RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 BARGINQ6ZT62 677 aa19.6■□□□□ 0.73
CDH11-207ENST00000563255 LTV1Q96GA3 475 aaPredicted RBP19.59■□□□□ 0.73
CDH11-207ENST00000563255 EYA1Q99502 592 aa19.59■□□□□ 0.73
CDH11-207ENST00000563255 NCAPD2Q15021 1401 aa19.59■□□□□ 0.73
CDH11-207ENST00000563255 KDRP35968 1356 aa19.58■□□□□ 0.73
CDH11-207ENST00000563255 TCP11L2Q8N4U5 519 aa19.58■□□□□ 0.72
CDH11-207ENST00000563255 CAMKK2Q96RR4 588 aa19.58■□□□□ 0.72
CDH11-207ENST00000563255 DLG5Q8TDM6 1919 aa19.58■□□□□ 0.72
CDH11-207ENST00000563255 DISP2A7MBM2 1401 aa19.57■□□□□ 0.72
CDH11-207ENST00000563255 RSPH6AQ9H0K4 717 aa19.56■□□□□ 0.72
CDH11-207ENST00000563255 WDR17Q8IZU2 1322 aa19.55■□□□□ 0.72
CDH11-207ENST00000563255 NBPF6Q5VWK0 638 aa19.55■□□□□ 0.72
CDH11-207ENST00000563255 SULT6B1Q6IMI4 303 aa19.55■□□□□ 0.72
CDH11-207ENST00000563255 RUNDC1Q96C34 613 aa19.55■□□□□ 0.72
CDH11-207ENST00000563255 NBPF4Q96M43 638 aa19.55■□□□□ 0.72
CDH11-207ENST00000563255 PLEKHF1Q96S99 279 aa19.55■□□□□ 0.72
CDH11-207ENST00000563255 WNK3Q9BYP7 1800 aa19.54■□□□□ 0.72
CDH11-207ENST00000563255 HMOX1P09601 288 aa19.54■□□□□ 0.72
CDH11-207ENST00000563255 THRAP3Q9Y2W1 955 aaKnown RBP19.53■□□□□ 0.72
CDH11-207ENST00000563255 PARP4Q9UKK3 1724 aaKnown RBP19.53■□□□□ 0.72
CDH11-207ENST00000563255 CSB-PGBD3P0DP91 1061 aa19.52■□□□□ 0.72
CDH11-207ENST00000563255 CCDC146Q8IYE0 955 aa19.52■□□□□ 0.72
CDH11-207ENST00000563255 VIRMAQ69YN4 1812 aaKnown RBP19.51■□□□□ 0.71
CDH11-207ENST00000563255 NEFMP07197 916 aa19.51■□□□□ 0.71
CDH11-207ENST00000563255 PRKAR2BP31323 418 aa19.51■□□□□ 0.71
CDH11-207ENST00000563255 AEBP1Q8IUX7 1158 aa19.51■□□□□ 0.71
CDH11-207ENST00000563255 CRB1P82279 1406 aa19.51■□□□□ 0.71
CDH11-207ENST00000563255 NGEFQ8N5V2 710 aa19.5■□□□□ 0.71
CDH11-207ENST00000563255 NLRP2Q9NX02 1062 aa19.5■□□□□ 0.71
CDH11-207ENST00000563255 MAPK8IP3Q9UPT6 1336 aa19.5■□□□□ 0.71
CDH11-207ENST00000563255 PLEKHG2Q9H7P9 1386 aa19.49■□□□□ 0.71
CDH11-207ENST00000563255 HNRNPUQ00839 825 aaKnown RBP eCLIP19.49■□□□□ 0.71
CDH11-207ENST00000563255 NCBP3Q53F19 620 aaKnown RBP19.49■□□□□ 0.71
CDH11-207ENST00000563255 NBPF14Q5TI25 921 aa19.49■□□□□ 0.71
CDH11-207ENST00000563255 TOM1L2Q6ZVM7 507 aa19.49■□□□□ 0.71
CDH11-207ENST00000563255 CARD10Q9BWT7 1032 aa19.49■□□□□ 0.71
CDH11-207ENST00000563255 NUP188Q5SRE5 1749 aa19.48■□□□□ 0.71
CDH11-207ENST00000563255 PKD1L3Q7Z443 1732 aa19.48■□□□□ 0.71
CDH11-207ENST00000563255 USHBP1Q8N6Y0 703 aa19.48■□□□□ 0.71
CDH11-207ENST00000563255 YTHDC1Q96MU7 727 aaKnown RBP19.48■□□□□ 0.71
CDH11-207ENST00000563255 APAF1O14727 1248 aa19.47■□□□□ 0.71
CDH11-207ENST00000563255 RREB1Q92766 1687 aa19.46■□□□□ 0.71
CDH11-207ENST00000563255 PHACTR3Q96KR7 559 aa19.45■□□□□ 0.7
CDH11-207ENST00000563255 YY1P25490 414 aa19.44■□□□□ 0.7
CDH11-207ENST00000563255 TMPOP42166 694 aaKnown RBP19.44■□□□□ 0.7
CDH11-207ENST00000563255 DDB1Q16531 1140 aa19.44■□□□□ 0.7
CDH11-207ENST00000563255 SHANK3Q9BYB0 1731 aa19.43■□□□□ 0.7
CDH11-207ENST00000563255 ZBED9Q6R2W3 1325 aa19.43■□□□□ 0.7
CDH11-207ENST00000563255 TATP17735 454 aaPredicted RBP19.42■□□□□ 0.7
CDH11-207ENST00000563255 NFE2L2Q16236 605 aa19.42■□□□□ 0.7
CDH11-207ENST00000563255 RAPGEF4Q8WZA2 1011 aa19.42■□□□□ 0.7
CDH11-207ENST00000563255 MEGF6O75095 1541 aa19.41■□□□□ 0.7
CDH11-207ENST00000563255 CCDC27Q2M243 656 aa19.41■□□□□ 0.7
CDH11-207ENST00000563255 AMOTQ4VCS5 1084 aa19.41■□□□□ 0.7
CDH11-207ENST00000563255 PPP1R1BQ9UD71 204 aaPredicted RBP19.41■□□□□ 0.7
CDH11-207ENST00000563255 PLEKHO1Q53GL0 409 aaPredicted RBP19.4■□□□□ 0.7
CDH11-207ENST00000563255 GAS2L2Q8NHY3 880 aa19.4■□□□□ 0.7
CDH11-207ENST00000563255 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.4■□□□□ 0.7
CDH11-207ENST00000563255 OVOS2A0A0G2JMS6 1433 aa19.4■□□□□ 0.7
CDH11-207ENST00000563255 IL2RBP14784 551 aa19.39■□□□□ 0.69
CDH11-207ENST00000563255 RIPK4P57078 832 aa19.39■□□□□ 0.69
CDH11-207ENST00000563255 MTHFSDQ2M296 383 aaKnown RBP19.39■□□□□ 0.69
CDH11-207ENST00000563255 SCN11AQ9UI33 1791 aa19.39■□□□□ 0.69
CDH11-207ENST00000563255 RRP7AQ9Y3A4 280 aaKnown RBP19.38■□□□□ 0.69
CDH11-207ENST00000563255 ZNF521Q96K83 1311 aa19.37■□□□□ 0.69
CDH11-207ENST00000563255 NEUROD2Q15784 382 aa19.37■□□□□ 0.69
CDH11-207ENST00000563255 PTF1AQ7RTS3 328 aa19.37■□□□□ 0.69
CDH11-207ENST00000563255 MARCH10Q8NA82 808 aaPredicted RBP19.37■□□□□ 0.69
CDH11-207ENST00000563255 CDCA7Q9BWT1 371 aaPredicted RBP19.37■□□□□ 0.69
CDH11-207ENST00000563255 BCL11BQ9C0K0 894 aaPredicted RBP19.37■□□□□ 0.69
CDH11-207ENST00000563255 ADAMTS7Q9UKP4 1686 aa19.36■□□□□ 0.69
CDH11-207ENST00000563255 SENP3-EIF4A1A0A087X0R7 540 aa19.36■□□□□ 0.69
CDH11-207ENST00000563255 PLSCR1O15162 318 aa19.36■□□□□ 0.69
CDH11-207ENST00000563255 LMOD3Q0VAK6 560 aa19.36■□□□□ 0.69
CDH11-207ENST00000563255 SPON1Q9HCB6 807 aa19.36■□□□□ 0.69
CDH11-207ENST00000563255 TRIM35Q9UPQ4 493 aa19.36■□□□□ 0.69
CDH11-207ENST00000563255 SPG7Q9UQ90 795 aa19.36■□□□□ 0.69
CDH11-207ENST00000563255 SALL2Q9Y467 1007 aaPredicted RBP19.36■□□□□ 0.69
CDH11-207ENST00000563255 KCNQ2O43526 872 aa19.35■□□□□ 0.69
CDH11-207ENST00000563255 HTATSF1O43719 755 aaKnown RBP19.35■□□□□ 0.69
CDH11-207ENST00000563255 WWC1Q8IX03 1113 aa19.35■□□□□ 0.69
CDH11-207ENST00000563255 LRRC37A3O60309 1634 aa19.34■□□□□ 0.69
CDH11-207ENST00000563255 EXOC5O00471 708 aa19.34■□□□□ 0.69
CDH11-207ENST00000563255 AKAP4Q5JQC9 854 aa19.33■□□□□ 0.68
CDH11-207ENST00000563255 WDR63Q8IWG1 891 aa19.33■□□□□ 0.68
CDH11-207ENST00000563255 MAP3K5Q99683 1374 aa19.32■□□□□ 0.68
CDH11-207ENST00000563255 SIPA1L3O60292 1781 aaPredicted RBP19.32■□□□□ 0.68
CDH11-207ENST00000563255 GNAT3A8MTJ3 354 aa19.32■□□□□ 0.68
CDH11-207ENST00000563255 ZNF530Q6P9A1 599 aaPredicted RBP19.32■□□□□ 0.68
CDH11-207ENST00000563255 ZCRB1Q8TBF4 217 aaKnown RBP19.32■□□□□ 0.68
CDH11-207ENST00000563255 C1orf141Q5JVX7 400 aa19.31■□□□□ 0.68
CDH11-207ENST00000563255 IFNL2Q8IZJ0 200 aa19.3■□□□□ 0.68
CDH11-207ENST00000563255 PROM2Q8N271 834 aa19.3■□□□□ 0.68
CDH11-207ENST00000563255 RTF1Q92541 710 aaKnown RBP19.3■□□□□ 0.68
CDH11-207ENST00000563255 PCDH11XQ9BZA7 1347 aa19.29■□□□□ 0.68
CDH11-207ENST00000563255 PCDH11YQ9BZA8 1340 aa19.29■□□□□ 0.68
CDH11-207ENST00000563255 CALD1Q05682 793 aaKnown RBP19.29■□□□□ 0.68
CDH11-207ENST00000563255 GOLGA2Q08379 1002 aa19.29■□□□□ 0.68
CDH11-207ENST00000563255 PDGFDQ9GZP0 370 aaPredicted RBP19.29■□□□□ 0.68
CDH11-207ENST00000563255 ANO8Q9HCE9 1232 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms