RNA–Protein interactions for RNA: ENST00000563180.1

IRF8-203, Transcript of interferon regulatory factor 8, humanhuman

TSL 1 (best) BASIC

Gene IRF8, Length 1,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-203ENST00000563180 SHANK3Q9BYB0 1731 aa23.06■■□□□ 1.28
IRF8-203ENST00000563180 AEBP1Q8IUX7 1158 aa23.06■■□□□ 1.28
IRF8-203ENST00000563180 CCDC125Q86Z20 511 aa23.05■■□□□ 1.28
IRF8-203ENST00000563180 U2SURPO15042 1029 aaKnown RBP23.04■■□□□ 1.28
IRF8-203ENST00000563180 TRIM37O94972 964 aa23.04■■□□□ 1.28
IRF8-203ENST00000563180 SBF2Q86WG5 1849 aa23.04■■□□□ 1.28
IRF8-203ENST00000563180 PRKRIP1Q9H875 184 aaPredicted RBP23.03■■□□□ 1.28
IRF8-203ENST00000563180 PKD1L3Q7Z443 1732 aa23.03■■□□□ 1.28
IRF8-203ENST00000563180 HMOX1P09601 288 aa23.02■■□□□ 1.28
IRF8-203ENST00000563180 SF3B2Q13435 895 aaKnown RBP23.02■■□□□ 1.28
IRF8-203ENST00000563180 SPG7Q9UQ90 795 aa23.02■■□□□ 1.28
IRF8-203ENST00000563180 EP400Q96L91 3159 aa23.02■■□□□ 1.28
IRF8-203ENST00000563180 MYBBP1AQ9BQG0 1328 aaKnown RBP23.02■■□□□ 1.28
IRF8-203ENST00000563180 KDRP35968 1356 aa23.01■■□□□ 1.27
IRF8-203ENST00000563180 NUDCQ9Y266 331 aa23.01■■□□□ 1.27
IRF8-203ENST00000563180 PCDH11XQ9BZA7 1347 aa23■■□□□ 1.27
IRF8-203ENST00000563180 PCDH11YQ9BZA8 1340 aa23■■□□□ 1.27
IRF8-203ENST00000563180 BCL9O00512 1426 aa23■■□□□ 1.27
IRF8-203ENST00000563180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23■■□□□ 1.27
IRF8-203ENST00000563180 TNS1Q9HBL0 1735 aaKnown RBP22.99■■□□□ 1.27
IRF8-203ENST00000563180 KAT6BQ8WYB5 2073 aa22.98■■□□□ 1.27
IRF8-203ENST00000563180 CYP27B1O15528 508 aa22.98■■□□□ 1.27
IRF8-203ENST00000563180 PLEKHO1Q53GL0 409 aaPredicted RBP22.98■■□□□ 1.27
IRF8-203ENST00000563180 ACSBG1Q96GR2 724 aa22.98■■□□□ 1.27
IRF8-203ENST00000563180 PTF1AQ7RTS3 328 aa22.96■■□□□ 1.27
IRF8-203ENST00000563180 PLEKHG2Q9H7P9 1386 aa22.96■■□□□ 1.27
IRF8-203ENST00000563180 KCNQ2O43526 872 aa22.95■■□□□ 1.26
IRF8-203ENST00000563180 APBA3O96018 575 aa22.95■■□□□ 1.26
IRF8-203ENST00000563180 U2AF1L5P0DN76 240 aaPredicted RBP22.95■■□□□ 1.26
IRF8-203ENST00000563180 U2AF1Q01081 240 aaKnown RBP eCLIP22.95■■□□□ 1.26
IRF8-203ENST00000563180 AMOTQ4VCS5 1084 aa22.95■■□□□ 1.26
IRF8-203ENST00000563180 DEFB132Q7Z7B7 95 aa22.95■■□□□ 1.26
IRF8-203ENST00000563180 BCL11BQ9C0K0 894 aaPredicted RBP22.95■■□□□ 1.26
IRF8-203ENST00000563180 BAG6P46379 1132 aa22.94■■□□□ 1.26
IRF8-203ENST00000563180 DOT1LQ8TEK3 1739 aa22.93■■□□□ 1.26
IRF8-203ENST00000563180 NHSQ6T4R5 1651 aa22.93■■□□□ 1.26
IRF8-203ENST00000563180 ZNF530Q6P9A1 599 aaPredicted RBP22.93■■□□□ 1.26
IRF8-203ENST00000563180 IFNL2Q8IZJ0 200 aa22.93■■□□□ 1.26
IRF8-203ENST00000563180 ANP32CO43423 234 aa22.92■■□□□ 1.26
IRF8-203ENST00000563180 PHKG2P15735 406 aa22.92■■□□□ 1.26
IRF8-203ENST00000563180 PRIM1P49642 420 aaKnown RBP22.91■■□□□ 1.26
IRF8-203ENST00000563180 EN1Q05925 392 aaPredicted RBP22.9■■□□□ 1.26
IRF8-203ENST00000563180 NKX1-1Q15270 411 aaPredicted RBP22.9■■□□□ 1.26
IRF8-203ENST00000563180 SYTL4Q96C24 671 aaPredicted RBP22.89■■□□□ 1.26
IRF8-203ENST00000563180 RSPH6AQ9H0K4 717 aa22.89■■□□□ 1.26
IRF8-203ENST00000563180 PRKAR2BP31323 418 aa22.89■■□□□ 1.25
IRF8-203ENST00000563180 C1orf141Q5JVX7 400 aa22.89■■□□□ 1.25
IRF8-203ENST00000563180 FCHSD2O94868 740 aa22.88■■□□□ 1.25
IRF8-203ENST00000563180 BTAF1O14981 1849 aa22.87■■□□□ 1.25
IRF8-203ENST00000563180 TOGARAM1Q9Y4F4 1720 aa22.87■■□□□ 1.25
IRF8-203ENST00000563180 MTHFSDQ2M296 383 aaKnown RBP22.87■■□□□ 1.25
IRF8-203ENST00000563180 HSP90AB1P08238 724 aaKnown RBP22.86■■□□□ 1.25
IRF8-203ENST00000563180 EZH2Q15910 746 aaKnown RBP22.86■■□□□ 1.25
IRF8-203ENST00000563180 CAMKK2Q96RR4 588 aa22.86■■□□□ 1.25
IRF8-203ENST00000563180 ITGB4P16144 1822 aa22.86■■□□□ 1.25
IRF8-203ENST00000563180 PHACTR3Q96KR7 559 aa22.85■■□□□ 1.25
IRF8-203ENST00000563180 PLSCR1O15162 318 aa22.84■■□□□ 1.25
IRF8-203ENST00000563180 AKAP4Q5JQC9 854 aa22.84■■□□□ 1.25
IRF8-203ENST00000563180 MPRIPQ6WCQ1 1025 aa22.83■■□□□ 1.25
IRF8-203ENST00000563180 DCAF5Q96JK2 942 aa22.83■■□□□ 1.25
IRF8-203ENST00000563180 WDR43Q15061 677 aaKnown RBP eCLIP22.81■■□□□ 1.24
IRF8-203ENST00000563180 GAS2L2Q8NHY3 880 aa22.81■■□□□ 1.24
IRF8-203ENST00000563180 KDM6AO15550 1401 aaPredicted RBP22.81■■□□□ 1.24
IRF8-203ENST00000563180 CCDC184Q52MB2 194 aa22.8■■□□□ 1.24
IRF8-203ENST00000563180 RGPD3A6NKT7 1758 aaPredicted RBP22.8■■□□□ 1.24
IRF8-203ENST00000563180 RGPD4Q7Z3J3 1758 aa22.8■■□□□ 1.24
IRF8-203ENST00000563180 SCN11AQ9UI33 1791 aa22.79■■□□□ 1.24
IRF8-203ENST00000563180 ERVV-2B6SEH9 535 aa22.79■■□□□ 1.24
IRF8-203ENST00000563180 PIGBQ92521 554 aa22.79■■□□□ 1.24
IRF8-203ENST00000563180 PNNQ9H307 717 aaKnown RBP22.79■■□□□ 1.24
IRF8-203ENST00000563180 TMOD3Q9NYL9 352 aa22.79■■□□□ 1.24
IRF8-203ENST00000563180 VIRMAQ69YN4 1812 aaKnown RBP22.79■■□□□ 1.24
IRF8-203ENST00000563180 NEFMP07197 916 aa22.78■■□□□ 1.24
IRF8-203ENST00000563180 PLEKHF1Q96S99 279 aa22.78■■□□□ 1.24
IRF8-203ENST00000563180 LGR6Q9HBX8 967 aa22.78■■□□□ 1.24
IRF8-203ENST00000563180 RREB1Q92766 1687 aa22.78■■□□□ 1.24
IRF8-203ENST00000563180 RNMTO43148 476 aaKnown RBP22.76■■□□□ 1.23
IRF8-203ENST00000563180 CABP4P57796 275 aa22.76■■□□□ 1.23
IRF8-203ENST00000563180 PROM2Q8N271 834 aa22.76■■□□□ 1.23
IRF8-203ENST00000563180 MAP3K5Q99683 1374 aa22.76■■□□□ 1.23
IRF8-203ENST00000563180 GNAT3A8MTJ3 354 aa22.76■■□□□ 1.23
IRF8-203ENST00000563180 TXNRD1Q16881 649 aa22.76■■□□□ 1.23
IRF8-203ENST00000563180 ADAMTS8Q9UP79 889 aa22.76■■□□□ 1.23
IRF8-203ENST00000563180 MAPK8IP3Q9UPT6 1336 aa22.74■■□□□ 1.23
IRF8-203ENST00000563180 NUP188Q5SRE5 1749 aa22.74■■□□□ 1.23
IRF8-203ENST00000563180 MRS2Q9HD23 443 aa22.74■■□□□ 1.23
IRF8-203ENST00000563180 ADAMTS7Q9UKP4 1686 aa22.73■■□□□ 1.23
IRF8-203ENST00000563180 CCDC146Q8IYE0 955 aa22.73■■□□□ 1.23
IRF8-203ENST00000563180 NFATC2IPQ8NCF5 419 aa22.73■■□□□ 1.23
IRF8-203ENST00000563180 LY75O60449 1722 aa22.72■■□□□ 1.23
IRF8-203ENST00000563180 IL17REQ8NFR9 667 aa22.72■■□□□ 1.23
IRF8-203ENST00000563180 SMARCC1Q92922 1105 aaPredicted RBP22.72■■□□□ 1.23
IRF8-203ENST00000563180 ASAP1Q9ULH1 1129 aa22.72■■□□□ 1.23
IRF8-203ENST00000563180 DLG5Q8TDM6 1919 aa22.71■■□□□ 1.23
IRF8-203ENST00000563180 NFE2L2Q16236 605 aa22.7■■□□□ 1.22
IRF8-203ENST00000563180 PALLDQ8WX93 1383 aa22.7■■□□□ 1.22
IRF8-203ENST00000563180 SLC52A2Q9HAB3 445 aa22.7■■□□□ 1.22
IRF8-203ENST00000563180 RTF1Q92541 710 aaKnown RBP22.69■■□□□ 1.22
IRF8-203ENST00000563180 RUNDC1Q96C34 613 aa22.69■■□□□ 1.22
IRF8-203ENST00000563180 ATG3Q9NT62 314 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms