RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 C8orf34Q49A92 452 aa9.56□□□□□ -0.88
CFDP1-202ENST00000562602 ZNF428Q96B54 188 aa9.56□□□□□ -0.88
CFDP1-202ENST00000562602 KCTD12Q96CX2 325 aaKnown RBP9.56□□□□□ -0.88
CFDP1-202ENST00000562602 CAMSAP1Q5T5Y3 1602 aa9.56□□□□□ -0.88
CFDP1-202ENST00000562602 TSPOAP1O95153 1857 aa9.55□□□□□ -0.88
CFDP1-202ENST00000562602 BCAR3O75815 825 aa9.55□□□□□ -0.88
CFDP1-202ENST00000562602 HDGFL2Q7Z4V5 671 aaPredicted RBP9.55□□□□□ -0.88
CFDP1-202ENST00000562602 GLI2P10070 1586 aa9.54□□□□□ -0.88
CFDP1-202ENST00000562602 DPYSL4O14531 572 aa9.54□□□□□ -0.88
CFDP1-202ENST00000562602 EIF5BO60841 1220 aaKnown RBP9.54□□□□□ -0.88
CFDP1-202ENST00000562602 COL9A1P20849 921 aa9.54□□□□□ -0.88
CFDP1-202ENST00000562602 CALD1Q05682 793 aaKnown RBP9.54□□□□□ -0.88
CFDP1-202ENST00000562602 NEXMIFQ5QGS0 1516 aa9.54□□□□□ -0.88
CFDP1-202ENST00000562602 IPO8O15397 1037 aaKnown RBP9.53□□□□□ -0.88
CFDP1-202ENST00000562602 U2AF1L5P0DN76 240 aaPredicted RBP9.53□□□□□ -0.88
CFDP1-202ENST00000562602 U2AF1Q01081 240 aaKnown RBP eCLIP9.53□□□□□ -0.88
CFDP1-202ENST00000562602 ZKSCAN2Q63HK3 967 aa9.53□□□□□ -0.88
CFDP1-202ENST00000562602 SPRYD3Q8NCJ5 442 aa9.53□□□□□ -0.88
CFDP1-202ENST00000562602 PHF14O94880 888 aa9.52□□□□□ -0.89
CFDP1-202ENST00000562602 RGS3P49796 1198 aa9.52□□□□□ -0.89
CFDP1-202ENST00000562602 IDI1Q13907 227 aa9.52□□□□□ -0.89
CFDP1-202ENST00000562602 TMEM132EQ6IEE7 984 aa9.52□□□□□ -0.89
CFDP1-202ENST00000562602 PLA2G2EQ9NZK7 142 aa9.52□□□□□ -0.89
CFDP1-202ENST00000562602 DIP2CQ9Y2E4 1556 aa9.51□□□□□ -0.89
CFDP1-202ENST00000562602 SRPK2P78362 688 aaKnown RBP9.51□□□□□ -0.89
CFDP1-202ENST00000562602 MVPQ14764 893 aaKnown RBP9.51□□□□□ -0.89
CFDP1-202ENST00000562602 FTSJ3Q8IY81 847 aaKnown RBP9.51□□□□□ -0.89
CFDP1-202ENST00000562602 FRAT1Q92837 279 aaPredicted RBP9.51□□□□□ -0.89
CFDP1-202ENST00000562602 POGKQ9P215 609 aa9.51□□□□□ -0.89
CFDP1-202ENST00000562602 DDX19BQ9UMR2 479 aa9.51□□□□□ -0.89
CFDP1-202ENST00000562602 COG6Q9Y2V7 657 aa9.51□□□□□ -0.89
CFDP1-202ENST00000562602 SHPRHQ149N8 1683 aa9.51□□□□□ -0.89
CFDP1-202ENST00000562602 TULP4Q9NRJ4 1543 aa9.51□□□□□ -0.89
CFDP1-202ENST00000562602 FCHSD2O94868 740 aa9.5□□□□□ -0.89
CFDP1-202ENST00000562602 IGHDP01880 384 aa9.5□□□□□ -0.89
CFDP1-202ENST00000562602 HDGFP51858 240 aaKnown RBP9.5□□□□□ -0.89
CFDP1-202ENST00000562602 ALDH1L2Q3SY69 923 aa9.5□□□□□ -0.89
CFDP1-202ENST00000562602 TYW1BQ6NUM6 668 aa9.5□□□□□ -0.89
CFDP1-202ENST00000562602 DZIP1LQ8IYY4 767 aaKnown RBP9.5□□□□□ -0.89
CFDP1-202ENST00000562602 KIF16BQ96L93 1317 aa9.5□□□□□ -0.89
CFDP1-202ENST00000562602 ADGRB2O60241 1585 aa9.5□□□□□ -0.89
CFDP1-202ENST00000562602 PNPLA6Q8IY17 1366 aa9.5□□□□□ -0.89
CFDP1-202ENST00000562602 YTHDC2Q9H6S0 1430 aaKnown RBP9.49□□□□□ -0.89
CFDP1-202ENST00000562602 ARHGEF28Q8N1W1 1705 aaKnown RBP9.49□□□□□ -0.89
CFDP1-202ENST00000562602 PPP1R3GB7ZBB8 358 aa9.49□□□□□ -0.89
CFDP1-202ENST00000562602 DIAPH1O60610 1272 aaKnown RBP9.49□□□□□ -0.89
CFDP1-202ENST00000562602 TNNT2P45379 298 aaPredicted RBP9.49□□□□□ -0.89
CFDP1-202ENST00000562602 BRPF1P55201 1214 aaPredicted RBP9.49□□□□□ -0.89
CFDP1-202ENST00000562602 HDAC1Q13547 482 aaPredicted RBP9.49□□□□□ -0.89
CFDP1-202ENST00000562602 PROX2Q3B8N5 592 aa9.49□□□□□ -0.89
CFDP1-202ENST00000562602 SKAP1Q86WV1 359 aa9.49□□□□□ -0.89
CFDP1-202ENST00000562602 PANK1Q8TE04 598 aa9.49□□□□□ -0.89
CFDP1-202ENST00000562602 LAS1LQ9Y4W2 734 aaKnown RBP9.49□□□□□ -0.89
CFDP1-202ENST00000562602 DLC1Q96QB1 1528 aa9.49□□□□□ -0.89
CFDP1-202ENST00000562602 A0A1W2PP64 1363 aa9.49□□□□□ -0.89
CFDP1-202ENST00000562602 RAPGEF3O95398 923 aa9.48□□□□□ -0.89
CFDP1-202ENST00000562602 TMPOP42166 694 aaKnown RBP9.48□□□□□ -0.89
CFDP1-202ENST00000562602 NFKBIBQ15653 356 aa9.48□□□□□ -0.89
CFDP1-202ENST00000562602 NEUROD2Q15784 382 aa9.48□□□□□ -0.89
CFDP1-202ENST00000562602 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.48□□□□□ -0.89
CFDP1-202ENST00000562602 FBXW7Q969H0 707 aa9.48□□□□□ -0.89
CFDP1-202ENST00000562602 SIRT1Q96EB6 747 aa9.48□□□□□ -0.89
CFDP1-202ENST00000562602 CFAP44Q96MT7 982 aa9.48□□□□□ -0.89
CFDP1-202ENST00000562602 PLEKHF1Q96S99 279 aa9.48□□□□□ -0.89
CFDP1-202ENST00000562602 REREQ9P2R6 1566 aa9.48□□□□□ -0.89
CFDP1-202ENST00000562602 HAP1P54257 671 aaPredicted RBP9.47□□□□□ -0.89
CFDP1-202ENST00000562602 PTPN5P54829 565 aa9.47□□□□□ -0.89
CFDP1-202ENST00000562602 LMOD3Q0VAK6 560 aa9.47□□□□□ -0.89
CFDP1-202ENST00000562602 THSD4Q6ZMP0 1018 aa9.47□□□□□ -0.89
CFDP1-202ENST00000562602 CLTCQ00610 1675 aaKnown RBP9.47□□□□□ -0.89
CFDP1-202ENST00000562602 PTPRMP28827 1452 aa9.47□□□□□ -0.89
CFDP1-202ENST00000562602 ATP7BP35670 1465 aa9.47□□□□□ -0.89
CFDP1-202ENST00000562602 AGLP35573 1532 aa9.46□□□□□ -0.89
CFDP1-202ENST00000562602 U2SURPO15042 1029 aaKnown RBP9.46□□□□□ -0.9
CFDP1-202ENST00000562602 FYB1O15117 783 aa9.46□□□□□ -0.9
CFDP1-202ENST00000562602 C6orf132Q5T0Z8 1188 aa9.46□□□□□ -0.9
CFDP1-202ENST00000562602 ATF7IPQ6VMQ6 1270 aa9.46□□□□□ -0.9
CFDP1-202ENST00000562602 ARHGAP45Q92619 1136 aa9.46□□□□□ -0.9
CFDP1-202ENST00000562602 SMC4Q9NTJ3 1288 aa9.46□□□□□ -0.9
CFDP1-202ENST00000562602 RRP7AQ9Y3A4 280 aaKnown RBP9.46□□□□□ -0.9
CFDP1-202ENST00000562602 TMEM131LA2VDJ0 1609 aa9.45□□□□□ -0.9
CFDP1-202ENST00000562602 RICTORQ6R327 1708 aa9.45□□□□□ -0.9
CFDP1-202ENST00000562602 PAXIP1Q6ZW49 1069 aaPredicted RBP9.45□□□□□ -0.9
CFDP1-202ENST00000562602 MRPL50Q8N5N7 158 aaKnown RBP9.45□□□□□ -0.9
CFDP1-202ENST00000562602 PRAM1Q96QH2 718 aa9.45□□□□□ -0.9
CFDP1-202ENST00000562602 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.45□□□□□ -0.9
CFDP1-202ENST00000562602 RABGEF1Q9UJ41 708 aa9.45□□□□□ -0.9
CFDP1-202ENST00000562602 PDZRN3Q9UPQ7 1066 aa9.45□□□□□ -0.9
CFDP1-202ENST00000562602 PPIP5K1Q6PFW1 1433 aa9.45□□□□□ -0.9
CFDP1-202ENST00000562602 COL3A1P02461 1466 aaPredicted RBP9.45□□□□□ -0.9
CFDP1-202ENST00000562602 RIPK4P57078 832 aa9.44□□□□□ -0.9
CFDP1-202ENST00000562602 DDX12PQ92771 950 aa9.44□□□□□ -0.9
CFDP1-202ENST00000562602 TBC1D32Q96NH3 1257 aa9.44□□□□□ -0.9
CFDP1-202ENST00000562602 EPAS1Q99814 870 aa9.44□□□□□ -0.9
CFDP1-202ENST00000562602 CDK19Q9BWU1 502 aa9.44□□□□□ -0.9
CFDP1-202ENST00000562602 STK26Q9P289 416 aa9.44□□□□□ -0.9
CFDP1-202ENST00000562602 PCDHB15Q9Y5E8 787 aa9.44□□□□□ -0.9
CFDP1-202ENST00000562602 CDC42BPGQ6DT37 1551 aa9.44□□□□□ -0.9
CFDP1-202ENST00000562602 PREX1Q8TCU6 1659 aa9.44□□□□□ -0.9
CFDP1-202ENST00000562602 SIGLEC1Q9BZZ2 1709 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms