RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ADAMTS7Q9UKP4 1686 aa18.12■□□□□ 0.49
CDH1-204ENST00000562118 TOGARAM1Q9Y4F4 1720 aa18.12■□□□□ 0.49
CDH1-204ENST00000562118 DOT1LQ8TEK3 1739 aa18.11■□□□□ 0.49
CDH1-204ENST00000562118 EXOC5O00471 708 aa18.1■□□□□ 0.49
CDH1-204ENST00000562118 UPF1Q92900 1129 aaKnown RBP eCLIP18.1■□□□□ 0.49
CDH1-204ENST00000562118 PDE3BQ13370 1112 aa18.09■□□□□ 0.49
CDH1-204ENST00000562118 FAM196AQ6ZSG2 479 aa18.09■□□□□ 0.49
CDH1-204ENST00000562118 RAPGEF4Q8WZA2 1011 aa18.09■□□□□ 0.49
CDH1-204ENST00000562118 A0A0G2JS52 829 aa18.08■□□□□ 0.48
CDH1-204ENST00000562118 TATP17735 454 aaPredicted RBP18.08■□□□□ 0.48
CDH1-204ENST00000562118 MYT1Q01538 1121 aa18.08■□□□□ 0.48
CDH1-204ENST00000562118 AEBP1Q8IUX7 1158 aa18.08■□□□□ 0.48
CDH1-204ENST00000562118 ZCRB1Q8TBF4 217 aaKnown RBP18.08■□□□□ 0.48
CDH1-204ENST00000562118 CFAP53Q96M91 514 aa18.08■□□□□ 0.48
CDH1-204ENST00000562118 VIRMAQ69YN4 1812 aaKnown RBP18.07■□□□□ 0.48
CDH1-204ENST00000562118 CNGB1Q14028 1251 aaPredicted RBP18.07■□□□□ 0.48
CDH1-204ENST00000562118 PCDH11XQ9BZA7 1347 aa18.06■□□□□ 0.48
CDH1-204ENST00000562118 PCDH11YQ9BZA8 1340 aa18.06■□□□□ 0.48
CDH1-204ENST00000562118 CCDC125Q86Z20 511 aa18.06■□□□□ 0.48
CDH1-204ENST00000562118 ITGB4P16144 1822 aa18.06■□□□□ 0.48
CDH1-204ENST00000562118 RREB1Q92766 1687 aa18.06■□□□□ 0.48
CDH1-204ENST00000562118 SCN11AQ9UI33 1791 aa18.05■□□□□ 0.48
CDH1-204ENST00000562118 NKX1-1Q15270 411 aaPredicted RBP18.05■□□□□ 0.48
CDH1-204ENST00000562118 SULT6B1Q6IMI4 303 aa18.05■□□□□ 0.48
CDH1-204ENST00000562118 BTAF1O14981 1849 aa18.05■□□□□ 0.48
CDH1-204ENST00000562118 CYP27B1O15528 508 aa18.04■□□□□ 0.48
CDH1-204ENST00000562118 FAM182BQ5T319 152 aa18.04■□□□□ 0.48
CDH1-204ENST00000562118 RSPH6AQ9H0K4 717 aa18.03■□□□□ 0.48
CDH1-204ENST00000562118 AMOTQ4VCS5 1084 aa18.02■□□□□ 0.48
CDH1-204ENST00000562118 SPG7Q9UQ90 795 aa18.01■□□□□ 0.47
CDH1-204ENST00000562118 NUDCQ9Y266 331 aa18.01■□□□□ 0.47
CDH1-204ENST00000562118 MRC1P22897 1456 aa18.01■□□□□ 0.47
CDH1-204ENST00000562118 LY75O60449 1722 aa18.01■□□□□ 0.47
CDH1-204ENST00000562118 PHKG2P15735 406 aa18■□□□□ 0.47
CDH1-204ENST00000562118 SIPA1L3O60292 1781 aaPredicted RBP17.99■□□□□ 0.47
CDH1-204ENST00000562118 KDM6AO15550 1401 aaPredicted RBP17.99■□□□□ 0.47
CDH1-204ENST00000562118 FCHSD2O94868 740 aa17.99■□□□□ 0.47
CDH1-204ENST00000562118 HMOX1P09601 288 aa17.99■□□□□ 0.47
CDH1-204ENST00000562118 BCL11BQ9C0K0 894 aaPredicted RBP17.99■□□□□ 0.47
CDH1-204ENST00000562118 DLG5Q8TDM6 1919 aa17.98■□□□□ 0.47
CDH1-204ENST00000562118 PLEKHO1Q53GL0 409 aaPredicted RBP17.98■□□□□ 0.47
CDH1-204ENST00000562118 NUP188Q5SRE5 1749 aa17.98■□□□□ 0.47
CDH1-204ENST00000562118 IFNL2Q8IZJ0 200 aa17.97■□□□□ 0.47
CDH1-204ENST00000562118 DDX54Q8TDD1 881 aaKnown RBP17.97■□□□□ 0.47
CDH1-204ENST00000562118 PLEKHF1Q96S99 279 aa17.97■□□□□ 0.47
CDH1-204ENST00000562118 PAPPAQ13219 1627 aa17.97■□□□□ 0.47
CDH1-204ENST00000562118 U2SURPO15042 1029 aaKnown RBP17.96■□□□□ 0.47
CDH1-204ENST00000562118 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.47
CDH1-204ENST00000562118 CICQ96RK0 1608 aaPredicted RBP17.95■□□□□ 0.46
CDH1-204ENST00000562118 ANP32CO43423 234 aa17.95■□□□□ 0.46
CDH1-204ENST00000562118 TRIM37O94972 964 aa17.95■□□□□ 0.46
CDH1-204ENST00000562118 PTF1AQ7RTS3 328 aa17.95■□□□□ 0.46
CDH1-204ENST00000562118 U2AF1L5P0DN76 240 aaPredicted RBP17.94■□□□□ 0.46
CDH1-204ENST00000562118 PRKAR2BP31323 418 aa17.94■□□□□ 0.46
CDH1-204ENST00000562118 U2AF1Q01081 240 aaKnown RBP eCLIP17.94■□□□□ 0.46
CDH1-204ENST00000562118 MTHFSDQ2M296 383 aaKnown RBP17.94■□□□□ 0.46
CDH1-204ENST00000562118 PLSCR1O15162 318 aa17.93■□□□□ 0.46
CDH1-204ENST00000562118 KCNQ2O43526 872 aa17.93■□□□□ 0.46
CDH1-204ENST00000562118 HSP90AB1P08238 724 aaKnown RBP17.93■□□□□ 0.46
CDH1-204ENST00000562118 AKAP4Q5JQC9 854 aa17.93■□□□□ 0.46
CDH1-204ENST00000562118 ZNF530Q6P9A1 599 aaPredicted RBP17.93■□□□□ 0.46
CDH1-204ENST00000562118 PHACTR3Q96KR7 559 aa17.93■□□□□ 0.46
CDH1-204ENST00000562118 CCDC184Q52MB2 194 aa17.92■□□□□ 0.46
CDH1-204ENST00000562118 DCAF5Q96JK2 942 aa17.92■□□□□ 0.46
CDH1-204ENST00000562118 CAMKK2Q96RR4 588 aa17.92■□□□□ 0.46
CDH1-204ENST00000562118 CEMIPQ8WUJ3 1361 aa17.91■□□□□ 0.46
CDH1-204ENST00000562118 KAT6BQ8WYB5 2073 aa17.91■□□□□ 0.46
CDH1-204ENST00000562118 UBR2Q8IWV8 1755 aa17.91■□□□□ 0.46
CDH1-204ENST00000562118 MAP3K5Q99683 1374 aa17.91■□□□□ 0.46
CDH1-204ENST00000562118 ERVV-2B6SEH9 535 aa17.9■□□□□ 0.46
CDH1-204ENST00000562118 GAS2L2Q8NHY3 880 aa17.9■□□□□ 0.46
CDH1-204ENST00000562118 TAF1LQ8IZX4 1826 aa17.89■□□□□ 0.45
CDH1-204ENST00000562118 BAG6P46379 1132 aa17.89■□□□□ 0.45
CDH1-204ENST00000562118 PRIM1P49642 420 aaKnown RBP17.89■□□□□ 0.45
CDH1-204ENST00000562118 ACSBG1Q96GR2 724 aa17.89■□□□□ 0.45
CDH1-204ENST00000562118 DEFB132Q7Z7B7 95 aa17.88■□□□□ 0.45
CDH1-204ENST00000562118 APBA3O96018 575 aa17.87■□□□□ 0.45
CDH1-204ENST00000562118 SF3B2Q13435 895 aaKnown RBP17.87■□□□□ 0.45
CDH1-204ENST00000562118 C1orf141Q5JVX7 400 aa17.87■□□□□ 0.45
CDH1-204ENST00000562118 PNISRQ8TF01 805 aaKnown RBP17.87■□□□□ 0.45
CDH1-204ENST00000562118 PNNQ9H307 717 aaKnown RBP17.87■□□□□ 0.45
CDH1-204ENST00000562118 QSER1Q2KHR3 1735 aa17.86■□□□□ 0.45
CDH1-204ENST00000562118 PROM2Q8N271 834 aa17.86■□□□□ 0.45
CDH1-204ENST00000562118 ADAMTS8Q9UP79 889 aa17.86■□□□□ 0.45
CDH1-204ENST00000562118 RNMTO43148 476 aaKnown RBP17.85■□□□□ 0.45
CDH1-204ENST00000562118 HTATSF1O43719 755 aaKnown RBP17.85■□□□□ 0.45
CDH1-204ENST00000562118 C5P01031 1676 aa17.85■□□□□ 0.45
CDH1-204ENST00000562118 COL5A3P25940 1745 aaPredicted RBP17.85■□□□□ 0.45
CDH1-204ENST00000562118 PIGBQ92521 554 aa17.85■□□□□ 0.45
CDH1-204ENST00000562118 GNAT3A8MTJ3 354 aa17.84■□□□□ 0.45
CDH1-204ENST00000562118 EN1Q05925 392 aaPredicted RBP17.84■□□□□ 0.45
CDH1-204ENST00000562118 KDM3BQ7LBC6 1761 aa17.84■□□□□ 0.45
CDH1-204ENST00000562118 KCPQ6ZWJ8 1503 aa17.83■□□□□ 0.45
CDH1-204ENST00000562118 WDR43Q15061 677 aaKnown RBP eCLIP17.83■□□□□ 0.44
CDH1-204ENST00000562118 EZH2Q15910 746 aaKnown RBP17.83■□□□□ 0.44
CDH1-204ENST00000562118 NFE2L2Q16236 605 aa17.83■□□□□ 0.44
CDH1-204ENST00000562118 MPRIPQ6WCQ1 1025 aa17.83■□□□□ 0.44
CDH1-204ENST00000562118 IL17REQ8NFR9 667 aa17.83■□□□□ 0.44
CDH1-204ENST00000562118 LGR6Q9HBX8 967 aa17.83■□□□□ 0.44
CDH1-204ENST00000562118 TJP1Q07157 1748 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms