RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 AKT1S1Q96B36 256 aa29.66■■■□□ 2.34
GGA2-204ENST00000563047 SLC27A3Q5K4L6 730 aa29.65■■■□□ 2.34
GGA2-204ENST00000563047 NBPF6Q5VWK0 638 aa29.65■■■□□ 2.34
GGA2-204ENST00000563047 SYTL4Q96C24 671 aaPredicted RBP29.65■■■□□ 2.34
GGA2-204ENST00000563047 NBPF4Q96M43 638 aa29.65■■■□□ 2.34
GGA2-204ENST00000563047 NSD2O96028 1365 aa29.64■■■□□ 2.33
GGA2-204ENST00000563047 ARXQ96QS3 562 aa29.62■■■□□ 2.33
GGA2-204ENST00000563047 KCNQ4P56696 695 aa29.61■■■□□ 2.33
GGA2-204ENST00000563047 USHBP1Q8N6Y0 703 aa29.61■■■□□ 2.33
GGA2-204ENST00000563047 QSER1Q2KHR3 1735 aa29.6■■■□□ 2.33
GGA2-204ENST00000563047 LY75O60449 1722 aa29.59■■■□□ 2.33
GGA2-204ENST00000563047 KIF20BQ96Q89 1820 aa29.59■■■□□ 2.33
GGA2-204ENST00000563047 CDCA8Q53HL2 280 aa29.58■■■□□ 2.33
GGA2-204ENST00000563047 SMG6Q86US8 1419 aaKnown RBP29.57■■■□□ 2.32
GGA2-204ENST00000563047 PNPLA7Q6ZV29 1317 aa29.57■■■□□ 2.32
GGA2-204ENST00000563047 HSP90AB2PQ58FF8 381 aa29.57■■■□□ 2.32
GGA2-204ENST00000563047 TUBGCP6Q96RT7 1819 aa29.57■■■□□ 2.32
GGA2-204ENST00000563047 CGNL1Q0VF96 1302 aa29.56■■■□□ 2.32
GGA2-204ENST00000563047 UTRNP46939 3433 aa29.55■■■□□ 2.32
GGA2-204ENST00000563047 INSRP06213 1382 aa29.55■■■□□ 2.32
GGA2-204ENST00000563047 MAP3K5Q99683 1374 aa29.55■■■□□ 2.32
GGA2-204ENST00000563047 SLC16A10Q8TF71 515 aa29.55■■■□□ 2.32
GGA2-204ENST00000563047 RAPGEF4Q8WZA2 1011 aa29.55■■■□□ 2.32
GGA2-204ENST00000563047 CARD14Q9BXL6 1004 aa29.55■■■□□ 2.32
GGA2-204ENST00000563047 TFCP2L1Q9NZI6 479 aa29.54■■■□□ 2.32
GGA2-204ENST00000563047 FLT4P35916 1363 aa29.53■■■□□ 2.32
GGA2-204ENST00000563047 COL24A1Q17RW2 1714 aa29.52■■■□□ 2.32
GGA2-204ENST00000563047 KIF24Q5T7B8 1368 aa29.52■■■□□ 2.32
GGA2-204ENST00000563047 TATP17735 454 aaPredicted RBP29.51■■■□□ 2.31
GGA2-204ENST00000563047 CCNL1Q9UK58 526 aaPredicted RBP29.51■■■□□ 2.31
GGA2-204ENST00000563047 NSD3Q9BZ95 1437 aa29.5■■■□□ 2.31
GGA2-204ENST00000563047 EMILIN1Q9Y6C2 1016 aa29.48■■■□□ 2.31
GGA2-204ENST00000563047 POLD1P28340 1107 aa29.47■■■□□ 2.31
GGA2-204ENST00000563047 PCDH11XQ9BZA7 1347 aa29.46■■■□□ 2.31
GGA2-204ENST00000563047 PCDH11YQ9BZA8 1340 aa29.46■■■□□ 2.31
GGA2-204ENST00000563047 ZNF784Q8NCA9 323 aaPredicted RBP29.45■■■□□ 2.31
GGA2-204ENST00000563047 TIMELESSQ9UNS1 1208 aa29.44■■■□□ 2.3
GGA2-204ENST00000563047 CHD4Q14839 1912 aa29.43■■■□□ 2.3
GGA2-204ENST00000563047 CYP27B1O15528 508 aa29.43■■■□□ 2.3
GGA2-204ENST00000563047 KLHL34Q8N239 644 aa29.43■■■□□ 2.3
GGA2-204ENST00000563047 COL23A1Q86Y22 540 aaPredicted RBP29.41■■■□□ 2.3
GGA2-204ENST00000563047 NCAPD2Q15021 1401 aa29.4■■■□□ 2.3
GGA2-204ENST00000563047 PKD1L3Q7Z443 1732 aa29.4■■■□□ 2.3
GGA2-204ENST00000563047 ANKRD26Q9UPS8 1709 aa29.4■■■□□ 2.3
GGA2-204ENST00000563047 TOGARAM1Q9Y4F4 1720 aa29.4■■■□□ 2.3
GGA2-204ENST00000563047 GPR162Q16538 588 aa29.39■■■□□ 2.3
GGA2-204ENST00000563047 C5P01031 1676 aa29.39■■■□□ 2.3
GGA2-204ENST00000563047 PPM1GO15355 546 aaPredicted RBP29.38■■■□□ 2.29
GGA2-204ENST00000563047 MPRIPQ6WCQ1 1025 aa29.38■■■□□ 2.29
GGA2-204ENST00000563047 PALLDQ8WX93 1383 aa29.38■■■□□ 2.29
GGA2-204ENST00000563047 MSH5O43196 834 aa29.37■■■□□ 2.29
GGA2-204ENST00000563047 NLGN2Q8NFZ4 835 aa29.37■■■□□ 2.29
GGA2-204ENST00000563047 ITGB4P16144 1822 aa29.36■■■□□ 2.29
GGA2-204ENST00000563047 WASHC2AQ641Q2 1341 aa29.36■■■□□ 2.29
GGA2-204ENST00000563047 MAP2P11137 1827 aaKnown RBP29.36■■■□□ 2.29
GGA2-204ENST00000563047 TAF1LQ8IZX4 1826 aa29.36■■■□□ 2.29
GGA2-204ENST00000563047 EYA1Q99502 592 aa29.33■■■□□ 2.29
GGA2-204ENST00000563047 CLSPNQ9HAW4 1339 aa29.33■■■□□ 2.29
GGA2-204ENST00000563047 NKX1-1Q15270 411 aaPredicted RBP29.32■■■□□ 2.28
GGA2-204ENST00000563047 MSL1Q68DK7 614 aa29.32■■■□□ 2.28
GGA2-204ENST00000563047 POLKQ9UBT6 870 aa29.32■■■□□ 2.28
GGA2-204ENST00000563047 PIGBQ92521 554 aa29.31■■■□□ 2.28
GGA2-204ENST00000563047 PELP1Q8IZL8 1130 aaKnown RBP29.3■■■□□ 2.28
GGA2-204ENST00000563047 SMARCC1Q92922 1105 aaPredicted RBP29.3■■■□□ 2.28
GGA2-204ENST00000563047 PCGF6Q9BYE7 350 aa29.3■■■□□ 2.28
GGA2-204ENST00000563047 SPG7Q9UQ90 795 aa29.3■■■□□ 2.28
GGA2-204ENST00000563047 GOLGB1Q14789 3259 aaKnown RBP29.3■■■□□ 2.28
GGA2-204ENST00000563047 C4BP0C0L5 1744 aa29.28■■■□□ 2.28
GGA2-204ENST00000563047 HMGB2P26583 209 aaKnown RBP29.28■■■□□ 2.28
GGA2-204ENST00000563047 POLR3GLQ9BT43 218 aa29.28■■■□□ 2.28
GGA2-204ENST00000563047 FLAD1Q8NFF5 587 aa29.27■■■□□ 2.28
GGA2-204ENST00000563047 AMIGO3Q86WK7 504 aa29.26■■■□□ 2.27
GGA2-204ENST00000563047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.26■■■□□ 2.275e-10■■■□□ 17.5
GGA2-204ENST00000563047 YBX3P16989 372 aaKnown RBP eCLIP29.23■■■□□ 2.278e-9■□□□□ 9.2
GGA2-204ENST00000563047 TNNT2P45379 298 aaPredicted RBP29.23■■■□□ 2.27
GGA2-204ENST00000563047 EIF4A2Q14240 407 aaKnown RBP29.23■■■□□ 2.27
GGA2-204ENST00000563047 AK7Q96M32 723 aa29.23■■■□□ 2.27
GGA2-204ENST00000563047 UBR3Q6ZT12 1888 aa29.22■■■□□ 2.27
GGA2-204ENST00000563047 PHKG2P15735 406 aa29.21■■■□□ 2.27
GGA2-204ENST00000563047 SMIM5Q71RC9 77 aa29.21■■■□□ 2.27
GGA2-204ENST00000563047 IFNL2Q8IZJ0 200 aa29.21■■■□□ 2.27
GGA2-204ENST00000563047 LOC102724428A0A0B4J2F2 783 aa29.2■■■□□ 2.26
GGA2-204ENST00000563047 SIK1P57059 783 aa29.2■■■□□ 2.26
GGA2-204ENST00000563047 TMOD3Q9NYL9 352 aa29.2■■■□□ 2.26
GGA2-204ENST00000563047 HSPA5P11021 654 aaKnown RBP29.19■■■□□ 2.26
GGA2-204ENST00000563047 LINC00116Q8NCU8 138 aa29.19■■■□□ 2.26
GGA2-204ENST00000563047 ASAP1Q9ULH1 1129 aa29.19■■■□□ 2.26
GGA2-204ENST00000563047 PHF14O94880 888 aa29.18■■■□□ 2.26
GGA2-204ENST00000563047 EIF4G2P78344 907 aaKnown RBP eCLIP29.18■■■□□ 2.26
GGA2-204ENST00000563047 CD2APQ9Y5K6 639 aa29.18■■■□□ 2.26
GGA2-204ENST00000563047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.16■■■□□ 2.26
GGA2-204ENST00000563047 GRIN3BO60391 1043 aa29.16■■■□□ 2.26
GGA2-204ENST00000563047 PANK3Q9H999 370 aa29.16■■■□□ 2.26
GGA2-204ENST00000563047 ITPK1Q13572 414 aa29.15■■■□□ 2.26
GGA2-204ENST00000563047 IGSF1Q8N6C5 1336 aa29.15■■■□□ 2.26
GGA2-204ENST00000563047 SSFA2P28290 1259 aa29.14■■■□□ 2.26
GGA2-204ENST00000563047 C1QTNF8P60827 252 aa29.14■■■□□ 2.26
GGA2-204ENST00000563047 PLEKHG2Q9H7P9 1386 aa29.13■■■□□ 2.25
GGA2-204ENST00000563047 ATG3Q9NT62 314 aa29.13■■■□□ 2.25
GGA2-204ENST00000563047 ATP6V1AP38606 617 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms