RNA–Protein interactions for RNA: ENST00000562946.5

TMEM87A-205, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-205ENST00000562946 EN1Q05925 392 aaPredicted RBP12.08□□□□□ -0.48
TMEM87A-205ENST00000562946 EMILIN1Q9Y6C2 1016 aa12.08□□□□□ -0.48
TMEM87A-205ENST00000562946 BCL9O00512 1426 aa12.07□□□□□ -0.48
TMEM87A-205ENST00000562946 TNS2Q63HR2 1409 aa12.07□□□□□ -0.48
TMEM87A-205ENST00000562946 SHANK3Q9BYB0 1731 aa12.07□□□□□ -0.48
TMEM87A-205ENST00000562946 CACNB1Q02641 598 aaPredicted RBP12.06□□□□□ -0.48
TMEM87A-205ENST00000562946 NBPF6Q5VWK0 638 aa12.06□□□□□ -0.48
TMEM87A-205ENST00000562946 NBPF4Q96M43 638 aa12.06□□□□□ -0.48
TMEM87A-205ENST00000562946 POLKQ9UBT6 870 aa12.06□□□□□ -0.48
TMEM87A-205ENST00000562946 NSD2O96028 1365 aa12.06□□□□□ -0.48
TMEM87A-205ENST00000562946 APBA3O96018 575 aa12.05□□□□□ -0.48
TMEM87A-205ENST00000562946 CAMKK2Q96RR4 588 aa12.05□□□□□ -0.48
TMEM87A-205ENST00000562946 RREB1Q92766 1687 aa12.05□□□□□ -0.48
TMEM87A-205ENST00000562946 WASHC2AQ641Q2 1341 aa12.05□□□□□ -0.48
TMEM87A-205ENST00000562946 RGPD3A6NKT7 1758 aaPredicted RBP12.04□□□□□ -0.48
TMEM87A-205ENST00000562946 RGPD4Q7Z3J3 1758 aa12.04□□□□□ -0.48
TMEM87A-205ENST00000562946 PER1O15534 1290 aaPredicted RBP12.04□□□□□ -0.48
TMEM87A-205ENST00000562946 EZH2Q15910 746 aaKnown RBP12.04□□□□□ -0.48
TMEM87A-205ENST00000562946 PTF1AQ7RTS3 328 aa12.04□□□□□ -0.48
TMEM87A-205ENST00000562946 KNSTRNQ9Y448 316 aa12.04□□□□□ -0.48
TMEM87A-205ENST00000562946 SMG6Q86US8 1419 aaKnown RBP12.04□□□□□ -0.48
TMEM87A-205ENST00000562946 MEGF6O75095 1541 aa12.04□□□□□ -0.48
TMEM87A-205ENST00000562946 PPM1GO15355 546 aaPredicted RBP12.03□□□□□ -0.48
TMEM87A-205ENST00000562946 TNNT2P45379 298 aaPredicted RBP12.03□□□□□ -0.48
TMEM87A-205ENST00000562946 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
TMEM87A-205ENST00000562946 NUP188Q5SRE5 1749 aa12.03□□□□□ -0.48
TMEM87A-205ENST00000562946 NHSQ6T4R5 1651 aa12.03□□□□□ -0.48
TMEM87A-205ENST00000562946 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
TMEM87A-205ENST00000562946 BCL11BQ9C0K0 894 aaPredicted RBP12.03□□□□□ -0.48
TMEM87A-205ENST00000562946 PARD3Q8TEW0 1356 aa12.02□□□□□ -0.48
TMEM87A-205ENST00000562946 NCAPD2Q15021 1401 aa12.02□□□□□ -0.49
TMEM87A-205ENST00000562946 BTAF1O14981 1849 aa12.01□□□□□ -0.49
TMEM87A-205ENST00000562946 PLSCR1O15162 318 aa12.01□□□□□ -0.49
TMEM87A-205ENST00000562946 KCNQ2O43526 872 aa12.01□□□□□ -0.49
TMEM87A-205ENST00000562946 MORC1Q86VD1 984 aa12.01□□□□□ -0.49
TMEM87A-205ENST00000562946 ZCRB1Q8TBF4 217 aaKnown RBP12□□□□□ -0.49
TMEM87A-205ENST00000562946 DDX54Q8TDD1 881 aaKnown RBP12□□□□□ -0.49
TMEM87A-205ENST00000562946 EYA1Q99502 592 aa12□□□□□ -0.49
TMEM87A-205ENST00000562946 PKD1L3Q7Z443 1732 aa12□□□□□ -0.49
TMEM87A-205ENST00000562946 DOT1LQ8TEK3 1739 aa11.99□□□□□ -0.49
TMEM87A-205ENST00000562946 SPDYE4A6NLX3 237 aa11.99□□□□□ -0.49
TMEM87A-205ENST00000562946 ABCB7O75027 752 aa11.99□□□□□ -0.49
TMEM87A-205ENST00000562946 EIF4A2Q14240 407 aaKnown RBP11.99□□□□□ -0.49
TMEM87A-205ENST00000562946 RAPGEF4Q8WZA2 1011 aa11.99□□□□□ -0.49
TMEM87A-205ENST00000562946 ACSBG1Q96GR2 724 aa11.99□□□□□ -0.49
TMEM87A-205ENST00000562946 TATP17735 454 aaPredicted RBP11.98□□□□□ -0.49
TMEM87A-205ENST00000562946 PROM2Q8N271 834 aa11.98□□□□□ -0.49
TMEM87A-205ENST00000562946 NPC1L1Q9UHC9 1359 aa11.97□□□□□ -0.49
TMEM87A-205ENST00000562946 ITGB4P16144 1822 aa11.97□□□□□ -0.49
TMEM87A-205ENST00000562946 PSDA5PKW4 1024 aaPredicted RBP11.96□□□□□ -0.49
TMEM87A-205ENST00000562946 CC2D1BQ5T0F9 858 aaKnown RBP11.96□□□□□ -0.49
TMEM87A-205ENST00000562946 R3HDM1Q15032 1099 aaKnown RBP11.95□□□□□ -0.5
TMEM87A-205ENST00000562946 IGSF1Q8N6C5 1336 aa11.95□□□□□ -0.5
TMEM87A-205ENST00000562946 CYP27B1O15528 508 aa11.94□□□□□ -0.5
TMEM87A-205ENST00000562946 PCDH11XQ9BZA7 1347 aa11.94□□□□□ -0.5
TMEM87A-205ENST00000562946 PCDH11YQ9BZA8 1340 aa11.94□□□□□ -0.5
TMEM87A-205ENST00000562946 LY75O60449 1722 aa11.94□□□□□ -0.5
TMEM87A-205ENST00000562946 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
TMEM87A-205ENST00000562946 PRIM1P49642 420 aaKnown RBP11.94□□□□□ -0.5
TMEM87A-205ENST00000562946 MTHFSP49914 203 aa11.94□□□□□ -0.5
TMEM87A-205ENST00000562946 TXNRD1Q16881 649 aa11.94□□□□□ -0.5
TMEM87A-205ENST00000562946 IL13P35225 146 aa11.93□□□□□ -0.5
TMEM87A-205ENST00000562946 NBPF14Q5TI25 921 aa11.93□□□□□ -0.5
TMEM87A-205ENST00000562946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.55e-7■□□□□ 11.2
TMEM87A-205ENST00000562946 SRCAPQ6ZRS2 3230 aa11.92□□□□□ -0.5
TMEM87A-205ENST00000562946 NKX1-1Q15270 411 aaPredicted RBP11.92□□□□□ -0.5
TMEM87A-205ENST00000562946 SPG7Q9UQ90 795 aa11.92□□□□□ -0.5
TMEM87A-205ENST00000562946 PLEKHG2Q9H7P9 1386 aa11.91□□□□□ -0.5
TMEM87A-205ENST00000562946 LRP5O75197 1615 aa11.91□□□□□ -0.5
TMEM87A-205ENST00000562946 SYTL4Q96C24 671 aaPredicted RBP11.91□□□□□ -0.5
TMEM87A-205ENST00000562946 ANO8Q9HCE9 1232 aaPredicted RBP11.91□□□□□ -0.5
TMEM87A-205ENST00000562946 VIRMAQ69YN4 1812 aaKnown RBP11.9□□□□□ -0.5
TMEM87A-205ENST00000562946 CNGB1Q14028 1251 aaPredicted RBP11.9□□□□□ -0.5
TMEM87A-205ENST00000562946 AEBP1Q8IUX7 1158 aa11.9□□□□□ -0.5
TMEM87A-205ENST00000562946 PAPPAQ13219 1627 aa11.9□□□□□ -0.5
TMEM87A-205ENST00000562946 KDRP35968 1356 aa11.9□□□□□ -0.5
TMEM87A-205ENST00000562946 LRRC4BQ9NT99 713 aa11.89□□□□□ -0.51
TMEM87A-205ENST00000562946 CASZ1Q86V15 1759 aa11.89□□□□□ -0.51
TMEM87A-205ENST00000562946 TAF1LQ8IZX4 1826 aa11.88□□□□□ -0.51
TMEM87A-205ENST00000562946 PHKG2P15735 406 aa11.88□□□□□ -0.51
TMEM87A-205ENST00000562946 SULT6B1Q6IMI4 303 aa11.88□□□□□ -0.51
TMEM87A-205ENST00000562946 IFNL2Q8IZJ0 200 aa11.88□□□□□ -0.51
TMEM87A-205ENST00000562946 COL3A1P02461 1466 aaPredicted RBP11.88□□□□□ -0.51
TMEM87A-205ENST00000562946 DIAPH1O60610 1272 aaKnown RBP11.86□□□□□ -0.51
TMEM87A-205ENST00000562946 SLC15A2Q16348 729 aa11.86□□□□□ -0.51
TMEM87A-205ENST00000562946 QSER1Q2KHR3 1735 aa11.86□□□□□ -0.51
TMEM87A-205ENST00000562946 AMOTQ4VCS5 1084 aa11.86□□□□□ -0.51
TMEM87A-205ENST00000562946 PLEKHO1Q53GL0 409 aaPredicted RBP11.86□□□□□ -0.51
TMEM87A-205ENST00000562946 SLC27A3Q5K4L6 730 aa11.86□□□□□ -0.51
TMEM87A-205ENST00000562946 MPRIPQ6WCQ1 1025 aa11.86□□□□□ -0.51
TMEM87A-205ENST00000562946 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
TMEM87A-205ENST00000562946 SCN11AQ9UI33 1791 aa11.86□□□□□ -0.51
TMEM87A-205ENST00000562946 PIGBQ92521 554 aa11.86□□□□□ -0.51
TMEM87A-205ENST00000562946 PDGFDQ9GZP0 370 aaPredicted RBP11.86□□□□□ -0.51
TMEM87A-205ENST00000562946 STK32BQ9NY57 414 aa11.86□□□□□ -0.51
TMEM87A-205ENST00000562946 HMOX1P09601 288 aa11.85□□□□□ -0.51
TMEM87A-205ENST00000562946 DSG3P32926 999 aa11.85□□□□□ -0.51
TMEM87A-205ENST00000562946 KCNQ4P56696 695 aa11.85□□□□□ -0.51
TMEM87A-205ENST00000562946 C5P01031 1676 aa11.84□□□□□ -0.51
TMEM87A-205ENST00000562946 PPP2R1AP30153 589 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms