RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 GSK3AP49840 483 aa6.45□□□□□ -1.38
LINC01416-201ENST00000563553 CCDC85AQ96PX6 553 aaPredicted RBP6.45□□□□□ -1.38
LINC01416-201ENST00000563553 A0A1W2PRU2 124 aa6.45□□□□□ -1.38
LINC01416-201ENST00000563553 CC2D2BQ6DHV5 1058 aa6.45□□□□□ -1.38
LINC01416-201ENST00000563553 CNTNAP3BQ96NU0 1288 aa6.45□□□□□ -1.38
LINC01416-201ENST00000563553 CDCA7Q9BWT1 371 aaPredicted RBP6.45□□□□□ -1.38
LINC01416-201ENST00000563553 CNTNAP3Q9BZ76 1288 aa6.45□□□□□ -1.38
LINC01416-201ENST00000563553 VWA5B2Q8N398 1253 aa6.44□□□□□ -1.38
LINC01416-201ENST00000563553 GAS6Q14393 721 aa6.44□□□□□ -1.38
LINC01416-201ENST00000563553 TSGA10IPQ3SY00 556 aa6.44□□□□□ -1.38
LINC01416-201ENST00000563553 LYSMD3Q7Z3D4 306 aa6.44□□□□□ -1.38
LINC01416-201ENST00000563553 PRICKLE2Q7Z3G6 844 aa6.44□□□□□ -1.38
LINC01416-201ENST00000563553 RHOQP17081 205 aa6.43□□□□□ -1.38
LINC01416-201ENST00000563553 PHTF2Q8N3S3 785 aa6.43□□□□□ -1.38
LINC01416-201ENST00000563553 CEP126Q9P2H0 1117 aa6.43□□□□□ -1.38
LINC01416-201ENST00000563553 PCDHB11Q9Y5F2 797 aa6.43□□□□□ -1.38
LINC01416-201ENST00000563553 WHAMMQ8TF30 809 aa6.43□□□□□ -1.38
LINC01416-201ENST00000563553 HRH3Q9Y5N1 445 aa6.43□□□□□ -1.38
LINC01416-201ENST00000563553 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
LINC01416-201ENST00000563553 SLURP2P0DP57 97 aa6.42□□□□□ -1.38
LINC01416-201ENST00000563553 CLN3Q13286 438 aa6.42□□□□□ -1.38
LINC01416-201ENST00000563553 KRTAP4-6Q9BYQ5 205 aa6.42□□□□□ -1.38
LINC01416-201ENST00000563553 GRIP2Q9C0E4 1043 aa6.42□□□□□ -1.38
LINC01416-201ENST00000563553 CDC14CA4D256 554 aa6.42□□□□□ -1.38
LINC01416-201ENST00000563553 GPC1P35052 558 aa6.42□□□□□ -1.38
LINC01416-201ENST00000563553 MCCD1P59942 119 aaPredicted RBP6.42□□□□□ -1.38
LINC01416-201ENST00000563553 RNF20Q5VTR2 975 aa6.42□□□□□ -1.38
LINC01416-201ENST00000563553 ARHGEF10LQ9HCE6 1279 aa6.42□□□□□ -1.38
LINC01416-201ENST00000563553 MEN1O00255 615 aa6.41□□□□□ -1.38
LINC01416-201ENST00000563553 THBS1P07996 1170 aa6.41□□□□□ -1.38
LINC01416-201ENST00000563553 ZNF385CQ66K41 422 aaPredicted RBP6.41□□□□□ -1.38
LINC01416-201ENST00000563553 CCDC125Q86Z20 511 aa6.41□□□□□ -1.38
LINC01416-201ENST00000563553 CHIC2Q9UKJ5 165 aa6.41□□□□□ -1.38
LINC01416-201ENST00000563553 FAM181BA6NEQ2 426 aa6.41□□□□□ -1.38
LINC01416-201ENST00000563553 STAU1O95793 577 aaKnown RBP6.41□□□□□ -1.38
LINC01416-201ENST00000563553 IL2RAP01589 272 aa6.41□□□□□ -1.38
LINC01416-201ENST00000563553 ZNF837Q96EG3 531 aaPredicted RBP6.41□□□□□ -1.38
LINC01416-201ENST00000563553 RAB6BQ9NRW1 208 aa6.41□□□□□ -1.38
LINC01416-201ENST00000563553 MCM6Q14566 821 aa6.39□□□□□ -1.39
LINC01416-201ENST00000563553 SV2AQ7L0J3 742 aa6.39□□□□□ -1.39
LINC01416-201ENST00000563553 CYP2U1Q7Z449 544 aa6.39□□□□□ -1.39
LINC01416-201ENST00000563553 POU4F2Q12837 409 aa6.39□□□□□ -1.39
LINC01416-201ENST00000563553 DBN1Q16643 649 aa6.39□□□□□ -1.39
LINC01416-201ENST00000563553 GDPD2Q9HCC8 539 aa6.39□□□□□ -1.39
LINC01416-201ENST00000563553 SPATA31C2B4DYI2 1134 aa6.38□□□□□ -1.39
LINC01416-201ENST00000563553 ARHGEF15O94989 841 aa6.38□□□□□ -1.39
LINC01416-201ENST00000563553 NBPF10Q6P3W6 841 aaKnown RBP6.38□□□□□ -1.39
LINC01416-201ENST00000563553 NBPF15Q8N660 670 aa6.38□□□□□ -1.39
LINC01416-201ENST00000563553 APBB1O00213 710 aa6.38□□□□□ -1.39
LINC01416-201ENST00000563553 VAC14Q08AM6 782 aa6.38□□□□□ -1.39
LINC01416-201ENST00000563553 FHDC1Q9C0D6 1143 aaPredicted RBP6.38□□□□□ -1.39
LINC01416-201ENST00000563553 IGSF5Q9NSI5 407 aa6.38□□□□□ -1.39
LINC01416-201ENST00000563553 ZNF330Q9Y3S2 320 aaPredicted RBP6.38□□□□□ -1.39
LINC01416-201ENST00000563553 TRIM22Q8IYM9 498 aa6.37□□□□□ -1.39
LINC01416-201ENST00000563553 DYRK1BQ9Y463 629 aa6.37□□□□□ -1.39
LINC01416-201ENST00000563553 GPR25O00155 361 aa6.37□□□□□ -1.39
LINC01416-201ENST00000563553 CNKSR1Q969H4 720 aa6.37□□□□□ -1.39
LINC01416-201ENST00000563553 GNRH1P01148 92 aa6.36□□□□□ -1.39
LINC01416-201ENST00000563553 ZNF592Q92610 1267 aa6.36□□□□□ -1.39
LINC01416-201ENST00000563553 ESYT1Q9BSJ8 1104 aa6.36□□□□□ -1.39
LINC01416-201ENST00000563553 ADAMTS8Q9UP79 889 aa6.36□□□□□ -1.39
LINC01416-201ENST00000563553 ADAMTS2O95450 1211 aa6.36□□□□□ -1.39
LINC01416-201ENST00000563553 CENPCQ03188 943 aa6.35□□□□□ -1.39
LINC01416-201ENST00000563553 KCNMA1Q12791 1236 aa6.35□□□□□ -1.39
LINC01416-201ENST00000563553 ETNK1Q9HBU6 452 aa6.35□□□□□ -1.39
LINC01416-201ENST00000563553 UBAP2LQ14157 1087 aaKnown RBP6.34□□□□□ -1.39
LINC01416-201ENST00000563553 SLC27A3Q5K4L6 730 aa6.34□□□□□ -1.39
LINC01416-201ENST00000563553 LYPD4Q6UWN0 246 aa6.34□□□□□ -1.39
LINC01416-201ENST00000563553 XAGE2Q96GT9 111 aa6.34□□□□□ -1.39
LINC01416-201ENST00000563553 NLRP3Q96P20 1036 aa6.34□□□□□ -1.39
LINC01416-201ENST00000563553 WASLO00401 505 aaPredicted RBP6.34□□□□□ -1.39
LINC01416-201ENST00000563553 ABL2P42684 1182 aa6.34□□□□□ -1.39
LINC01416-201ENST00000563553 SCNN1DP51172 638 aa6.34□□□□□ -1.39
LINC01416-201ENST00000563553 SRSF11Q05519 484 aaKnown RBP6.34□□□□□ -1.39
LINC01416-201ENST00000563553 WDR44Q5JSH3 913 aa6.34□□□□□ -1.39
LINC01416-201ENST00000563553 EIF4G2P78344 907 aaKnown RBP eCLIP6.33□□□□□ -1.4
LINC01416-201ENST00000563553 SVOPQ8N4V2 548 aa6.33□□□□□ -1.4
LINC01416-201ENST00000563553 DOLKQ9UPQ8 538 aa6.33□□□□□ -1.4
LINC01416-201ENST00000563553 COG6Q9Y2V7 657 aa6.33□□□□□ -1.4
LINC01416-201ENST00000563553 TAS1R3Q7RTX0 852 aa6.33□□□□□ -1.4
LINC01416-201ENST00000563553 TRIM52Q96A61 297 aa6.33□□□□□ -1.4
LINC01416-201ENST00000563553 LMTK3Q96Q04 1460 aa6.32□□□□□ -1.4
LINC01416-201ENST00000563553 PIK3CDO00329 1044 aa6.32□□□□□ -1.4
LINC01416-201ENST00000563553 RIPOR1Q6ZS17 1223 aa6.32□□□□□ -1.4
LINC01416-201ENST00000563553 ZNF295-AS1Q8N0V1 137 aa6.32□□□□□ -1.4
LINC01416-201ENST00000563553 GTPBP3Q969Y2 492 aaKnown RBP6.32□□□□□ -1.4
LINC01416-201ENST00000563553 POM121Q96HA1 1249 aa6.32□□□□□ -1.4
LINC01416-201ENST00000563553 GAS2L1Q99501 681 aaPredicted RBP6.32□□□□□ -1.4
LINC01416-201ENST00000563553 RNF135Q8IUD6 432 aa6.32□□□□□ -1.4
LINC01416-201ENST00000563553 GMCL1Q96IK5 515 aa6.32□□□□□ -1.4
LINC01416-201ENST00000563553 CELA2BP08218 269 aaPredicted RBP6.31□□□□□ -1.4
LINC01416-201ENST00000563553 C4orf17Q53FE4 359 aa6.31□□□□□ -1.4
LINC01416-201ENST00000563553 TIMMDC1Q9NPL8 285 aa6.31□□□□□ -1.4
LINC01416-201ENST00000563553 MYCP01106 439 aaPredicted RBP6.31□□□□□ -1.4
LINC01416-201ENST00000563553 OXLD1Q5BKU9 147 aa6.31□□□□□ -1.4
LINC01416-201ENST00000563553 MBIPQ9NS73 344 aa6.31□□□□□ -1.4
LINC01416-201ENST00000563553 IGF1RP08069 1367 aa6.31□□□□□ -1.4
LINC01416-201ENST00000563553 F11P03951 625 aa6.3□□□□□ -1.4
LINC01416-201ENST00000563553 PHKA2P46019 1235 aa6.3□□□□□ -1.4
LINC01416-201ENST00000563553 SLFNL1Q499Z3 407 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms