RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 PRIM1P49642 420 aaKnown RBP21■□□□□ 0.95
LPCAT4-204ENST00000563240 PDGFDQ9GZP0 370 aaPredicted RBP21■□□□□ 0.95
LPCAT4-204ENST00000563240 STK32BQ9NY57 414 aa21■□□□□ 0.95
LPCAT4-204ENST00000563240 KIF24Q5T7B8 1368 aa20.98■□□□□ 0.95
LPCAT4-204ENST00000563240 POLKQ9UBT6 870 aa20.98■□□□□ 0.95
LPCAT4-204ENST00000563240 NHSQ6T4R5 1651 aa20.98■□□□□ 0.95
LPCAT4-204ENST00000563240 KAT6BQ8WYB5 2073 aa20.98■□□□□ 0.95
LPCAT4-204ENST00000563240 SPON1Q9HCB6 807 aa20.97■□□□□ 0.95
LPCAT4-204ENST00000563240 RGPD3A6NKT7 1758 aaPredicted RBP20.96■□□□□ 0.95
LPCAT4-204ENST00000563240 RGPD4Q7Z3J3 1758 aa20.96■□□□□ 0.95
LPCAT4-204ENST00000563240 SLC15A2Q16348 729 aa20.96■□□□□ 0.95
LPCAT4-204ENST00000563240 WASHC2AQ641Q2 1341 aa20.95■□□□□ 0.94
LPCAT4-204ENST00000563240 ZBTB7AO95365 584 aa20.94■□□□□ 0.94
LPCAT4-204ENST00000563240 KCNQ4P56696 695 aa20.94■□□□□ 0.94
LPCAT4-204ENST00000563240 LRRC4BQ9NT99 713 aa20.94■□□□□ 0.94
LPCAT4-204ENST00000563240 PPP1R1BQ9UD71 204 aaPredicted RBP20.94■□□□□ 0.94
LPCAT4-204ENST00000563240 EYA1Q99502 592 aa20.93■□□□□ 0.94
LPCAT4-204ENST00000563240 ATF5Q9Y2D1 282 aaPredicted RBP20.92■□□□□ 0.94
LPCAT4-204ENST00000563240 BTAF1O14981 1849 aa20.92■□□□□ 0.94
LPCAT4-204ENST00000563240 KIF7Q2M1P5 1343 aa20.91■□□□□ 0.94
LPCAT4-204ENST00000563240 MORC1Q86VD1 984 aa20.91■□□□□ 0.94
LPCAT4-204ENST00000563240 KNSTRNQ9Y448 316 aa20.91■□□□□ 0.94
LPCAT4-204ENST00000563240 PCDH11XQ9BZA7 1347 aa20.9■□□□□ 0.94
LPCAT4-204ENST00000563240 PCDH11YQ9BZA8 1340 aa20.9■□□□□ 0.94
LPCAT4-204ENST00000563240 EIF4A2Q14240 407 aaKnown RBP20.9■□□□□ 0.94
LPCAT4-204ENST00000563240 CYP27B1O15528 508 aa20.89■□□□□ 0.93
LPCAT4-204ENST00000563240 ZNF827Q17R98 1081 aa20.89■□□□□ 0.93
LPCAT4-204ENST00000563240 NSD2O96028 1365 aa20.88■□□□□ 0.93
LPCAT4-204ENST00000563240 MAP2P11137 1827 aaKnown RBP20.88■□□□□ 0.93
LPCAT4-204ENST00000563240 SHANK3Q9BYB0 1731 aa20.87■□□□□ 0.93
LPCAT4-204ENST00000563240 SLC27A3Q5K4L6 730 aa20.87■□□□□ 0.93
LPCAT4-204ENST00000563240 MPRIPQ6WCQ1 1025 aa20.87■□□□□ 0.93
LPCAT4-204ENST00000563240 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
LPCAT4-204ENST00000563240 DOT1LQ8TEK3 1739 aa20.86■□□□□ 0.93
LPCAT4-204ENST00000563240 CCNL1Q9UK58 526 aaPredicted RBP20.85■□□□□ 0.93
LPCAT4-204ENST00000563240 CNGB1Q14028 1251 aaPredicted RBP20.83■□□□□ 0.93
LPCAT4-204ENST00000563240 AKT1S1Q96B36 256 aa20.83■□□□□ 0.93
LPCAT4-204ENST00000563240 ANKRD26Q9UPS8 1709 aa20.83■□□□□ 0.92
LPCAT4-204ENST00000563240 CASZ1Q86V15 1759 aa20.82■□□□□ 0.92
LPCAT4-204ENST00000563240 PTGER2P43116 358 aa20.82■□□□□ 0.92
LPCAT4-204ENST00000563240 MTFR1LQ9H019 292 aa20.82■□□□□ 0.92
LPCAT4-204ENST00000563240 TFCP2L1Q9NZI6 479 aa20.82■□□□□ 0.92
LPCAT4-204ENST00000563240 NCAPD2Q15021 1401 aa20.81■□□□□ 0.92
LPCAT4-204ENST00000563240 AMER1Q5JTC6 1135 aaPredicted RBP20.81■□□□□ 0.92
LPCAT4-204ENST00000563240 CC2D1BQ5T0F9 858 aaKnown RBP20.8■□□□□ 0.92
LPCAT4-204ENST00000563240 PAPPAQ13219 1627 aa20.79■□□□□ 0.92
LPCAT4-204ENST00000563240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.79■□□□□ 0.922e-8■■■■■ 37.9
LPCAT4-204ENST00000563240 IGSF1Q8N6C5 1336 aa20.78■□□□□ 0.92
LPCAT4-204ENST00000563240 PHKG2P15735 406 aa20.78■□□□□ 0.92
LPCAT4-204ENST00000563240 NKX1-1Q15270 411 aaPredicted RBP20.78■□□□□ 0.92
LPCAT4-204ENST00000563240 IFNL2Q8IZJ0 200 aa20.78■□□□□ 0.92
LPCAT4-204ENST00000563240 PIGBQ92521 554 aa20.78■□□□□ 0.92
LPCAT4-204ENST00000563240 PNPLA7Q6ZV29 1317 aa20.78■□□□□ 0.92
LPCAT4-204ENST00000563240 PALLDQ8WX93 1383 aa20.77■□□□□ 0.92
LPCAT4-204ENST00000563240 MSH5O43196 834 aa20.77■□□□□ 0.92
LPCAT4-204ENST00000563240 AEBP1Q8IUX7 1158 aa20.77■□□□□ 0.92
LPCAT4-204ENST00000563240 PER1O15534 1290 aaPredicted RBP20.76■□□□□ 0.91
LPCAT4-204ENST00000563240 MTHFSP49914 203 aa20.75■□□□□ 0.91
LPCAT4-204ENST00000563240 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
LPCAT4-204ENST00000563240 PKD1L3Q7Z443 1732 aa20.75■□□□□ 0.91
LPCAT4-204ENST00000563240 PLEKHO1Q53GL0 409 aaPredicted RBP20.74■□□□□ 0.91
LPCAT4-204ENST00000563240 SULT6B1Q6IMI4 303 aa20.74■□□□□ 0.91
LPCAT4-204ENST00000563240 SMARCC1Q92922 1105 aaPredicted RBP20.74■□□□□ 0.91
LPCAT4-204ENST00000563240 SGIP1Q9BQI5 828 aa20.74■□□□□ 0.91
LPCAT4-204ENST00000563240 FHDC1Q9C0D6 1143 aaPredicted RBP20.74■□□□□ 0.91
LPCAT4-204ENST00000563240 IL13P35225 146 aa20.73■□□□□ 0.91
LPCAT4-204ENST00000563240 ARXQ96QS3 562 aa20.73■□□□□ 0.91
LPCAT4-204ENST00000563240 LY75O60449 1722 aa20.73■□□□□ 0.91
LPCAT4-204ENST00000563240 DCAF8L1A6NGE4 600 aa20.72■□□□□ 0.91
LPCAT4-204ENST00000563240 ZNF530Q6P9A1 599 aaPredicted RBP20.72■□□□□ 0.91
LPCAT4-204ENST00000563240 COL23A1Q86Y22 540 aaPredicted RBP20.72■□□□□ 0.91
LPCAT4-204ENST00000563240 KLHL34Q8N239 644 aa20.72■□□□□ 0.91
LPCAT4-204ENST00000563240 ASAP1Q9ULH1 1129 aa20.72■□□□□ 0.91
LPCAT4-204ENST00000563240 TOGARAM1Q9Y4F4 1720 aa20.71■□□□□ 0.91
LPCAT4-204ENST00000563240 SLC16A10Q8TF71 515 aa20.71■□□□□ 0.91
LPCAT4-204ENST00000563240 SYT17Q9BSW7 474 aa20.71■□□□□ 0.91
LPCAT4-204ENST00000563240 POLD1P28340 1107 aa20.69■□□□□ 0.9
LPCAT4-204ENST00000563240 AMOTQ4VCS5 1084 aa20.69■□□□□ 0.9
LPCAT4-204ENST00000563240 LOC102724428A0A0B4J2F2 783 aa20.68■□□□□ 0.9
LPCAT4-204ENST00000563240 HMOX1P09601 288 aa20.68■□□□□ 0.9
LPCAT4-204ENST00000563240 SIK1P57059 783 aa20.68■□□□□ 0.9
LPCAT4-204ENST00000563240 SMIM5Q71RC9 77 aa20.68■□□□□ 0.9
LPCAT4-204ENST00000563240 ATG3Q9NT62 314 aa20.68■□□□□ 0.9
LPCAT4-204ENST00000563240 ITGB4P16144 1822 aa20.67■□□□□ 0.9
LPCAT4-204ENST00000563240 HSP90AB1P08238 724 aaKnown RBP20.67■□□□□ 0.9
LPCAT4-204ENST00000563240 MSL1Q68DK7 614 aa20.67■□□□□ 0.9
LPCAT4-204ENST00000563240 DCAF5Q96JK2 942 aa20.67■□□□□ 0.9
LPCAT4-204ENST00000563240 AK7Q96M32 723 aa20.67■□□□□ 0.9
LPCAT4-204ENST00000563240 ATP6V1AP38606 617 aa20.66■□□□□ 0.9
LPCAT4-204ENST00000563240 CABP4P57796 275 aa20.66■□□□□ 0.9
LPCAT4-204ENST00000563240 C1orf141Q5JVX7 400 aa20.66■□□□□ 0.9
LPCAT4-204ENST00000563240 ERVV-2B6SEH9 535 aa20.65■□□□□ 0.9
LPCAT4-204ENST00000563240 PHF14O94880 888 aa20.65■□□□□ 0.9
LPCAT4-204ENST00000563240 LINC00116Q8NCU8 138 aa20.65■□□□□ 0.9
LPCAT4-204ENST00000563240 DIAPH1O60610 1272 aaKnown RBP20.64■□□□□ 0.89
LPCAT4-204ENST00000563240 HMGB2P26583 209 aaKnown RBP20.64■□□□□ 0.89
LPCAT4-204ENST00000563240 ITPK1Q13572 414 aa20.64■□□□□ 0.89
LPCAT4-204ENST00000563240 AMIGO3Q86WK7 504 aa20.64■□□□□ 0.89
LPCAT4-204ENST00000563240 PLEKHG2Q9H7P9 1386 aa20.63■□□□□ 0.89
LPCAT4-204ENST00000563240 RBM42Q9BTD8 480 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms