RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 CHD2O14647 1828 aaKnown RBP22.94■■□□□ 1.26
BBS4-204ENST00000562084 FAM135BQ49AJ0 1406 aa22.93■■□□□ 1.26
BBS4-204ENST00000562084 PTPRUQ92729 1446 aa22.93■■□□□ 1.26
BBS4-204ENST00000562084 MCTP1Q6DN14 999 aa22.92■■□□□ 1.26
BBS4-204ENST00000562084 RBM42Q9BTD8 480 aaKnown RBP22.92■■□□□ 1.26
BBS4-204ENST00000562084 LRRC7Q96NW7 1537 aa22.91■■□□□ 1.26
BBS4-204ENST00000562084 INTS3Q68E01 1043 aaKnown RBP22.91■■□□□ 1.26
BBS4-204ENST00000562084 CAVIN1Q6NZI2 390 aaKnown RBP22.91■■□□□ 1.26
BBS4-204ENST00000562084 API5Q9BZZ5 524 aaKnown RBP22.91■■□□□ 1.26
BBS4-204ENST00000562084 ZKSCAN5Q9Y2L8 839 aa22.91■■□□□ 1.26
BBS4-204ENST00000562084 ST18O60284 1047 aa22.9■■□□□ 1.26
BBS4-204ENST00000562084 CCDC39Q9UFE4 941 aa22.9■■□□□ 1.26
BBS4-204ENST00000562084 STRCP1A6NGW2 1772 aa22.9■■□□□ 1.26
BBS4-204ENST00000562084 VAMP4O75379 141 aa22.9■■□□□ 1.26
BBS4-204ENST00000562084 DYNC1I1O14576 645 aa22.89■■□□□ 1.25
BBS4-204ENST00000562084 GNAI1P63096 354 aa22.89■■□□□ 1.25
BBS4-204ENST00000562084 CASC1Q6TDU7 716 aa22.89■■□□□ 1.25
BBS4-204ENST00000562084 CABP2Q9NPB3 220 aa22.89■■□□□ 1.25
BBS4-204ENST00000562084 IFT57Q9NWB7 429 aa22.89■■□□□ 1.25
BBS4-204ENST00000562084 TTC22Q5TAA0 569 aa22.88■■□□□ 1.25
BBS4-204ENST00000562084 SIRT2Q8IXJ6 389 aa22.88■■□□□ 1.25
BBS4-204ENST00000562084 USP26Q9BXU7 913 aa22.88■■□□□ 1.25
BBS4-204ENST00000562084 RBSNQ9H1K0 784 aa22.88■■□□□ 1.25
BBS4-204ENST00000562084 STK26Q9P289 416 aa22.88■■□□□ 1.25
BBS4-204ENST00000562084 AMOTL2Q9Y2J4 779 aa22.88■■□□□ 1.25
BBS4-204ENST00000562084 YTHDC2Q9H6S0 1430 aaKnown RBP22.88■■□□□ 1.25
BBS4-204ENST00000562084 ZNF335Q9H4Z2 1342 aaPredicted RBP22.88■■□□□ 1.25
BBS4-204ENST00000562084 FYB1O15117 783 aa22.88■■□□□ 1.25
BBS4-204ENST00000562084 PLEKHM2Q8IWE5 1019 aa22.88■■□□□ 1.25
BBS4-204ENST00000562084 KIF20BQ96Q89 1820 aa22.87■■□□□ 1.25
BBS4-204ENST00000562084 MBD3O95983 291 aa22.87■■□□□ 1.25
BBS4-204ENST00000562084 KCNA6P17658 529 aa22.87■■□□□ 1.25
BBS4-204ENST00000562084 LRSAM1Q6UWE0 723 aa22.87■■□□□ 1.25
BBS4-204ENST00000562084 GGNBP2Q9H3C7 697 aa22.87■■□□□ 1.25
BBS4-204ENST00000562084 XRN1Q8IZH2 1706 aaKnown RBP22.86■■□□□ 1.25
BBS4-204ENST00000562084 GSPT1P15170 499 aaKnown RBP22.86■■□□□ 1.25
BBS4-204ENST00000562084 DCTPP1Q9H773 170 aa22.86■■□□□ 1.25
BBS4-204ENST00000562084 R3HCC1Q9Y3T6 440 aaKnown RBP22.86■■□□□ 1.25
BBS4-204ENST00000562084 NCLP19338 710 aaKnown RBP22.85■■□□□ 1.25
BBS4-204ENST00000562084 NFE2L2Q16236 605 aa22.85■■□□□ 1.25
BBS4-204ENST00000562084 NWD1Q149M9 1564 aa22.85■■□□□ 1.25
BBS4-204ENST00000562084 CD163L1Q9NR16 1453 aa22.84■■□□□ 1.25
BBS4-204ENST00000562084 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.84■■□□□ 1.25
BBS4-204ENST00000562084 KNDC1Q76NI1 1749 aa22.83■■□□□ 1.25
BBS4-204ENST00000562084 PRIM1P49642 420 aaKnown RBP22.83■■□□□ 1.24
BBS4-204ENST00000562084 SASS6Q6UVJ0 657 aa22.83■■□□□ 1.24
BBS4-204ENST00000562084 HDGFL2Q7Z4V5 671 aaPredicted RBP22.83■■□□□ 1.24
BBS4-204ENST00000562084 UQCRHLA0A096LP55 91 aa22.82■■□□□ 1.24
BBS4-204ENST00000562084 REC8O95072 547 aa22.82■■□□□ 1.24
BBS4-204ENST00000562084 UQCRHP07919 91 aa22.82■■□□□ 1.24
BBS4-204ENST00000562084 ZNF853P0CG23 659 aa22.82■■□□□ 1.24
BBS4-204ENST00000562084 SRPK2P78362 688 aaKnown RBP22.82■■□□□ 1.24
BBS4-204ENST00000562084 LMOD3Q0VAK6 560 aa22.82■■□□□ 1.24
BBS4-204ENST00000562084 C1orf115Q9H7X2 142 aa22.82■■□□□ 1.24
BBS4-204ENST00000562084 TECPR2O15040 1411 aa22.8■■□□□ 1.24
BBS4-204ENST00000562084 PRKAR2BP31323 418 aa22.8■■□□□ 1.24
BBS4-204ENST00000562084 MCM2P49736 904 aa22.8■■□□□ 1.24
BBS4-204ENST00000562084 GPT2Q8TD30 523 aa22.8■■□□□ 1.24
BBS4-204ENST00000562084 ROBO2Q9HCK4 1378 aa22.79■■□□□ 1.24
BBS4-204ENST00000562084 PRPF40AO75400 957 aaKnown RBP22.79■■□□□ 1.24
BBS4-204ENST00000562084 HAP1P54257 671 aaPredicted RBP22.79■■□□□ 1.24
BBS4-204ENST00000562084 AK9Q5TCS8 1911 aa22.79■■□□□ 1.24
BBS4-204ENST00000562084 RPAP2Q8IXW5 612 aaPredicted RBP22.79■■□□□ 1.24
BBS4-204ENST00000562084 SMAP1Q8IYB5 467 aaPredicted RBP22.79■■□□□ 1.24
BBS4-204ENST00000562084 CPS1P31327 1500 aa22.79■■□□□ 1.24
BBS4-204ENST00000562084 FAM13BQ9NYF5 915 aa22.78■■□□□ 1.24
BBS4-204ENST00000562084 DLC1Q96QB1 1528 aa22.78■■□□□ 1.24
BBS4-204ENST00000562084 SYAP1Q96A49 352 aaPredicted RBP22.77■■□□□ 1.24
BBS4-204ENST00000562084 LTBP4Q8N2S1 1624 aa22.77■■□□□ 1.24
BBS4-204ENST00000562084 RBM10P98175 930 aaKnown RBP22.77■■□□□ 1.24
BBS4-204ENST00000562084 TWISTNBQ3B726 338 aaPredicted RBP22.77■■□□□ 1.24
BBS4-204ENST00000562084 WAPLQ7Z5K2 1190 aa22.77■■□□□ 1.24
BBS4-204ENST00000562084 ANKRD44Q8N8A2 993 aa22.77■■□□□ 1.24
BBS4-204ENST00000562084 XPCQ01831 940 aaPredicted RBP22.76■■□□□ 1.23
BBS4-204ENST00000562084 PROSER2Q86WR7 435 aaPredicted RBP22.76■■□□□ 1.23
BBS4-204ENST00000562084 CPSF1Q10570 1443 aaKnown RBP22.75■■□□□ 1.23
BBS4-204ENST00000562084 SIRT1Q96EB6 747 aa22.75■■□□□ 1.23
BBS4-204ENST00000562084 RBM33Q96EV2 1170 aaKnown RBP22.75■■□□□ 1.23
BBS4-204ENST00000562084 PRAM1Q96QH2 718 aa22.75■■□□□ 1.23
BBS4-204ENST00000562084 ZDHHC9Q9Y397 364 aa22.75■■□□□ 1.23
BBS4-204ENST00000562084 PHF14O94880 888 aa22.74■■□□□ 1.23
BBS4-204ENST00000562084 KLHL34Q8N239 644 aa22.74■■□□□ 1.23
BBS4-204ENST00000562084 MBIPQ9NS73 344 aa22.74■■□□□ 1.23
BBS4-204ENST00000562084 TMEM63CQ9P1W3 806 aa22.73■■□□□ 1.23
BBS4-204ENST00000562084 XIRP1Q702N8 1843 aaKnown RBP22.73■■□□□ 1.23
BBS4-204ENST00000562084 ERC2O15083 957 aa22.73■■□□□ 1.23
BBS4-204ENST00000562084 PKP1Q13835 747 aa22.73■■□□□ 1.23
BBS4-204ENST00000562084 TSPYL6Q8N831 410 aa22.73■■□□□ 1.23
BBS4-204ENST00000562084 ATP10DQ9P241 1426 aa22.72■■□□□ 1.23
BBS4-204ENST00000562084 KIAA2012Q0VF49 1180 aa22.72■■□□□ 1.23
BBS4-204ENST00000562084 SAFB2Q14151 953 aaKnown RBP eCLIP22.72■■□□□ 1.23
BBS4-204ENST00000562084 PRDM4Q9UKN5 801 aa22.72■■□□□ 1.23
BBS4-204ENST00000562084 ATP7BP35670 1465 aa22.72■■□□□ 1.23
BBS4-204ENST00000562084 SDSP20132 328 aa22.71■■□□□ 1.23
BBS4-204ENST00000562084 UVSSAQ2YD98 709 aa22.71■■□□□ 1.23
BBS4-204ENST00000562084 FAM184AQ8NB25 1140 aa22.71■■□□□ 1.23
BBS4-204ENST00000562084 TSPY26PQ9H489 355 aa22.71■■□□□ 1.23
BBS4-204ENST00000562084 RBM27Q9P2N5 1060 aaKnown RBP22.71■■□□□ 1.23
BBS4-204ENST00000562084 CDK12Q9NYV4 1490 aaPredicted RBP22.71■■□□□ 1.23
BBS4-204ENST00000562084 SYCE3A1L190 88 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms