ENST00000563668 CNGB1Q14028 1251 aaPredicted RBP23.17■■□□□ 1.3
SPSB3-202ENST00000563668 KAT6BQ8WYB5 2073 aa23.14■■□□□ 1.29
SPSB3-202ENST00000563668 CYP27B1O15528 508 aa23.13■■□□□ 1.29
SPSB3-202ENST00000563668 PRIM1P49642 420 aaKnown RBP23.13■■□□□ 1.29
SPSB3-202ENST00000563668 YTHDC1Q96MU7 727 aaKnown RBP23.13■■□□□ 1.29
SPSB3-202ENST00000563668 BTAF1O14981 1849 aa23.12■■□□□ 1.29
SPSB3-202ENST00000563668 TXNRD1Q16881 649 aa23.12■■□□□ 1.29
SPSB3-202ENST00000563668 RGPD3A6NKT7 1758 aaPredicted RBP23.12■■□□□ 1.29
SPSB3-202ENST00000563668 RGPD4Q7Z3J3 1758 aa23.12■■□□□ 1.29
SPSB3-202ENST00000563668 ANO8Q9HCE9 1232 aaPredicted RBP23.11■■□□□ 1.29
SPSB3-202ENST00000563668 SYTL4Q96C24 671 aaPredicted RBP23.1■■□□□ 1.29
SPSB3-202ENST00000563668 DOT1LQ8TEK3 1739 aa23.09■■□□□ 1.29
SPSB3-202ENST00000563668 MTHFSP49914 203 aa23.09■■□□□ 1.29
SPSB3-202ENST00000563668 IGSF1Q8N6C5 1336 aa23.09■■□□□ 1.29
SPSB3-202ENST00000563668 PKD1L3Q7Z443 1732 aa23.07■■□□□ 1.28
SPSB3-202ENST00000563668 PCDH11XQ9BZA7 1347 aa23.07■■□□□ 1.28
SPSB3-202ENST00000563668 PCDH11YQ9BZA8 1340 aa23.07■■□□□ 1.28
SPSB3-202ENST00000563668 NBPF14Q5TI25 921 aa23.07■■□□□ 1.28
SPSB3-202ENST00000563668 AEBP1Q8IUX7 1158 aa23.07■■□□□ 1.28
SPSB3-202ENST00000563668 IL13P35225 146 aa23.06■■□□□ 1.28
SPSB3-202ENST00000563668 NPC1L1Q9UHC9 1359 aa23.06■■□□□ 1.28
SPSB3-202ENST00000563668 LRRC4BQ9NT99 713 aa23.05■■□□□ 1.28
SPSB3-202ENST00000563668 KCNQ4P56696 695 aa23.04■■□□□ 1.28
SPSB3-202ENST00000563668 PDGFDQ9GZP0 370 aaPredicted RBP23.04■■□□□ 1.28
SPSB3-202ENST00000563668 SPG7Q9UQ90 795 aa23.03■■□□□ 1.28
SPSB3-202ENST00000563668 TOGARAM1Q9Y4F4 1720 aa23.02■■□□□ 1.28
SPSB3-202ENST00000563668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.02■■□□□ 1.28
SPSB3-202ENST00000563668 NKX1-1Q15270 411 aaPredicted RBP23.01■■□□□ 1.27
SPSB3-202ENST00000563668 SULT6B1Q6IMI4 303 aa23.01■■□□□ 1.27
SPSB3-202ENST00000563668 ANP32CO43423 234 aa23■■□□□ 1.27
SPSB3-202ENST00000563668 PHKG2P15735 406 aa23■■□□□ 1.27
SPSB3-202ENST00000563668 CCER2I3L3R5 266 aa22.99■■□□□ 1.27
SPSB3-202ENST00000563668 MPRIPQ6WCQ1 1025 aa22.99■■□□□ 1.27
SPSB3-202ENST00000563668 SLC15A2Q16348 729 aa22.98■■□□□ 1.27
SPSB3-202ENST00000563668 ZNF827Q17R98 1081 aa22.97■■□□□ 1.27
SPSB3-202ENST00000563668 IFNL2Q8IZJ0 200 aa22.97■■□□□ 1.27
SPSB3-202ENST00000563668 PAPPAQ13219 1627 aa22.97■■□□□ 1.27
SPSB3-202ENST00000563668 KDRP35968 1356 aa22.96■■□□□ 1.27
SPSB3-202ENST00000563668 ITGB4P16144 1822 aa22.96■■□□□ 1.27
SPSB3-202ENST00000563668 LRP5O75197 1615 aa22.95■■□□□ 1.26
SPSB3-202ENST00000563668 HMOX1P09601 288 aa22.95■■□□□ 1.26
SPSB3-202ENST00000563668 PIGBQ92521 554 aa22.95■■□□□ 1.26
SPSB3-202ENST00000563668 STK32BQ9NY57 414 aa22.95■■□□□ 1.26
SPSB3-202ENST00000563668 COL3A1P02461 1466 aaPredicted RBP22.95■■□□□ 1.26
SPSB3-202ENST00000563668 DIAPH1O60610 1272 aaKnown RBP22.94■■□□□ 1.26
SPSB3-202ENST00000563668 LY75O60449 1722 aa22.94■■□□□ 1.26
SPSB3-202ENST00000563668 PLEKHO1Q53GL0 409 aaPredicted RBP22.93■■□□□ 1.26
SPSB3-202ENST00000563668 SLC27A3Q5K4L6 730 aa22.92■■□□□ 1.26
SPSB3-202ENST00000563668 CASZ1Q86V15 1759 aa22.92■■□□□ 1.26
SPSB3-202ENST00000563668 ZNF530Q6P9A1 599 aaPredicted RBP22.92■■□□□ 1.26
SPSB3-202ENST00000563668 AKT1S1Q96B36 256 aa22.92■■□□□ 1.26
SPSB3-202ENST00000563668 PPP2R1AP30153 589 aa22.91■■□□□ 1.26
SPSB3-202ENST00000563668 CCNL1Q9UK58 526 aaPredicted RBP22.91■■□□□ 1.26
SPSB3-202ENST00000563668 PLEKHG2Q9H7P9 1386 aa22.9■■□□□ 1.26
SPSB3-202ENST00000563668 AMOTQ4VCS5 1084 aa22.9■■□□□ 1.26
SPSB3-202ENST00000563668 PALLDQ8WX93 1383 aa22.89■■□□□ 1.26
SPSB3-202ENST00000563668 ZBTB7AO95365 584 aa22.89■■□□□ 1.26
SPSB3-202ENST00000563668 KDM6AO15550 1401 aaPredicted RBP22.88■■□□□ 1.25
SPSB3-202ENST00000563668 ASAP1Q9ULH1 1129 aa22.88■■□□□ 1.25
SPSB3-202ENST00000563668 TMOD3Q9NYL9 352 aa22.87■■□□□ 1.25
SPSB3-202ENST00000563668 U2SURPO15042 1029 aaKnown RBP22.87■■□□□ 1.25
SPSB3-202ENST00000563668 DCAF5Q96JK2 942 aa22.86■■□□□ 1.25
SPSB3-202ENST00000563668 ATF5Q9Y2D1 282 aaPredicted RBP22.86■■□□□ 1.25
SPSB3-202ENST00000563668 SPON1Q9HCB6 807 aa22.85■■□□□ 1.25
SPSB3-202ENST00000563668 ATG3Q9NT62 314 aa22.85■■□□□ 1.25
SPSB3-202ENST00000563668 MTHFSDQ2M296 383 aaKnown RBP22.83■■□□□ 1.25
SPSB3-202ENST00000563668 C1orf141Q5JVX7 400 aa22.83■■□□□ 1.25
SPSB3-202ENST00000563668 PNPLA7Q6ZV29 1317 aa22.83■■□□□ 1.25
SPSB3-202ENST00000563668 ERVV-2B6SEH9 535 aa22.82■■□□□ 1.24
SPSB3-202ENST00000563668 HSP90AB1P08238 724 aaKnown RBP22.82■■□□□ 1.24
SPSB3-202ENST00000563668 SMARCC1Q92922 1105 aaPredicted RBP22.82■■□□□ 1.24
SPSB3-202ENST00000563668 TUBGCP6Q96RT7 1819 aa22.82■■□□□ 1.24
SPSB3-202ENST00000563668 PTGER2P43116 358 aa22.82■■□□□ 1.24
SPSB3-202ENST00000563668 LGR6Q9HBX8 967 aa22.82■■□□□ 1.24
SPSB3-202ENST00000563668 TFCP2L1Q9NZI6 479 aa22.82■■□□□ 1.24
SPSB3-202ENST00000563668 LOC102724428A0A0B4J2F2 783 aa22.8■■□□□ 1.24
SPSB3-202ENST00000563668 SIK1P57059 783 aa22.8■■□□□ 1.24
SPSB3-202ENST00000563668 CABP4P57796 275 aa22.8■■□□□ 1.24
SPSB3-202ENST00000563668 AMIGO3Q86WK7 504 aa22.8■■□□□ 1.24
SPSB3-202ENST00000563668 NFATC2IPQ8NCF5 419 aa22.8■■□□□ 1.24
SPSB3-202ENST00000563668 GTF3C3Q9Y5Q9 886 aa22.8■■□□□ 1.24
SPSB3-202ENST00000563668 C5P01031 1676 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms