RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 RAPGEF4Q8WZA2 1011 aa23.23■■□□□ 1.31
TNRC6A-209ENST00000562829 INSRP06213 1382 aa23.23■■□□□ 1.31
TNRC6A-209ENST00000562829 SLC15A2Q16348 729 aa23.22■■□□□ 1.31
TNRC6A-209ENST00000562829 CGNL1Q0VF96 1302 aa23.22■■□□□ 1.31
TNRC6A-209ENST00000562829 KIF24Q5T7B8 1368 aa23.22■■□□□ 1.31
TNRC6A-209ENST00000562829 DOT1LQ8TEK3 1739 aa23.22■■□□□ 1.31
TNRC6A-209ENST00000562829 SHANK3Q9BYB0 1731 aa23.22■■□□□ 1.31
TNRC6A-209ENST00000562829 HSPA5P11021 654 aaKnown RBP23.21■■□□□ 1.31
TNRC6A-209ENST00000562829 PDGFDQ9GZP0 370 aaPredicted RBP23.21■■□□□ 1.31
TNRC6A-209ENST00000562829 EMILIN1Q9Y6C2 1016 aa23.21■■□□□ 1.31
TNRC6A-209ENST00000562829 PPM1GO15355 546 aaPredicted RBP23.2■■□□□ 1.3
TNRC6A-209ENST00000562829 ZBTB7AO95365 584 aa23.2■■□□□ 1.3
TNRC6A-209ENST00000562829 TATP17735 454 aaPredicted RBP23.19■■□□□ 1.3
TNRC6A-209ENST00000562829 PRIM1P49642 420 aaKnown RBP23.18■■□□□ 1.3
TNRC6A-209ENST00000562829 PAPPAQ13219 1627 aa23.16■■□□□ 1.3
TNRC6A-209ENST00000562829 ATF5Q9Y2D1 282 aaPredicted RBP23.16■■□□□ 1.3
TNRC6A-209ENST00000562829 LRRC4BQ9NT99 713 aa23.14■■□□□ 1.29
TNRC6A-209ENST00000562829 MAP2P11137 1827 aaKnown RBP23.14■■□□□ 1.29
TNRC6A-209ENST00000562829 ANKRD26Q9UPS8 1709 aa23.13■■□□□ 1.29
TNRC6A-209ENST00000562829 PCDH11XQ9BZA7 1347 aa23.13■■□□□ 1.29
TNRC6A-209ENST00000562829 PCDH11YQ9BZA8 1340 aa23.13■■□□□ 1.29
TNRC6A-209ENST00000562829 TNNT2P45379 298 aaPredicted RBP23.13■■□□□ 1.29
TNRC6A-209ENST00000562829 ZNF827Q17R98 1081 aa23.12■■□□□ 1.29
TNRC6A-209ENST00000562829 SLC27A3Q5K4L6 730 aa23.12■■□□□ 1.29
TNRC6A-209ENST00000562829 MTFR1LQ9H019 292 aa23.11■■□□□ 1.29
TNRC6A-209ENST00000562829 NSD2O96028 1365 aa23.11■■□□□ 1.29
TNRC6A-209ENST00000562829 PANK3Q9H999 370 aa23.1■■□□□ 1.29
TNRC6A-209ENST00000562829 WASHC2AQ641Q2 1341 aa23.09■■□□□ 1.29
TNRC6A-209ENST00000562829 KCNQ4P56696 695 aa23.09■■□□□ 1.29
TNRC6A-209ENST00000562829 POLKQ9UBT6 870 aa23.09■■□□□ 1.29
TNRC6A-209ENST00000562829 LY75O60449 1722 aa23.08■■□□□ 1.29
TNRC6A-209ENST00000562829 DCAF8L1A6NGE4 600 aa23.08■■□□□ 1.29
TNRC6A-209ENST00000562829 PTGER2P43116 358 aa23.08■■□□□ 1.29
TNRC6A-209ENST00000562829 AKT1S1Q96B36 256 aa23.06■■□□□ 1.28
TNRC6A-209ENST00000562829 CCNL1Q9UK58 526 aaPredicted RBP23.06■■□□□ 1.28
TNRC6A-209ENST00000562829 PKD1L3Q7Z443 1732 aa23.05■■□□□ 1.28
TNRC6A-209ENST00000562829 CYP27B1O15528 508 aa23.05■■□□□ 1.28
TNRC6A-209ENST00000562829 EYA1Q99502 592 aa23.05■■□□□ 1.28
TNRC6A-209ENST00000562829 TFCP2L1Q9NZI6 479 aa23.05■■□□□ 1.28
TNRC6A-209ENST00000562829 NCAPD2Q15021 1401 aa23.05■■□□□ 1.28
TNRC6A-209ENST00000562829 MPRIPQ6WCQ1 1025 aa23.03■■□□□ 1.28
TNRC6A-209ENST00000562829 SPG7Q9UQ90 795 aa23.03■■□□□ 1.28
TNRC6A-209ENST00000562829 QSER1Q2KHR3 1735 aa23.02■■□□□ 1.28
TNRC6A-209ENST00000562829 TUBGCP6Q96RT7 1819 aa23.01■■□□□ 1.27
TNRC6A-209ENST00000562829 EIF4A2Q14240 407 aaKnown RBP23.01■■□□□ 1.27
TNRC6A-209ENST00000562829 TOGARAM1Q9Y4F4 1720 aa23.01■■□□□ 1.27
TNRC6A-209ENST00000562829 PNPLA7Q6ZV29 1317 aa23.01■■□□□ 1.27
TNRC6A-209ENST00000562829 SGIP1Q9BQI5 828 aa23■■□□□ 1.27
TNRC6A-209ENST00000562829 FHDC1Q9C0D6 1143 aaPredicted RBP23■■□□□ 1.27
TNRC6A-209ENST00000562829 PALLDQ8WX93 1383 aa23■■□□□ 1.27
TNRC6A-209ENST00000562829 ITGB4P16144 1822 aa22.99■■□□□ 1.27
TNRC6A-209ENST00000562829 MORC1Q86VD1 984 aa22.99■■□□□ 1.27
TNRC6A-209ENST00000562829 ARXQ96QS3 562 aa22.99■■□□□ 1.27
TNRC6A-209ENST00000562829 KNSTRNQ9Y448 316 aa22.99■■□□□ 1.27
TNRC6A-209ENST00000562829 SLC16A10Q8TF71 515 aa22.98■■□□□ 1.27
TNRC6A-209ENST00000562829 SYT17Q9BSW7 474 aa22.97■■□□□ 1.27
TNRC6A-209ENST00000562829 C5P01031 1676 aa22.97■■□□□ 1.27
TNRC6A-209ENST00000562829 MSH5O43196 834 aa22.96■■□□□ 1.27
TNRC6A-209ENST00000562829 POLD1P28340 1107 aa22.96■■□□□ 1.27
TNRC6A-209ENST00000562829 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.96■■□□□ 1.271e-9■■■□□ 17.8
TNRC6A-209ENST00000562829 YY1P25490 414 aa22.95■■□□□ 1.26
TNRC6A-209ENST00000562829 IFNL2Q8IZJ0 200 aa22.95■■□□□ 1.26
TNRC6A-209ENST00000562829 KLHL34Q8N239 644 aa22.95■■□□□ 1.26
TNRC6A-209ENST00000562829 SMARCC1Q92922 1105 aaPredicted RBP22.95■■□□□ 1.26
TNRC6A-209ENST00000562829 NKX1-1Q15270 411 aaPredicted RBP22.94■■□□□ 1.26
TNRC6A-209ENST00000562829 KIF7Q2M1P5 1343 aa22.93■■□□□ 1.26
TNRC6A-209ENST00000562829 IGSF1Q8N6C5 1336 aa22.93■■□□□ 1.26
TNRC6A-209ENST00000562829 PHKG2P15735 406 aa22.93■■□□□ 1.26
TNRC6A-209ENST00000562829 PIGBQ92521 554 aa22.93■■□□□ 1.26
TNRC6A-209ENST00000562829 HMGB2P26583 209 aaKnown RBP22.92■■□□□ 1.26
TNRC6A-209ENST00000562829 TMOD3Q9NYL9 352 aa22.92■■□□□ 1.26
TNRC6A-209ENST00000562829 TAF1LQ8IZX4 1826 aa22.92■■□□□ 1.26
TNRC6A-209ENST00000562829 COL23A1Q86Y22 540 aaPredicted RBP22.9■■□□□ 1.26
TNRC6A-209ENST00000562829 PLEKHG2Q9H7P9 1386 aa22.89■■□□□ 1.25
TNRC6A-209ENST00000562829 AK7Q96M32 723 aa22.88■■□□□ 1.25
TNRC6A-209ENST00000562829 C4BP0C0L5 1744 aa22.88■■□□□ 1.25
TNRC6A-209ENST00000562829 COL24A1Q17RW2 1714 aa22.88■■□□□ 1.25
TNRC6A-209ENST00000562829 MAP3K5Q99683 1374 aa22.88■■□□□ 1.25
TNRC6A-209ENST00000562829 PLEKHO1Q53GL0 409 aaPredicted RBP22.87■■□□□ 1.25
TNRC6A-209ENST00000562829 AMER1Q5JTC6 1135 aaPredicted RBP22.86■■□□□ 1.25
TNRC6A-209ENST00000562829 MSL1Q68DK7 614 aa22.86■■□□□ 1.25
TNRC6A-209ENST00000562829 LOC102724428A0A0B4J2F2 783 aa22.85■■□□□ 1.25
TNRC6A-209ENST00000562829 SIK1P57059 783 aa22.85■■□□□ 1.25
TNRC6A-209ENST00000562829 ZNF530Q6P9A1 599 aaPredicted RBP22.85■■□□□ 1.25
TNRC6A-209ENST00000562829 FLAD1Q8NFF5 587 aa22.85■■□□□ 1.25
TNRC6A-209ENST00000562829 ASAP1Q9ULH1 1129 aa22.85■■□□□ 1.25
TNRC6A-209ENST00000562829 HSP90AB1P08238 724 aaKnown RBP22.84■■□□□ 1.25
TNRC6A-209ENST00000562829 AMOTQ4VCS5 1084 aa22.84■■□□□ 1.25
TNRC6A-209ENST00000562829 AEBP1Q8IUX7 1158 aa22.84■■□□□ 1.25
TNRC6A-209ENST00000562829 PHF14O94880 888 aa22.83■■□□□ 1.25
TNRC6A-209ENST00000562829 SULT6B1Q6IMI4 303 aa22.83■■□□□ 1.25
TNRC6A-209ENST00000562829 CC2D1BQ5T0F9 858 aaKnown RBP22.82■■□□□ 1.24
TNRC6A-209ENST00000562829 ATP6V1AP38606 617 aa22.81■■□□□ 1.24
TNRC6A-209ENST00000562829 GPR162Q16538 588 aa22.81■■□□□ 1.24
TNRC6A-209ENST00000562829 C1orf141Q5JVX7 400 aa22.81■■□□□ 1.24
TNRC6A-209ENST00000562829 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
TNRC6A-209ENST00000562829 LINC00116Q8NCU8 138 aa22.81■■□□□ 1.24
TNRC6A-209ENST00000562829 DCAF5Q96JK2 942 aa22.81■■□□□ 1.24
TNRC6A-209ENST00000562829 UBR3Q6ZT12 1888 aa22.8■■□□□ 1.24
TNRC6A-209ENST00000562829 IL13P35225 146 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms