RNA–Protein interactions for RNA: ENST00000562924.5

NPTN-204, Transcript of neuroplastin, humanhuman

TSL 1 (best) BASIC

Gene NPTN, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-204ENST00000562924 ZNF827Q17R98 1081 aa19.12■□□□□ 0.65
NPTN-204ENST00000562924 DDX54Q8TDD1 881 aaKnown RBP19.12■□□□□ 0.65
NPTN-204ENST00000562924 SGIP1Q9BQI5 828 aa19.12■□□□□ 0.65
NPTN-204ENST00000562924 MTFR1LQ9H019 292 aa19.12■□□□□ 0.65
NPTN-204ENST00000562924 LRRC4BQ9NT99 713 aa19.12■□□□□ 0.65
NPTN-204ENST00000562924 MAP2P11137 1827 aaKnown RBP19.11■□□□□ 0.65
NPTN-204ENST00000562924 TAF1LQ8IZX4 1826 aa19.11■□□□□ 0.65
NPTN-204ENST00000562924 TOGARAM1Q9Y4F4 1720 aa19.11■□□□□ 0.65
NPTN-204ENST00000562924 RRS1Q15050 365 aaKnown RBP19.11■□□□□ 0.65
NPTN-204ENST00000562924 C5P01031 1676 aa19.11■□□□□ 0.65
NPTN-204ENST00000562924 YY1P25490 414 aa19.1■□□□□ 0.65
NPTN-204ENST00000562924 GGNBP2Q9H3C7 697 aa19.1■□□□□ 0.65
NPTN-204ENST00000562924 SMG6Q86US8 1419 aaKnown RBP19.08■□□□□ 0.65
NPTN-204ENST00000562924 NBPF6Q5VWK0 638 aa19.07■□□□□ 0.64
NPTN-204ENST00000562924 ZCRB1Q8TBF4 217 aaKnown RBP19.07■□□□□ 0.64
NPTN-204ENST00000562924 AKT1S1Q96B36 256 aa19.07■□□□□ 0.64
NPTN-204ENST00000562924 NBPF4Q96M43 638 aa19.07■□□□□ 0.64
NPTN-204ENST00000562924 FHDC1Q9C0D6 1143 aaPredicted RBP19.07■□□□□ 0.64
NPTN-204ENST00000562924 GOLGB1Q14789 3259 aaKnown RBP19.07■□□□□ 0.64
NPTN-204ENST00000562924 DCAF8L1A6NGE4 600 aa19.06■□□□□ 0.64
NPTN-204ENST00000562924 PRIM1P49642 420 aaKnown RBP19.06■□□□□ 0.64
NPTN-204ENST00000562924 SLC27A3Q5K4L6 730 aa19.06■□□□□ 0.64
NPTN-204ENST00000562924 INSRP06213 1382 aa19.06■□□□□ 0.64
NPTN-204ENST00000562924 FLT4P35916 1363 aa19.06■□□□□ 0.64
NPTN-204ENST00000562924 KIF24Q5T7B8 1368 aa19.06■□□□□ 0.64
NPTN-204ENST00000562924 USHBP1Q8N6Y0 703 aa19.05■□□□□ 0.64
NPTN-204ENST00000562924 SYT17Q9BSW7 474 aa19.05■□□□□ 0.64
NPTN-204ENST00000562924 NSD3Q9BZ95 1437 aa19.05■□□□□ 0.64
NPTN-204ENST00000562924 MAP3K5Q99683 1374 aa19.05■□□□□ 0.64
NPTN-204ENST00000562924 CDCA8Q53HL2 280 aa19.04■□□□□ 0.64
NPTN-204ENST00000562924 SYTL4Q96C24 671 aaPredicted RBP19.04■□□□□ 0.64
NPTN-204ENST00000562924 CGNL1Q0VF96 1302 aa19.03■□□□□ 0.64
NPTN-204ENST00000562924 CARD14Q9BXL6 1004 aa19.03■□□□□ 0.64
NPTN-204ENST00000562924 PNPLA7Q6ZV29 1317 aa19.02■□□□□ 0.64
NPTN-204ENST00000562924 NCAPD2Q15021 1401 aa19.02■□□□□ 0.64
NPTN-204ENST00000562924 KCNQ4P56696 695 aa19.02■□□□□ 0.64
NPTN-204ENST00000562924 HSP90AB2PQ58FF8 381 aa19.02■□□□□ 0.64
NPTN-204ENST00000562924 ARXQ96QS3 562 aa19.02■□□□□ 0.64
NPTN-204ENST00000562924 RAPGEF4Q8WZA2 1011 aa19■□□□□ 0.63
NPTN-204ENST00000562924 UBR3Q6ZT12 1888 aa18.99■□□□□ 0.63
NPTN-204ENST00000562924 PCDH11XQ9BZA7 1347 aa18.99■□□□□ 0.63
NPTN-204ENST00000562924 PCDH11YQ9BZA8 1340 aa18.99■□□□□ 0.63
NPTN-204ENST00000562924 C4BP0C0L5 1744 aa18.98■□□□□ 0.63
NPTN-204ENST00000562924 SLC16A10Q8TF71 515 aa18.98■□□□□ 0.63
NPTN-204ENST00000562924 TIMELESSQ9UNS1 1208 aa18.98■□□□□ 0.63
NPTN-204ENST00000562924 EMILIN1Q9Y6C2 1016 aa18.98■□□□□ 0.63
NPTN-204ENST00000562924 TATP17735 454 aaPredicted RBP18.97■□□□□ 0.63
NPTN-204ENST00000562924 CCNL1Q9UK58 526 aaPredicted RBP18.97■□□□□ 0.63
NPTN-204ENST00000562924 TFCP2L1Q9NZI6 479 aa18.96■□□□□ 0.63
NPTN-204ENST00000562924 CLSPNQ9HAW4 1339 aa18.96■□□□□ 0.63
NPTN-204ENST00000562924 CYP27B1O15528 508 aa18.94■□□□□ 0.62
NPTN-204ENST00000562924 PALLDQ8WX93 1383 aa18.93■□□□□ 0.62
NPTN-204ENST00000562924 POLD1P28340 1107 aa18.92■□□□□ 0.62
NPTN-204ENST00000562924 WASHC2AQ641Q2 1341 aa18.91■□□□□ 0.62
NPTN-204ENST00000562924 COL23A1Q86Y22 540 aaPredicted RBP18.9■□□□□ 0.62
NPTN-204ENST00000562924 PPM1GO15355 546 aaPredicted RBP18.89■□□□□ 0.61
NPTN-204ENST00000562924 MPRIPQ6WCQ1 1025 aa18.89■□□□□ 0.61
NPTN-204ENST00000562924 PIAS4Q8N2W9 510 aaPredicted RBP18.89■□□□□ 0.61
NPTN-204ENST00000562924 ZNF784Q8NCA9 323 aaPredicted RBP18.89■□□□□ 0.61
NPTN-204ENST00000562924 KLHL34Q8N239 644 aa18.88■□□□□ 0.61
NPTN-204ENST00000562924 NKX1-1Q15270 411 aaPredicted RBP18.87■□□□□ 0.61
NPTN-204ENST00000562924 ZNF831Q5JPB2 1677 aa18.87■□□□□ 0.61
NPTN-204ENST00000562924 NLGN2Q8NFZ4 835 aa18.87■□□□□ 0.61
NPTN-204ENST00000562924 EYA1Q99502 592 aa18.87■□□□□ 0.61
NPTN-204ENST00000562924 PCGF6Q9BYE7 350 aa18.87■□□□□ 0.61
NPTN-204ENST00000562924 POLKQ9UBT6 870 aa18.87■□□□□ 0.61
NPTN-204ENST00000562924 COL5A3P25940 1745 aaPredicted RBP18.86■□□□□ 0.61
NPTN-204ENST00000562924 PLEKHG2Q9H7P9 1386 aa18.84■□□□□ 0.61
NPTN-204ENST00000562924 VIRMAQ69YN4 1812 aaKnown RBP18.84■□□□□ 0.61
NPTN-204ENST00000562924 GPR162Q16538 588 aa18.84■□□□□ 0.61
NPTN-204ENST00000562924 PIGBQ92521 554 aa18.84■□□□□ 0.61
NPTN-204ENST00000562924 SPG7Q9UQ90 795 aa18.84■□□□□ 0.61
NPTN-204ENST00000562924 MSL1Q68DK7 614 aa18.83■□□□□ 0.6
NPTN-204ENST00000562924 AMIGO3Q86WK7 504 aa18.83■□□□□ 0.6
NPTN-204ENST00000562924 SMARCC1Q92922 1105 aaPredicted RBP18.83■□□□□ 0.6
NPTN-204ENST00000562924 POLR3GLQ9BT43 218 aa18.83■□□□□ 0.6
NPTN-204ENST00000562924 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.83■□□□□ 0.64e-8■■■■■ 31
NPTN-204ENST00000562924 EIF4A2Q14240 407 aaKnown RBP18.82■□□□□ 0.6
NPTN-204ENST00000562924 HSPA5P11021 654 aaKnown RBP18.81■□□□□ 0.6
NPTN-204ENST00000562924 HMGB2P26583 209 aaKnown RBP18.81■□□□□ 0.6
NPTN-204ENST00000562924 IGSF1Q8N6C5 1336 aa18.8■□□□□ 0.6
NPTN-204ENST00000562924 KIF13BQ9NQT8 1826 aa18.8■□□□□ 0.6
NPTN-204ENST00000562924 PHKG2P15735 406 aa18.8■□□□□ 0.6
NPTN-204ENST00000562924 TNNT2P45379 298 aaPredicted RBP18.8■□□□□ 0.6
NPTN-204ENST00000562924 EIF4G2P78344 907 aaKnown RBP eCLIP18.8■□□□□ 0.6
NPTN-204ENST00000562924 FLAD1Q8NFF5 587 aa18.8■□□□□ 0.6
NPTN-204ENST00000562924 C4AP0C0L4 1744 aa18.8■□□□□ 0.6
NPTN-204ENST00000562924 SCN11AQ9UI33 1791 aa18.79■□□□□ 0.6
NPTN-204ENST00000562924 PELP1Q8IZL8 1130 aaKnown RBP18.79■□□□□ 0.6
NPTN-204ENST00000562924 AK7Q96M32 723 aa18.79■□□□□ 0.6
NPTN-204ENST00000562924 KIAA1551Q9HCM1 1747 aa18.79■□□□□ 0.6
NPTN-204ENST00000562924 LOC102724428A0A0B4J2F2 783 aa18.78■□□□□ 0.6
NPTN-204ENST00000562924 YBX3P16989 372 aaKnown RBP eCLIP18.78■□□□□ 0.6
NPTN-204ENST00000562924 SIK1P57059 783 aa18.78■□□□□ 0.6
NPTN-204ENST00000562924 IFNL2Q8IZJ0 200 aa18.78■□□□□ 0.6
NPTN-204ENST00000562924 LINC00116Q8NCU8 138 aa18.78■□□□□ 0.6
NPTN-204ENST00000562924 TMOD3Q9NYL9 352 aa18.78■□□□□ 0.6
NPTN-204ENST00000562924 MYH14Q7Z406 1995 aaKnown RBP18.78■□□□□ 0.6
NPTN-204ENST00000562924 KDRP35968 1356 aa18.78■□□□□ 0.6
NPTN-204ENST00000562924 PANK3Q9H999 370 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms