RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	ZNF827	Q17R98	1081 aa		12.06	□□□□□ -0.48
CKLF-208	ENST00000563092	LRRC4B	Q9NT99	713 aa		12.06	□□□□□ -0.48
CKLF-208	ENST00000563092	ERBB3	P21860	1342 aa		12.06	□□□□□ -0.48
CKLF-208	ENST00000563092	EVC2	Q86UK5	1308 aa		12.06	□□□□□ -0.48
CKLF-208	ENST00000563092	SLC16A10	Q8TF71	515 aa		12.05	□□□□□ -0.48
CKLF-208	ENST00000563092	QSER1	Q2KHR3	1735 aa		12.05	□□□□□ -0.48
CKLF-208	ENST00000563092	CSB-PGBD3	P0DP91	1061 aa		12.04	□□□□□ -0.48
CKLF-208	ENST00000563092	IFFO2	Q5TF58	517 aa		12.04	□□□□□ -0.48
CKLF-208	ENST00000563092	BTAF1	O14981	1849 aa		12.04	□□□□□ -0.48
CKLF-208	ENST00000563092	SHANK3	Q9BYB0	1731 aa		12.03	□□□□□ -0.48
CKLF-208	ENST00000563092	IL2RB	P14784	551 aa		12.02	□□□□□ -0.49
CKLF-208	ENST00000563092	SLC27A3	Q5K4L6	730 aa		12.02	□□□□□ -0.49
CKLF-208	ENST00000563092	ACSBG1	Q96GR2	724 aa		12.02	□□□□□ -0.49
CKLF-208	ENST00000563092	MON2	Q7Z3U7	1717 aa		12.02	□□□□□ -0.49
CKLF-208	ENST00000563092	CD163L1	Q9NR16	1453 aa		12.02	□□□□□ -0.49
CKLF-208	ENST00000563092	PNPLA7	Q6ZV29	1317 aa		12.01	□□□□□ -0.49
CKLF-208	ENST00000563092	KTN1	Q86UP2	1357 aa	Known RBP	12.01	□□□□□ -0.49
CKLF-208	ENST00000563092	SBNO2	Q9Y2G9	1366 aa		12.01	□□□□□ -0.49
CKLF-208	ENST00000563092	SOX12	O15370	315 aa		12	□□□□□ -0.49
CKLF-208	ENST00000563092	GPR162	Q16538	588 aa		12	□□□□□ -0.49
CKLF-208	ENST00000563092	GIGYF1	O75420	1035 aa	Predicted RBP	11.99	□□□□□ -0.49
CKLF-208	ENST00000563092	L3MBTL2	Q969R5	705 aa		11.99	□□□□□ -0.49
CKLF-208	ENST00000563092	NSD2	O96028	1365 aa		11.98	□□□□□ -0.49
CKLF-208	ENST00000563092	NLRP2	Q9NX02	1062 aa		11.98	□□□□□ -0.49
CKLF-208	ENST00000563092	C19orf67	A6NJJ6	358 aa		11.97	□□□□□ -0.49
CKLF-208	ENST00000563092	NLGN2	Q8NFZ4	835 aa		11.97	□□□□□ -0.49
CKLF-208	ENST00000563092	ANKRD24	Q8TF21	1146 aa		11.97	□□□□□ -0.49
CKLF-208	ENST00000563092	TUBGCP6	Q96RT7	1819 aa		11.97	□□□□□ -0.49
CKLF-208	ENST00000563092	LTN1	O94822	1766 aa		11.97	□□□□□ -0.49
CKLF-208	ENST00000563092	LY75	O60449	1722 aa		11.97	□□□□□ -0.49
CKLF-208	ENST00000563092	ANKRD36B	Q8N2N9	1353 aa		11.96	□□□□□ -0.49
CKLF-208	ENST00000563092	YBX3	P16989	372 aa	Known RBP eCLIP	11.96	□□□□□ -0.49	1e-7	■■■■□ 20.5
CKLF-208	ENST00000563092	POLD1	P28340	1107 aa		11.96	□□□□□ -0.49
CKLF-208	ENST00000563092	NME9	Q86XW9	330 aa		11.96	□□□□□ -0.49
CKLF-208	ENST00000563092	EDC4	Q6P2E9	1401 aa	Known RBP	11.94	□□□□□ -0.5
CKLF-208	ENST00000563092	ROCK2	O75116	1388 aa	Known RBP	11.94	□□□□□ -0.5
CKLF-208	ENST00000563092	FAM208A	Q9UK61	1670 aa	Known RBP	11.94	□□□□□ -0.5
CKLF-208	ENST00000563092	GRIN3B	O60391	1043 aa		11.94	□□□□□ -0.5
CKLF-208	ENST00000563092	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CKLF-208	ENST00000563092	IP6K1	Q92551	441 aa		11.94	□□□□□ -0.5
CKLF-208	ENST00000563092	TFCP2L1	Q9NZI6	479 aa		11.94	□□□□□ -0.5
CKLF-208	ENST00000563092	ADCY9	O60503	1353 aa		11.93	□□□□□ -0.5
CKLF-208	ENST00000563092	PRIM1	P49642	420 aa	Known RBP	11.92	□□□□□ -0.5
CKLF-208	ENST00000563092	KCNQ4	P56696	695 aa		11.92	□□□□□ -0.5
CKLF-208	ENST00000563092	CHADL	Q6NUI6	762 aa		11.92	□□□□□ -0.5
CKLF-208	ENST00000563092	COL23A1	Q86Y22	540 aa	Predicted RBP	11.91	□□□□□ -0.5
CKLF-208	ENST00000563092	DDX54	Q8TDD1	881 aa	Known RBP	11.91	□□□□□ -0.5
CKLF-208	ENST00000563092	PUS7	Q96PZ0	661 aa	Known RBP	11.91	□□□□□ -0.5
CKLF-208	ENST00000563092	ATP10D	Q9P241	1426 aa		11.91	□□□□□ -0.5
CKLF-208	ENST00000563092	DOT1L	Q8TEK3	1739 aa		11.91	□□□□□ -0.5
CKLF-208	ENST00000563092	PRR29	P0C7W0	189 aa		11.9	□□□□□ -0.5
CKLF-208	ENST00000563092	CD2AP	Q9Y5K6	639 aa		11.9	□□□□□ -0.5
CKLF-208	ENST00000563092		A0A1W2PP64	1363 aa		11.9	□□□□□ -0.5
CKLF-208	ENST00000563092	KLHL34	Q8N239	644 aa		11.89	□□□□□ -0.51
CKLF-208	ENST00000563092	SLC12A5	Q9H2X9	1139 aa		11.89	□□□□□ -0.51
CKLF-208	ENST00000563092	MEGF6	O75095	1541 aa		11.89	□□□□□ -0.51
CKLF-208	ENST00000563092	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.88	□□□□□ -0.51
CKLF-208	ENST00000563092	PELP1	Q8IZL8	1130 aa	Known RBP	11.88	□□□□□ -0.51
CKLF-208	ENST00000563092	ZCRB1	Q8TBF4	217 aa	Known RBP	11.88	□□□□□ -0.51
CKLF-208	ENST00000563092	CCNL1	Q9UK58	526 aa	Predicted RBP	11.88	□□□□□ -0.51
CKLF-208	ENST00000563092	MAP3K19	Q56UN5	1328 aa		11.87	□□□□□ -0.51
CKLF-208	ENST00000563092	HSPA6	P17066	643 aa		11.87	□□□□□ -0.51
CKLF-208	ENST00000563092	HOXC9	P31274	260 aa		11.87	□□□□□ -0.51
CKLF-208	ENST00000563092	SIN3A	Q96ST3	1273 aa		11.87	□□□□□ -0.51
CKLF-208	ENST00000563092	CGNL1	Q0VF96	1302 aa		11.86	□□□□□ -0.51
CKLF-208	ENST00000563092	SYTL4	Q96C24	671 aa	Predicted RBP	11.86	□□□□□ -0.51
CKLF-208	ENST00000563092	TERF2IP	Q9NYB0	399 aa		11.86	□□□□□ -0.51
CKLF-208	ENST00000563092	USP47	Q96K76	1375 aa		11.86	□□□□□ -0.51
CKLF-208	ENST00000563092	C5	P01031	1676 aa		11.85	□□□□□ -0.51
CKLF-208	ENST00000563092	RTL1	A6NKG5	1358 aa		11.85	□□□□□ -0.51
CKLF-208	ENST00000563092	HMGB2	P26583	209 aa	Known RBP	11.84	□□□□□ -0.51
CKLF-208	ENST00000563092	FLAD1	Q8NFF5	587 aa		11.84	□□□□□ -0.51
CKLF-208	ENST00000563092	TMC1	Q8TDI8	760 aa		11.84	□□□□□ -0.51
CKLF-208	ENST00000563092	LTV1	Q96GA3	475 aa	Predicted RBP	11.84	□□□□□ -0.51
CKLF-208	ENST00000563092	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.84	□□□□□ -0.51
CKLF-208	ENST00000563092	TOGARAM1	Q9Y4F4	1720 aa		11.83	□□□□□ -0.52
CKLF-208	ENST00000563092	CIC	Q96RK0	1608 aa	Predicted RBP	11.83	□□□□□ -0.52
CKLF-208	ENST00000563092	RGPD2	P0DJD1	1756 aa		11.83	□□□□□ -0.52
CKLF-208	ENST00000563092	NBPF6	Q5VWK0	638 aa		11.83	□□□□□ -0.52
CKLF-208	ENST00000563092	MSL1	Q68DK7	614 aa		11.83	□□□□□ -0.52
CKLF-208	ENST00000563092	AMIGO3	Q86WK7	504 aa		11.83	□□□□□ -0.52
CKLF-208	ENST00000563092	NBPF4	Q96M43	638 aa		11.83	□□□□□ -0.52
CKLF-208	ENST00000563092	KAT6B	Q8WYB5	2073 aa		11.83	□□□□□ -0.52
CKLF-208	ENST00000563092	TAF1L	Q8IZX4	1826 aa		11.82	□□□□□ -0.52
CKLF-208	ENST00000563092	GABBR2	O75899	941 aa		11.82	□□□□□ -0.52
CKLF-208	ENST00000563092	FBLN1	P23142	703 aa		11.82	□□□□□ -0.52
CKLF-208	ENST00000563092	TESK2	Q96S53	571 aa		11.82	□□□□□ -0.52
CKLF-208	ENST00000563092	CARD11	Q9BXL7	1154 aa		11.82	□□□□□ -0.52
CKLF-208	ENST00000563092	PALLD	Q8WX93	1383 aa		11.81	□□□□□ -0.52
CKLF-208	ENST00000563092	C4B	P0C0L5	1744 aa		11.81	□□□□□ -0.52
CKLF-208	ENST00000563092	KIF3C	O14782	793 aa		11.81	□□□□□ -0.52
CKLF-208	ENST00000563092	COG3	Q96JB2	828 aa		11.81	□□□□□ -0.52
CKLF-208	ENST00000563092	NCAPD2	Q15021	1401 aa		11.8	□□□□□ -0.52
CKLF-208	ENST00000563092	AMPH	P49418	695 aa		11.8	□□□□□ -0.52
CKLF-208	ENST00000563092	DNAJC5G	Q8N7S2	189 aa		11.79	□□□□□ -0.52
CKLF-208	ENST00000563092	IGSF1	Q8N6C5	1336 aa		11.79	□□□□□ -0.52
CKLF-208	ENST00000563092	PCDH11X	Q9BZA7	1347 aa		11.79	□□□□□ -0.52
CKLF-208	ENST00000563092	PCDH11Y	Q9BZA8	1340 aa		11.79	□□□□□ -0.52
CKLF-208	ENST00000563092	INSR	P06213	1382 aa		11.79	□□□□□ -0.52
CKLF-208	ENST00000563092	KIF24	Q5T7B8	1368 aa		11.79	□□□□□ -0.52

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