RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 BTAF1O14981 1849 aa14.47□□□□□ -0.09
SNX29-202ENST00000563308 ROCK2O75116 1388 aaKnown RBP14.47□□□□□ -0.09
SNX29-202ENST00000563308 FOXN1O15353 648 aa14.46□□□□□ -0.09
SNX29-202ENST00000563308 CFAP44Q96MT7 982 aa14.46□□□□□ -0.09
SNX29-202ENST00000563308 RRAGCQ9HB90 399 aa14.46□□□□□ -0.09
SNX29-202ENST00000563308 HMGB2P26583 209 aaKnown RBP14.45□□□□□ -0.1
SNX29-202ENST00000563308 RGS19P49795 217 aa14.45□□□□□ -0.1
SNX29-202ENST00000563308 COL23A1Q86Y22 540 aaPredicted RBP14.45□□□□□ -0.1
SNX29-202ENST00000563308 CARD10Q9BWT7 1032 aa14.45□□□□□ -0.1
SNX29-202ENST00000563308 EVC2Q86UK5 1308 aa14.44□□□□□ -0.1
SNX29-202ENST00000563308 FLAD1Q8NFF5 587 aa14.44□□□□□ -0.1
SNX29-202ENST00000563308 TUBGCP6Q96RT7 1819 aa14.43□□□□□ -0.1
SNX29-202ENST00000563308 BCS1LQ9Y276 419 aa14.43□□□□□ -0.1
SNX29-202ENST00000563308 PIK3C2AO00443 1686 aa14.42□□□□□ -0.1
SNX29-202ENST00000563308 KCNQ4P56696 695 aa14.41□□□□□ -0.1
SNX29-202ENST00000563308 CCDC7Q96M83 1385 aa14.41□□□□□ -0.1
SNX29-202ENST00000563308 CICQ96RK0 1608 aaPredicted RBP14.41□□□□□ -0.1
SNX29-202ENST00000563308 C10orf71Q711Q0 1435 aa14.41□□□□□ -0.1
SNX29-202ENST00000563308 C9orf131Q5VYM1 1079 aa14.4□□□□□ -0.1
SNX29-202ENST00000563308 SYTL4Q96C24 671 aaPredicted RBP14.4□□□□□ -0.1
SNX29-202ENST00000563308 MKRN1Q9UHC7 482 aaKnown RBP14.4□□□□□ -0.1
SNX29-202ENST00000563308 CCNL1Q9UK58 526 aaPredicted RBP14.4□□□□□ -0.1
SNX29-202ENST00000563308 SBNO2Q9Y2G9 1366 aa14.39□□□□□ -0.11
SNX29-202ENST00000563308 LBX1P52954 281 aa14.39□□□□□ -0.11
SNX29-202ENST00000563308 SLIT3O75094 1523 aa14.39□□□□□ -0.11
SNX29-202ENST00000563308 KCPQ6ZWJ8 1503 aa14.39□□□□□ -0.11
SNX29-202ENST00000563308 NLRP6P59044 892 aa14.38□□□□□ -0.11
SNX29-202ENST00000563308 CPSF1Q10570 1443 aaKnown RBP14.38□□□□□ -0.11
SNX29-202ENST00000563308 TTC21BQ7Z4L5 1316 aa14.38□□□□□ -0.11
SNX29-202ENST00000563308 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
SNX29-202ENST00000563308 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
SNX29-202ENST00000563308 CARD11Q9BXL7 1154 aa14.37□□□□□ -0.11
SNX29-202ENST00000563308 TNRC6CQ9HCJ0 1690 aaKnown RBP14.36□□□□□ -0.11
SNX29-202ENST00000563308 ABCC6O95255 1503 aa14.36□□□□□ -0.11
SNX29-202ENST00000563308 TONSLQ96HA7 1378 aa14.35□□□□□ -0.11
SNX29-202ENST00000563308 PXDNLA1KZ92 1463 aa14.35□□□□□ -0.11
SNX29-202ENST00000563308 CD163L1Q9NR16 1453 aa14.34□□□□□ -0.11
SNX29-202ENST00000563308 FCHSD2O94868 740 aa14.34□□□□□ -0.11
SNX29-202ENST00000563308 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
SNX29-202ENST00000563308 RNF181Q9P0P0 153 aa14.34□□□□□ -0.11
SNX29-202ENST00000563308 AXIN2Q9Y2T1 843 aa14.34□□□□□ -0.11
SNX29-202ENST00000563308 COL18A1P39060 1754 aa14.33□□□□□ -0.12
SNX29-202ENST00000563308 IL2RBP14784 551 aa14.33□□□□□ -0.12
SNX29-202ENST00000563308 VEGFAP15692 232 aaPredicted RBP14.33□□□□□ -0.12
SNX29-202ENST00000563308 ARHGEF25Q86VW2 580 aa14.33□□□□□ -0.12
SNX29-202ENST00000563308 TTC21AQ8NDW8 1320 aa14.33□□□□□ -0.12
SNX29-202ENST00000563308 KTN1Q86UP2 1357 aaKnown RBP14.33□□□□□ -0.12
SNX29-202ENST00000563308 TGFB2P61812 414 aa14.31□□□□□ -0.12
SNX29-202ENST00000563308 TESK2Q96S53 571 aa14.31□□□□□ -0.12
SNX29-202ENST00000563308 SLC12A5Q9H2X9 1139 aa14.31□□□□□ -0.12
SNX29-202ENST00000563308 NFAT5O94916 1531 aa14.31□□□□□ -0.12
SNX29-202ENST00000563308 DDX54Q8TDD1 881 aaKnown RBP14.3□□□□□ -0.12
SNX29-202ENST00000563308 NLRP2Q9NX02 1062 aa14.3□□□□□ -0.12
SNX29-202ENST00000563308 USP31Q70CQ4 1352 aa14.3□□□□□ -0.12
SNX29-202ENST00000563308 KCNH5Q8NCM2 988 aa14.29□□□□□ -0.12
SNX29-202ENST00000563308 PUS7Q96PZ0 661 aaKnown RBP14.29□□□□□ -0.12
SNX29-202ENST00000563308 USP47Q96K76 1375 aa14.29□□□□□ -0.12
SNX29-202ENST00000563308 MON2Q7Z3U7 1717 aa14.29□□□□□ -0.12
SNX29-202ENST00000563308 PKD1L3Q7Z443 1732 aa14.29□□□□□ -0.12
SNX29-202ENST00000563308 PDE4DIPQ5VU43 2346 aa14.29□□□□□ -0.12
SNX29-202ENST00000563308 ST20-MTHFSA0A0A6YYL1 179 aa14.28□□□□□ -0.12
SNX29-202ENST00000563308 PRIM1P49642 420 aaKnown RBP14.28□□□□□ -0.12
SNX29-202ENST00000563308 NME9Q86XW9 330 aa14.28□□□□□ -0.12
SNX29-202ENST00000563308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNX29-202ENST00000563308 AK7Q96M32 723 aa14.28□□□□□ -0.12
SNX29-202ENST00000563308 A0A0G2JLW4 131 aa14.27□□□□□ -0.13
SNX29-202ENST00000563308 SOX12O15370 315 aa14.27□□□□□ -0.13
SNX29-202ENST00000563308 TMC1Q8TDI8 760 aa14.27□□□□□ -0.13
SNX29-202ENST00000563308 WBP1LQ9NX94 342 aa14.27□□□□□ -0.13
SNX29-202ENST00000563308 CNTNAP1P78357 1384 aa14.26□□□□□ -0.13
SNX29-202ENST00000563308 HSPA8P11142 646 aaKnown RBP14.26□□□□□ -0.13
SNX29-202ENST00000563308 PRPF38BQ5VTL8 546 aaKnown RBP14.26□□□□□ -0.13
SNX29-202ENST00000563308 BEGAINQ9BUH8 593 aa14.26□□□□□ -0.13
SNX29-202ENST00000563308 LY75O60449 1722 aa14.26□□□□□ -0.13
SNX29-202ENST00000563308 USP54Q70EL1 1684 aa14.26□□□□□ -0.13
SNX29-202ENST00000563308 A0A1W2PP64 1363 aa14.25□□□□□ -0.13
SNX29-202ENST00000563308 RGPD5Q99666 1765 aa14.25□□□□□ -0.13
SNX29-202ENST00000563308 PHF14O94880 888 aa14.25□□□□□ -0.13
SNX29-202ENST00000563308 MAP2K1Q02750 393 aaPredicted RBP14.25□□□□□ -0.13
SNX29-202ENST00000563308 EDC4Q6P2E9 1401 aaKnown RBP14.24□□□□□ -0.13
SNX29-202ENST00000563308 NSD3Q9BZ95 1437 aa14.24□□□□□ -0.13
SNX29-202ENST00000563308 ANKRD36BQ8N2N9 1353 aa14.24□□□□□ -0.13
SNX29-202ENST00000563308 HDGFL2Q7Z4V5 671 aaPredicted RBP14.24□□□□□ -0.13
SNX29-202ENST00000563308 ZC3H4Q9UPT8 1303 aaKnown RBP14.23□□□□□ -0.13
SNX29-202ENST00000563308 TERF2IPQ9NYB0 399 aa14.23□□□□□ -0.13
SNX29-202ENST00000563308 VEGFBP49765 207 aa14.22□□□□□ -0.13
SNX29-202ENST00000563308 N4BP2Q86UW6 1770 aaPredicted RBP14.22□□□□□ -0.13
SNX29-202ENST00000563308 GLTPD2A6NH11 291 aa14.21□□□□□ -0.13
SNX29-202ENST00000563308 GCC1Q96CN9 775 aa14.21□□□□□ -0.13
SNX29-202ENST00000563308 C5P01031 1676 aa14.2□□□□□ -0.14
SNX29-202ENST00000563308 DPEP1P16444 411 aa14.2□□□□□ -0.14
SNX29-202ENST00000563308 CCDC87Q9NVE4 849 aa14.2□□□□□ -0.14
SNX29-202ENST00000563308 PIM2Q9P1W9 311 aa14.2□□□□□ -0.14
SNX29-202ENST00000563308 ERBB3P21860 1342 aa14.19□□□□□ -0.14
SNX29-202ENST00000563308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.19□□□□□ -0.14
SNX29-202ENST00000563308 MMP10P09238 476 aa14.19□□□□□ -0.14
SNX29-202ENST00000563308 DALRD3Q5D0E6 543 aaKnown RBP14.19□□□□□ -0.14
SNX29-202ENST00000563308 CHADLQ6NUI6 762 aa14.19□□□□□ -0.14
SNX29-202ENST00000563308 DPY19L2Q6NUT2 758 aa14.19□□□□□ -0.14
SNX29-202ENST00000563308 SLC24A1O60721 1099 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms