RNA–Protein interactions for RNA: ENST00000562070.1

RPUSD1-203, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-203ENST00000562070 KCNQ4P56696 695 aa19.64■□□□□ 0.73
RPUSD1-203ENST00000562070 RRS1Q15050 365 aaKnown RBP19.64■□□□□ 0.73
RPUSD1-203ENST00000562070 ZCRB1Q8TBF4 217 aaKnown RBP19.64■□□□□ 0.73
RPUSD1-203ENST00000562070 NSD2O96028 1365 aa19.64■□□□□ 0.73
RPUSD1-203ENST00000562070 TUBGCP6Q96RT7 1819 aa19.63■□□□□ 0.73
RPUSD1-203ENST00000562070 LY75O60449 1722 aa19.63■□□□□ 0.73
RPUSD1-203ENST00000562070 PNPLA7Q6ZV29 1317 aa19.63■□□□□ 0.73
RPUSD1-203ENST00000562070 GGNBP2Q9H3C7 697 aa19.63■□□□□ 0.73
RPUSD1-203ENST00000562070 SMG6Q86US8 1419 aaKnown RBP19.62■□□□□ 0.73
RPUSD1-203ENST00000562070 USP47Q96K76 1375 aa19.62■□□□□ 0.73
RPUSD1-203ENST00000562070 TMF1P82094 1093 aa19.62■□□□□ 0.73
RPUSD1-203ENST00000562070 ZNF784Q8NCA9 323 aaPredicted RBP19.62■□□□□ 0.73
RPUSD1-203ENST00000562070 SLC16A10Q8TF71 515 aa19.62■□□□□ 0.73
RPUSD1-203ENST00000562070 TFCP2L1Q9NZI6 479 aa19.62■□□□□ 0.73
RPUSD1-203ENST00000562070 FYB1O15117 783 aa19.61■□□□□ 0.73
RPUSD1-203ENST00000562070 KLHL34Q8N239 644 aa19.61■□□□□ 0.73
RPUSD1-203ENST00000562070 USHBP1Q8N6Y0 703 aa19.61■□□□□ 0.73
RPUSD1-203ENST00000562070 POLD1P28340 1107 aa19.6■□□□□ 0.73
RPUSD1-203ENST00000562070 NBPF6Q5VWK0 638 aa19.6■□□□□ 0.73
RPUSD1-203ENST00000562070 NBPF4Q96M43 638 aa19.6■□□□□ 0.73
RPUSD1-203ENST00000562070 CHD4Q14839 1912 aa19.6■□□□□ 0.73
RPUSD1-203ENST00000562070 TRIM26Q12899 539 aaPredicted RBP19.59■□□□□ 0.73
RPUSD1-203ENST00000562070 CCNL1Q9UK58 526 aaPredicted RBP19.59■□□□□ 0.73
RPUSD1-203ENST00000562070 KIF20BQ96Q89 1820 aa19.59■□□□□ 0.73
RPUSD1-203ENST00000562070 COL24A1Q17RW2 1714 aa19.59■□□□□ 0.73
RPUSD1-203ENST00000562070 RAPGEF4Q8WZA2 1011 aa19.58■□□□□ 0.72
RPUSD1-203ENST00000562070 CGNL1Q0VF96 1302 aa19.57■□□□□ 0.72
RPUSD1-203ENST00000562070 GPR162Q16538 588 aa19.57■□□□□ 0.72
RPUSD1-203ENST00000562070 INSRP06213 1382 aa19.56■□□□□ 0.72
RPUSD1-203ENST00000562070 TATP17735 454 aaPredicted RBP19.55■□□□□ 0.72
RPUSD1-203ENST00000562070 HSP90AB2PQ58FF8 381 aa19.55■□□□□ 0.72
RPUSD1-203ENST00000562070 FLT4P35916 1363 aa19.55■□□□□ 0.72
RPUSD1-203ENST00000562070 MSH5O43196 834 aa19.54■□□□□ 0.72
RPUSD1-203ENST00000562070 PCDH11XQ9BZA7 1347 aa19.53■□□□□ 0.72
RPUSD1-203ENST00000562070 PCDH11YQ9BZA8 1340 aa19.53■□□□□ 0.72
RPUSD1-203ENST00000562070 CDCA8Q53HL2 280 aa19.53■□□□□ 0.72
RPUSD1-203ENST00000562070 PELP1Q8IZL8 1130 aaKnown RBP19.53■□□□□ 0.72
RPUSD1-203ENST00000562070 NLGN2Q8NFZ4 835 aa19.52■□□□□ 0.72
RPUSD1-203ENST00000562070 KIF24Q5T7B8 1368 aa19.52■□□□□ 0.72
RPUSD1-203ENST00000562070 C5P01031 1676 aa19.52■□□□□ 0.71
RPUSD1-203ENST00000562070 NSD3Q9BZ95 1437 aa19.51■□□□□ 0.71
RPUSD1-203ENST00000562070 COL23A1Q86Y22 540 aaPredicted RBP19.51■□□□□ 0.71
RPUSD1-203ENST00000562070 PALLDQ8WX93 1383 aa19.49■□□□□ 0.71
RPUSD1-203ENST00000562070 TOGARAM1Q9Y4F4 1720 aa19.49■□□□□ 0.71
RPUSD1-203ENST00000562070 MSL1Q68DK7 614 aa19.49■□□□□ 0.71
RPUSD1-203ENST00000562070 CARD14Q9BXL6 1004 aa19.49■□□□□ 0.71
RPUSD1-203ENST00000562070 EMILIN1Q9Y6C2 1016 aa19.49■□□□□ 0.71
RPUSD1-203ENST00000562070 MPRIPQ6WCQ1 1025 aa19.48■□□□□ 0.71
RPUSD1-203ENST00000562070 PKD1L3Q7Z443 1732 aa19.48■□□□□ 0.71
RPUSD1-203ENST00000562070 GOLGB1Q14789 3259 aaKnown RBP19.47■□□□□ 0.71
RPUSD1-203ENST00000562070 CYP27B1O15528 508 aa19.47■□□□□ 0.71
RPUSD1-203ENST00000562070 TAF1LQ8IZX4 1826 aa19.46■□□□□ 0.71
RPUSD1-203ENST00000562070 PPM1GO15355 546 aaPredicted RBP19.46■□□□□ 0.71
RPUSD1-203ENST00000562070 ANKRD26Q9UPS8 1709 aa19.45■□□□□ 0.7
RPUSD1-203ENST00000562070 ITGB4P16144 1822 aa19.45■□□□□ 0.7
RPUSD1-203ENST00000562070 NCAPD2Q15021 1401 aa19.44■□□□□ 0.7
RPUSD1-203ENST00000562070 C4BP0C0L5 1744 aa19.43■□□□□ 0.7
RPUSD1-203ENST00000562070 C1QTNF8P60827 252 aa19.43■□□□□ 0.7
RPUSD1-203ENST00000562070 SENP3-EIF4A1A0A087X0R7 540 aa19.42■□□□□ 0.7
RPUSD1-203ENST00000562070 YBX3P16989 372 aaKnown RBP eCLIP19.42■□□□□ 0.7
RPUSD1-203ENST00000562070 HMGB2P26583 209 aaKnown RBP19.42■□□□□ 0.7
RPUSD1-203ENST00000562070 FLAD1Q8NFF5 587 aa19.42■□□□□ 0.7
RPUSD1-203ENST00000562070 SMARCC1Q92922 1105 aaPredicted RBP19.42■□□□□ 0.7
RPUSD1-203ENST00000562070 AK7Q96M32 723 aa19.41■□□□□ 0.7
RPUSD1-203ENST00000562070 GRIN3BO60391 1043 aa19.4■□□□□ 0.7
RPUSD1-203ENST00000562070 PIGBQ92521 554 aa19.4■□□□□ 0.7
RPUSD1-203ENST00000562070 SPG7Q9UQ90 795 aa19.4■□□□□ 0.7
RPUSD1-203ENST00000562070 WASHC2AQ641Q2 1341 aa19.4■□□□□ 0.7
RPUSD1-203ENST00000562070 GIGYF1O75420 1035 aaPredicted RBP19.39■□□□□ 0.69
RPUSD1-203ENST00000562070 MAP2P11137 1827 aaKnown RBP19.39■□□□□ 0.69
RPUSD1-203ENST00000562070 PHF14O94880 888 aa19.38■□□□□ 0.69
RPUSD1-203ENST00000562070 NKX1-1Q15270 411 aaPredicted RBP19.38■□□□□ 0.69
RPUSD1-203ENST00000562070 UBR3Q6ZT12 1888 aa19.38■□□□□ 0.69
RPUSD1-203ENST00000562070 AMIGO3Q86WK7 504 aa19.38■□□□□ 0.69
RPUSD1-203ENST00000562070 EYA1Q99502 592 aa19.38■□□□□ 0.69
RPUSD1-203ENST00000562070 POLR3GLQ9BT43 218 aa19.37■□□□□ 0.69
RPUSD1-203ENST00000562070 CD2APQ9Y5K6 639 aa19.37■□□□□ 0.69
RPUSD1-203ENST00000562070 SMIM5Q71RC9 77 aa19.36■□□□□ 0.69
RPUSD1-203ENST00000562070 TMOD3Q9NYL9 352 aa19.36■□□□□ 0.69
RPUSD1-203ENST00000562070 POLKQ9UBT6 870 aa19.36■□□□□ 0.69
RPUSD1-203ENST00000562070 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.35■□□□□ 0.69
RPUSD1-203ENST00000562070 LOC102724428A0A0B4J2F2 783 aa19.35■□□□□ 0.69
RPUSD1-203ENST00000562070 SIK1P57059 783 aa19.35■□□□□ 0.69
RPUSD1-203ENST00000562070 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.35■□□□□ 0.69
RPUSD1-203ENST00000562070 TIMELESSQ9UNS1 1208 aa19.35■□□□□ 0.69
RPUSD1-203ENST00000562070 TNNT2P45379 298 aaPredicted RBP19.34■□□□□ 0.69
RPUSD1-203ENST00000562070 LINC00116Q8NCU8 138 aa19.34■□□□□ 0.69
RPUSD1-203ENST00000562070 PCGF6Q9BYE7 350 aa19.34■□□□□ 0.69
RPUSD1-203ENST00000562070 PHKG2P15735 406 aa19.33■□□□□ 0.68
RPUSD1-203ENST00000562070 SSFA2P28290 1259 aa19.33■□□□□ 0.68
RPUSD1-203ENST00000562070 IFNL2Q8IZJ0 200 aa19.33■□□□□ 0.68
RPUSD1-203ENST00000562070 ASAP1Q9ULH1 1129 aa19.33■□□□□ 0.68
RPUSD1-203ENST00000562070 EIF4A2Q14240 407 aaKnown RBP19.32■□□□□ 0.68
RPUSD1-203ENST00000562070 ATP10DQ9P241 1426 aa19.32■□□□□ 0.68
RPUSD1-203ENST00000562070 ITPK1Q13572 414 aa19.31■□□□□ 0.68
RPUSD1-203ENST00000562070 GNPATO15228 680 aa19.3■□□□□ 0.68
RPUSD1-203ENST00000562070 ATP6V1AP38606 617 aa19.3■□□□□ 0.68
RPUSD1-203ENST00000562070 WWC3Q9ULE0 1092 aa19.3■□□□□ 0.68
RPUSD1-203ENST00000562070 IGSF1Q8N6C5 1336 aa19.29■□□□□ 0.68
RPUSD1-203ENST00000562070 ATG3Q9NT62 314 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms