RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 KIF7Q2M1P5 1343 aa24.39■■□□□ 1.5
CMTM3-204ENST00000562357 POLKQ9UBT6 870 aa24.39■■□□□ 1.49
CMTM3-204ENST00000562357 ANKRD26Q9UPS8 1709 aa24.38■■□□□ 1.49
CMTM3-204ENST00000562357 TXNRD1Q16881 649 aa24.38■■□□□ 1.49
CMTM3-204ENST00000562357 MORC1Q86VD1 984 aa24.38■■□□□ 1.49
CMTM3-204ENST00000562357 RGPD2P0DJD1 1756 aa24.38■■□□□ 1.49
CMTM3-204ENST00000562357 SYTL4Q96C24 671 aaPredicted RBP24.37■■□□□ 1.49
CMTM3-204ENST00000562357 LRP5O75197 1615 aa24.36■■□□□ 1.49
CMTM3-204ENST00000562357 SRCAPQ6ZRS2 3230 aa24.35■■□□□ 1.49
CMTM3-204ENST00000562357 PCDH11XQ9BZA7 1347 aa24.35■■□□□ 1.49
CMTM3-204ENST00000562357 PCDH11YQ9BZA8 1340 aa24.35■■□□□ 1.49
CMTM3-204ENST00000562357 STK32BQ9NY57 414 aa24.33■■□□□ 1.49
CMTM3-204ENST00000562357 MAP2P11137 1827 aaKnown RBP24.33■■□□□ 1.48
CMTM3-204ENST00000562357 PROM2Q8N271 834 aa24.32■■□□□ 1.48
CMTM3-204ENST00000562357 KAT6BQ8WYB5 2073 aa24.31■■□□□ 1.48
CMTM3-204ENST00000562357 PRIM1P49642 420 aaKnown RBP24.31■■□□□ 1.48
CMTM3-204ENST00000562357 EYA1Q99502 592 aa24.3■■□□□ 1.48
CMTM3-204ENST00000562357 SPG7Q9UQ90 795 aa24.3■■□□□ 1.48
CMTM3-204ENST00000562357 EIF4A2Q14240 407 aaKnown RBP24.29■■□□□ 1.48
CMTM3-204ENST00000562357 ANO8Q9HCE9 1232 aaPredicted RBP24.29■■□□□ 1.48
CMTM3-204ENST00000562357 BTAF1O14981 1849 aa24.28■■□□□ 1.48
CMTM3-204ENST00000562357 NCAPD2Q15021 1401 aa24.28■■□□□ 1.48
CMTM3-204ENST00000562357 DOT1LQ8TEK3 1739 aa24.27■■□□□ 1.48
CMTM3-204ENST00000562357 SHANK3Q9BYB0 1731 aa24.27■■□□□ 1.48
CMTM3-204ENST00000562357 AMER1Q5JTC6 1135 aaPredicted RBP24.26■■□□□ 1.47
CMTM3-204ENST00000562357 SLC27A3Q5K4L6 730 aa24.26■■□□□ 1.47
CMTM3-204ENST00000562357 SLC15A2Q16348 729 aa24.25■■□□□ 1.47
CMTM3-204ENST00000562357 SPON1Q9HCB6 807 aa24.25■■□□□ 1.47
CMTM3-204ENST00000562357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.24■■□□□ 1.47
CMTM3-204ENST00000562357 CYP27B1O15528 508 aa24.22■■□□□ 1.47
CMTM3-204ENST00000562357 PPP1R1BQ9UD71 204 aaPredicted RBP24.22■■□□□ 1.47
CMTM3-204ENST00000562357 PLEKHG2Q9H7P9 1386 aa24.21■■□□□ 1.47
CMTM3-204ENST00000562357 IGSF1Q8N6C5 1336 aa24.21■■□□□ 1.47
CMTM3-204ENST00000562357 CC2D1BQ5T0F9 858 aaKnown RBP24.21■■□□□ 1.47
CMTM3-204ENST00000562357 PKD1L3Q7Z443 1732 aa24.2■■□□□ 1.46
CMTM3-204ENST00000562357 HMGB2P26583 209 aaKnown RBP24.19■■□□□ 1.46
CMTM3-204ENST00000562357 PER1O15534 1290 aaPredicted RBP24.18■■□□□ 1.46
CMTM3-204ENST00000562357 MPRIPQ6WCQ1 1025 aa24.18■■□□□ 1.46
CMTM3-204ENST00000562357 IFNL2Q8IZJ0 200 aa24.18■■□□□ 1.46
CMTM3-204ENST00000562357 LRRC4BQ9NT99 713 aa24.18■■□□□ 1.46
CMTM3-204ENST00000562357 CCNL1Q9UK58 526 aaPredicted RBP24.18■■□□□ 1.46
CMTM3-204ENST00000562357 NKX1-1Q15270 411 aaPredicted RBP24.16■■□□□ 1.46
CMTM3-204ENST00000562357 NPC1L1Q9UHC9 1359 aa24.16■■□□□ 1.46
CMTM3-204ENST00000562357 ZBTB7AO95365 584 aa24.15■■□□□ 1.46
CMTM3-204ENST00000562357 PLEKHO1Q53GL0 409 aaPredicted RBP24.15■■□□□ 1.46
CMTM3-204ENST00000562357 PAPPAQ13219 1627 aa24.14■■□□□ 1.46
CMTM3-204ENST00000562357 PHKG2P15735 406 aa24.14■■□□□ 1.45
CMTM3-204ENST00000562357 MTHFSP49914 203 aa24.14■■□□□ 1.45
CMTM3-204ENST00000562357 CNGB1Q14028 1251 aaPredicted RBP24.14■■□□□ 1.45
CMTM3-204ENST00000562357 AMOTQ4VCS5 1084 aa24.14■■□□□ 1.45
CMTM3-204ENST00000562357 SMARCC1Q92922 1105 aaPredicted RBP24.14■■□□□ 1.45
CMTM3-204ENST00000562357 HSP90AB1P08238 724 aaKnown RBP24.13■■□□□ 1.45
CMTM3-204ENST00000562357 ZNF827Q17R98 1081 aa24.13■■□□□ 1.45
CMTM3-204ENST00000562357 TMOD3Q9NYL9 352 aa24.13■■□□□ 1.45
CMTM3-204ENST00000562357 CASZ1Q86V15 1759 aa24.13■■□□□ 1.45
CMTM3-204ENST00000562357 PALLDQ8WX93 1383 aa24.13■■□□□ 1.45
CMTM3-204ENST00000562357 PDGFDQ9GZP0 370 aaPredicted RBP24.12■■□□□ 1.45
CMTM3-204ENST00000562357 MTFR1LQ9H019 292 aa24.12■■□□□ 1.45
CMTM3-204ENST00000562357 TFCP2L1Q9NZI6 479 aa24.12■■□□□ 1.45
CMTM3-204ENST00000562357 IL13P35225 146 aa24.11■■□□□ 1.45
CMTM3-204ENST00000562357 KCNQ4P56696 695 aa24.11■■□□□ 1.45
CMTM3-204ENST00000562357 SULT6B1Q6IMI4 303 aa24.11■■□□□ 1.45
CMTM3-204ENST00000562357 AKT1S1Q96B36 256 aa24.11■■□□□ 1.45
CMTM3-204ENST00000562357 LY75O60449 1722 aa24.1■■□□□ 1.45
CMTM3-204ENST00000562357 C1orf141Q5JVX7 400 aa24.09■■□□□ 1.45
CMTM3-204ENST00000562357 ZNF530Q6P9A1 599 aaPredicted RBP24.09■■□□□ 1.45
CMTM3-204ENST00000562357 AEBP1Q8IUX7 1158 aa24.09■■□□□ 1.45
CMTM3-204ENST00000562357 ATF5Q9Y2D1 282 aaPredicted RBP24.09■■□□□ 1.45
CMTM3-204ENST00000562357 PIGBQ92521 554 aa24.08■■□□□ 1.45
CMTM3-204ENST00000562357 TOGARAM1Q9Y4F4 1720 aa24.07■■□□□ 1.44
CMTM3-204ENST00000562357 DIAPH1O60610 1272 aaKnown RBP24.07■■□□□ 1.44
CMTM3-204ENST00000562357 DCAF5Q96JK2 942 aa24.07■■□□□ 1.44
CMTM3-204ENST00000562357 KDRP35968 1356 aa24.06■■□□□ 1.44
CMTM3-204ENST00000562357 SLC16A10Q8TF71 515 aa24.05■■□□□ 1.44
CMTM3-204ENST00000562357 DCAF8L1A6NGE4 600 aa24.03■■□□□ 1.44
CMTM3-204ENST00000562357 ERVV-2B6SEH9 535 aa24.03■■□□□ 1.44
CMTM3-204ENST00000562357 PNPLA7Q6ZV29 1317 aa24.03■■□□□ 1.44
CMTM3-204ENST00000562357 ITGB4P16144 1822 aa24.03■■□□□ 1.44
CMTM3-204ENST00000562357 MSH5O43196 834 aa24.02■■□□□ 1.44
CMTM3-204ENST00000562357 PTGER2P43116 358 aa24.02■■□□□ 1.44
CMTM3-204ENST00000562357 CFAP53Q96M91 514 aa24.02■■□□□ 1.44
CMTM3-204ENST00000562357 CABP4P57796 275 aa24.01■■□□□ 1.43
CMTM3-204ENST00000562357 LOC102724428A0A0B4J2F2 783 aa24■■□□□ 1.43
CMTM3-204ENST00000562357 HMOX1P09601 288 aa24■■□□□ 1.43
CMTM3-204ENST00000562357 POLD1P28340 1107 aa24■■□□□ 1.43
CMTM3-204ENST00000562357 SIK1P57059 783 aa24■■□□□ 1.43
CMTM3-204ENST00000562357 AK7Q96M32 723 aa24■■□□□ 1.43
CMTM3-204ENST00000562357 QSER1Q2KHR3 1735 aa23.99■■□□□ 1.43
CMTM3-204ENST00000562357 FLAD1Q8NFF5 587 aa23.99■■□□□ 1.43
CMTM3-204ENST00000562357 ASAP1Q9ULH1 1129 aa23.99■■□□□ 1.43
CMTM3-204ENST00000562357 C5P01031 1676 aa23.99■■□□□ 1.43
CMTM3-204ENST00000562357 U2SURPO15042 1029 aaKnown RBP23.98■■□□□ 1.43
CMTM3-204ENST00000562357 ARXQ96QS3 562 aa23.97■■□□□ 1.43
CMTM3-204ENST00000562357 KDM6AO15550 1401 aaPredicted RBP23.96■■□□□ 1.43
CMTM3-204ENST00000562357 ATP6V1AP38606 617 aa23.96■■□□□ 1.43
CMTM3-204ENST00000562357 AKAP4Q5JQC9 854 aa23.96■■□□□ 1.43
CMTM3-204ENST00000562357 ATG3Q9NT62 314 aa23.96■■□□□ 1.43
CMTM3-204ENST00000562357 SGIP1Q9BQI5 828 aa23.95■■□□□ 1.42
CMTM3-204ENST00000562357 COL23A1Q86Y22 540 aaPredicted RBP23.93■■□□□ 1.42
CMTM3-204ENST00000562357 RBM42Q9BTD8 480 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms