RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 NCAPD2Q15021 1401 aa15.17■□□□□ 0.02
TSC2-218ENST00000562474 PARD3Q8TEW0 1356 aa15.17■□□□□ 0.02
TSC2-218ENST00000562474 TRIM37O94972 964 aa15.17■□□□□ 0.02
TSC2-218ENST00000562474 DEFB132Q7Z7B7 95 aa15.17■□□□□ 0.02
TSC2-218ENST00000562474 RAPGEF4Q8WZA2 1011 aa15.17■□□□□ 0.02
TSC2-218ENST00000562474 ACSBG1Q96GR2 724 aa15.17■□□□□ 0.02
TSC2-218ENST00000562474 NHSQ6T4R5 1651 aa15.16■□□□□ 0.02
TSC2-218ENST00000562474 HMOX1P09601 288 aa15.16■□□□□ 0.02
TSC2-218ENST00000562474 TATP17735 454 aaPredicted RBP15.16■□□□□ 0.02
TSC2-218ENST00000562474 IL13P35225 146 aa15.16■□□□□ 0.02
TSC2-218ENST00000562474 CDCA7Q9BWT1 371 aaPredicted RBP15.16■□□□□ 0.02
TSC2-218ENST00000562474 IGSF1Q8N6C5 1336 aa15.16■□□□□ 0.02
TSC2-218ENST00000562474 U2SURPO15042 1029 aaKnown RBP15.14■□□□□ 0.01
TSC2-218ENST00000562474 SULT6B1Q6IMI4 303 aa15.14■□□□□ 0.01
TSC2-218ENST00000562474 FAM196AQ6ZSG2 479 aa15.14■□□□□ 0.01
TSC2-218ENST00000562474 DIAPH1O60610 1272 aaKnown RBP15.13■□□□□ 0.01
TSC2-218ENST00000562474 ZCRB1Q8TBF4 217 aaKnown RBP15.13■□□□□ 0.01
TSC2-218ENST00000562474 KCNQ2O43526 872 aa15.12■□□□□ 0.01
TSC2-218ENST00000562474 DLG5Q8TDM6 1919 aa15.11■□□□□ 0.01
TSC2-218ENST00000562474 NUP188Q5SRE5 1749 aa15.1■□□□□ 0.01
TSC2-218ENST00000562474 CYP27B1O15528 508 aa15.1■□□□□ 0.01
TSC2-218ENST00000562474 EN1Q05925 392 aaPredicted RBP15.1■□□□□ 0.01
TSC2-218ENST00000562474 SF3B2Q13435 895 aaKnown RBP15.1■□□□□ 0.01
TSC2-218ENST00000562474 SCN11AQ9UI33 1791 aa15.1■□□□□ 0.01
TSC2-218ENST00000562474 RREB1Q92766 1687 aa15.09■□□□□ 0.01
TSC2-218ENST00000562474 CFAP53Q96M91 514 aa15.09■□□□□ 0.01
TSC2-218ENST00000562474 APBA3O96018 575 aa15.08■□□□□ 0
TSC2-218ENST00000562474 SYTL4Q96C24 671 aaPredicted RBP15.08■□□□□ 0
TSC2-218ENST00000562474 PCDH11XQ9BZA7 1347 aa15.08■□□□□ 0
TSC2-218ENST00000562474 PCDH11YQ9BZA8 1340 aa15.08■□□□□ 0
TSC2-218ENST00000562474 RALBP1Q15311 655 aa15.07■□□□□ 0
TSC2-218ENST00000562474 EZH2Q15910 746 aaKnown RBP15.07■□□□□ 0
TSC2-218ENST00000562474 PRKRIP1Q9H875 184 aaPredicted RBP15.07■□□□□ 0
TSC2-218ENST00000562474 KDRP35968 1356 aa15.07■□□□□ 0
TSC2-218ENST00000562474 ZNF530Q6P9A1 599 aaPredicted RBP15.06■□□□□ 0
TSC2-218ENST00000562474 MYBBP1AQ9BQG0 1328 aaKnown RBP15.06■□□□□ 0
TSC2-218ENST00000562474 U2AF1L5P0DN76 240 aaPredicted RBP15.05■□□□□ -0
TSC2-218ENST00000562474 BAG6P46379 1132 aa15.05■□□□□ -0
TSC2-218ENST00000562474 U2AF1Q01081 240 aaKnown RBP eCLIP15.05■□□□□ -0
TSC2-218ENST00000562474 SPG7Q9UQ90 795 aa15.05■□□□□ -0
TSC2-218ENST00000562474 RGPD3A6NKT7 1758 aaPredicted RBP15.05■□□□□ -0
TSC2-218ENST00000562474 RGPD4Q7Z3J3 1758 aa15.05■□□□□ -0
TSC2-218ENST00000562474 LY75O60449 1722 aa15.04■□□□□ -0
TSC2-218ENST00000562474 PRIM1P49642 420 aaKnown RBP15.04■□□□□ -0
TSC2-218ENST00000562474 BCL9O00512 1426 aa15.03■□□□□ -0
TSC2-218ENST00000562474 PHKG2P15735 406 aa15.03■□□□□ -0
TSC2-218ENST00000562474 PRKAR2BP31323 418 aa15.03■□□□□ -0
TSC2-218ENST00000562474 CCDC184Q52MB2 194 aa15.03■□□□□ -0
TSC2-218ENST00000562474 PLEKHO1Q53GL0 409 aaPredicted RBP15.03■□□□□ -0
TSC2-218ENST00000562474 CCDC125Q86Z20 511 aa15.03■□□□□ -0
TSC2-218ENST00000562474 KDM6AO15550 1401 aaPredicted RBP15.02■□□□□ -0
TSC2-218ENST00000562474 TUBGCP6Q96RT7 1819 aa15.02■□□□□ -0
TSC2-218ENST00000562474 PHACTR3Q96KR7 559 aa15.02■□□□□ -0
TSC2-218ENST00000562474 BCL11BQ9C0K0 894 aaPredicted RBP15.02■□□□□ -0
TSC2-218ENST00000562474 TAF1LQ8IZX4 1826 aa15.01□□□□□ -0.01
TSC2-218ENST00000562474 KCNQ4P56696 695 aa15.01□□□□□ -0.01
TSC2-218ENST00000562474 MTHFSDQ2M296 383 aaKnown RBP15.01□□□□□ -0.01
TSC2-218ENST00000562474 MPRIPQ6WCQ1 1025 aa15.01□□□□□ -0.01
TSC2-218ENST00000562474 IFNL2Q8IZJ0 200 aa15.01□□□□□ -0.01
TSC2-218ENST00000562474 RSPH6AQ9H0K4 717 aa15.01□□□□□ -0.01
TSC2-218ENST00000562474 NUDCQ9Y266 331 aa15.01□□□□□ -0.01
TSC2-218ENST00000562474 CAMKK2Q96RR4 588 aa15□□□□□ -0.01
TSC2-218ENST00000562474 SIPA1L3O60292 1781 aaPredicted RBP14.99□□□□□ -0.01
TSC2-218ENST00000562474 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.99□□□□□ -0.01
TSC2-218ENST00000562474 SENP3-EIF4A1A0A087X0R7 540 aa14.98□□□□□ -0.01
TSC2-218ENST00000562474 PSDA5PKW4 1024 aaPredicted RBP14.98□□□□□ -0.01
TSC2-218ENST00000562474 AMOTQ4VCS5 1084 aa14.98□□□□□ -0.01
TSC2-218ENST00000562474 C1orf141Q5JVX7 400 aa14.98□□□□□ -0.01
TSC2-218ENST00000562474 C5P01031 1676 aa14.97□□□□□ -0.01
TSC2-218ENST00000562474 ADAMTS7Q9UKP4 1686 aa14.97□□□□□ -0.01
TSC2-218ENST00000562474 ANP32CO43423 234 aa14.97□□□□□ -0.01
TSC2-218ENST00000562474 CCDC146Q8IYE0 955 aa14.97□□□□□ -0.01
TSC2-218ENST00000562474 PROM2Q8N271 834 aa14.97□□□□□ -0.01
TSC2-218ENST00000562474 LGR6Q9HBX8 967 aa14.97□□□□□ -0.01
TSC2-218ENST00000562474 NKX1-1Q15270 411 aaPredicted RBP14.96□□□□□ -0.01
TSC2-218ENST00000562474 PIGBQ92521 554 aa14.96□□□□□ -0.01
TSC2-218ENST00000562474 TXNRD1Q16881 649 aa14.95□□□□□ -0.02
TSC2-218ENST00000562474 ANO8Q9HCE9 1232 aaPredicted RBP14.95□□□□□ -0.02
TSC2-218ENST00000562474 PAPPAQ13219 1627 aa14.95□□□□□ -0.02
TSC2-218ENST00000562474 TMOD3Q9NYL9 352 aa14.94□□□□□ -0.02
TSC2-218ENST00000562474 ASAP1Q9ULH1 1129 aa14.94□□□□□ -0.02
TSC2-218ENST00000562474 MAP3K5Q99683 1374 aa14.94□□□□□ -0.02
TSC2-218ENST00000562474 RNMTO43148 476 aaKnown RBP14.93□□□□□ -0.02
TSC2-218ENST00000562474 DCTN1Q14203 1278 aa14.93□□□□□ -0.02
TSC2-218ENST00000562474 AKAP4Q5JQC9 854 aa14.93□□□□□ -0.02
TSC2-218ENST00000562474 DCAF5Q96JK2 942 aa14.93□□□□□ -0.02
TSC2-218ENST00000562474 LRRC4BQ9NT99 713 aa14.93□□□□□ -0.02
TSC2-218ENST00000562474 PALLDQ8WX93 1383 aa14.93□□□□□ -0.02
TSC2-218ENST00000562474 PLSCR1O15162 318 aa14.92□□□□□ -0.02
TSC2-218ENST00000562474 FCHSD2O94868 740 aa14.92□□□□□ -0.02
TSC2-218ENST00000562474 CABP4P57796 275 aa14.92□□□□□ -0.02
TSC2-218ENST00000562474 R3HDM1Q15032 1099 aaKnown RBP14.92□□□□□ -0.02
TSC2-218ENST00000562474 WDR43Q15061 677 aaKnown RBP eCLIP14.92□□□□□ -0.02
TSC2-218ENST00000562474 RRP7AQ9Y3A4 280 aaKnown RBP14.92□□□□□ -0.02
TSC2-218ENST00000562474 PLEKHG2Q9H7P9 1386 aa14.92□□□□□ -0.02
TSC2-218ENST00000562474 TJP1Q07157 1748 aa14.92□□□□□ -0.02
TSC2-218ENST00000562474 MYH14Q7Z406 1995 aaKnown RBP14.91□□□□□ -0.02
TSC2-218ENST00000562474 UBR2Q8IWV8 1755 aa14.91□□□□□ -0.02
TSC2-218ENST00000562474 MRC1P22897 1456 aa14.91□□□□□ -0.02
TSC2-218ENST00000562474 HSP90AB1P08238 724 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 456.5 ms